MELO3C019818.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019818.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionDVL-like protein
Locationchr03: 22691444 .. 22691926 (-)
RNA-Seq ExpressionMELO3C019818.jh1
SyntenyMELO3C019818.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCACAACTCCAAAAACATCTTCTCCAACTAAATCCACTCTCTTCTTTTCTTTTTCCTCTCTAAAACAAAATCCATACAAAAGGAGAAGGGCATTGTAGTAAAATGACGGAAGAAGGAAGAAGGCTATGCAAGAGAACATCCTCCTCGGCTTGTAGTAGAAGATCCGGAACGGCGTCGTTTAAGCAGAGGTGTAGTTTGCTTGTGAAGGAACAAAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTCTGTTGGAATTACTATGCTGACCCTTGAAACTTTTTCTTTTTTTGTATATAGTTTCATTAGCCATAATTAACTTTGGAGGTTTTTATTTTTTTTTCTTTTAATTCTTATATTGGCCTAGCTACCTGTGATTGGGAAAGAACAAATAGATATATTCTATAGTATATTCCTTTGAAAATCTATACAAATTTTGGTATTTCAATTTTAGATCTCTTTAATTAATTAA

mRNA sequence

TCTCACAACTCCAAAAACATCTTCTCCAACTAAATCCACTCTCTTCTTTTCTTTTTCCTCTCTAAAACAAAATCCATACAAAAGGAGAAGGGCATTGTAGTAAAATGACGGAAGAAGGAAGAAGGCTATGCAAGAGAACATCCTCCTCGGCTTGTAGTAGAAGATCCGGAACGGCGTCGTTTAAGCAGAGGTGTAGTTTGCTTGTGAAGGAACAAAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTCTGTTGGAATTACTATGCTGACCCTTGAAACTTTTTCTTTTTTTGTATATAGTTTCATTAGCCATAATTAACTTTGGAGGTTTTTATTTTTTTTTCTTTTAATTCTTATATTGGCCTAGCTACCTGTGATTGGGAAAGAACAAATAGATATATTCTATAGTATATTCCTTTGAAAATCTATACAAATTTTGGTATTTCAATTTTAGATCTCTTTAATTAATTAA

Coding sequence (CDS)

ATGACGGAAGAAGGAAGAAGGCTATGCAAGAGAACATCCTCCTCGGCTTGTAGTAGAAGATCCGGAACGGCGTCGTTTAAGCAGAGGTGTAGTTTGCTTGTGAAGGAACAAAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTCTGTTGGAATTACTATGCTGACCCTTGA

Protein sequence

MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP
Homology
BLAST of MELO3C019818.jh1 vs. NCBI nr
Match: KAA0036490.1 (DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 2.78e-35
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP
Sbjct: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

BLAST of MELO3C019818.jh1 vs. NCBI nr
Match: KAE8647306.1 (hypothetical protein Csa_004317 [Cucumis sativus])

HSP 1 Score: 118 bits (295), Expect = 2.69e-33
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0

Query: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          MTEE RRLCKRT SSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP
Sbjct: 1  MTEERRRLCKRTPSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

BLAST of MELO3C019818.jh1 vs. NCBI nr
Match: KAG7016303.1 (hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106 bits (265), Expect = 1.11e-28
Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0

Query: 1  MTEEGRRLCK---RTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M EE RRLC+   R SSSACSRRS TASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY
Sbjct: 1  MMEERRRLCRGEVRDSSSACSRRSATASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

BLAST of MELO3C019818.jh1 vs. NCBI nr
Match: DAD26787.1 (TPA_asm: hypothetical protein HUJ06_028255 [Nelumbo nucifera])

HSP 1 Score: 67.8 bits (164), Expect = 2.29e-13
Identity = 36/60 (60.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          M E G   C R     C       SF QRCS LVKEQRARFYILRRCV+MLVCWN   DP
Sbjct: 1  MEESGTSFCSRHLRDPC------RSFGQRCSRLVKEQRARFYILRRCVIMLVCWNDCGDP 54

BLAST of MELO3C019818.jh1 vs. NCBI nr
Match: DAD28534.1 (TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera])

HSP 1 Score: 66.6 bits (161), Expect = 6.57e-13
Identity = 36/50 (72.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query: 13 SSSACSR--RSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          SSS C R  R    SF QRCS LVKEQRARFYILRRCV MLVCWN   DP
Sbjct: 5  SSSFCCRHLRDPCRSFGQRCSRLVKEQRARFYILRRCVTMLVCWNECGDP 54

BLAST of MELO3C019818.jh1 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-08
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 7  RLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW-NYYAD 60
          R    +SSS   ++ G  +F ++C+ LVKEQRARFYI+RRCV+ML+CW + Y+D
Sbjct: 33 RSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSD 86

BLAST of MELO3C019818.jh1 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-07
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0

Query: 19 RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 55
          ++ G   F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 33 QKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

BLAST of MELO3C019818.jh1 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.7e-06
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0

Query: 18  SRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 60
           S  S ++S  Q+ S L KEQ+ARFYI+RRCV MLVCW+ + D
Sbjct: 73  SSSSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

BLAST of MELO3C019818.jh1 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.7e-06
Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWN 56
          +F Q+CS +VK+QRA+FYILRRC+ MLVCW+
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

BLAST of MELO3C019818.jh1 vs. ExPASy Swiss-Prot
Match: Q6IM82 (Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-05
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 60
          +F  +C  LVKEQRAR YILRRC  ML CW  + D
Sbjct: 13 AFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

BLAST of MELO3C019818.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SZH0 (DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00410 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 1.35e-35
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP
Sbjct: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

BLAST of MELO3C019818.jh1 vs. ExPASy TrEMBL
Match: A0A438GPR3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_057277 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.73e-13
Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          M EE    C R  S+ C       SF +RCS LVKEQRARFYILRRCV MLVCW+   DP
Sbjct: 3  MNEESTSFCNRHVSNPC------RSFGRRCSRLVKEQRARFYILRRCVTMLVCWHECGDP 56

BLAST of MELO3C019818.jh1 vs. ExPASy TrEMBL
Match: A0A2C9V3J5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G049900 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.30e-12
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 10 KRTSSSACSR--RSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 59
          K+ ++S C+R  R    SF Q+CS LVKEQRA+FYILRRC+VML+CWN Y D
Sbjct: 2  KQENTSFCNRHVRDPCRSFGQKCSRLVKEQRAKFYILRRCIVMLICWNEYGD 53

BLAST of MELO3C019818.jh1 vs. ExPASy TrEMBL
Match: A0A3N7FP95 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.68e-12
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          SF +RCS LVKEQRARFYILRRCV MLVCW+ Y +P
Sbjct: 20 SFGRRCSSLVKEQRARFYILRRCVTMLVCWHEYGEP 55

BLAST of MELO3C019818.jh1 vs. ExPASy TrEMBL
Match: B9HLH7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 1.07e-11
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60
          SF +RCS LVKEQRARFYILRRCV MLVCW+ Y +P
Sbjct: 19 SFGRRCSSLVKEQRARFYILRRCVTMLVCWHDYGEP 54

BLAST of MELO3C019818.jh1 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-09
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 7  RLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW-NYYAD 60
          R    +SSS   ++ G  +F ++C+ LVKEQRARFYI+RRCV+ML+CW + Y+D
Sbjct: 33 RSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSD 86

BLAST of MELO3C019818.jh1 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 53.9 bits (128), Expect = 5.1e-08
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0

Query: 19 RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 55
          ++ G   F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 33 QKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

BLAST of MELO3C019818.jh1 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0

Query: 18  SRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 60
           S  S ++S  Q+ S L KEQ+ARFYI+RRCV MLVCW+ + D
Sbjct: 73  SSSSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

BLAST of MELO3C019818.jh1 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.3e-07
Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWN 56
          +F Q+CS +VK+QRA+FYILRRC+ MLVCW+
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

BLAST of MELO3C019818.jh1 vs. TAIR 10
Match: AT1G53708.1 (ROTUNDIFOLIA like 9 )

HSP 1 Score: 48.1 bits (113), Expect = 2.8e-06
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 0

Query: 25 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 60
          +F  +C+ LVKEQRAR YILRRC  ML CW    D
Sbjct: 13 AFTSKCASLVKEQRARLYILRRCATMLCCWYIQGD 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036490.12.78e-35100.00DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumi... [more]
KAE8647306.12.69e-3396.67hypothetical protein Csa_004317 [Cucumis sativus][more]
KAG7016303.11.11e-2887.30hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyro... [more]
DAD26787.12.29e-1360.00TPA_asm: hypothetical protein HUJ06_028255 [Nelumbo nucifera][more]
DAD28534.16.57e-1372.00TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera][more]
Match NameE-valueIdentityDescription
Q8S8S33.8e-0851.85Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1[more]
Q6IM937.2e-0763.89Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1[more]
Q8L7D02.7e-0657.14Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1[more]
Q7XXN84.7e-0667.74Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1[more]
Q6IM824.0e-0560.00Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7SZH01.35e-35100.00DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G004... [more]
A0A438GPR36.73e-1358.33Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_057277 PE=4 SV=1[more]
A0A2C9V3J51.30e-1261.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G049900 PE=4 SV=... [more]
A0A3N7FP957.68e-1277.78Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 ... [more]
B9HLH71.07e-1177.78Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT2G39705.12.7e-0951.85ROTUNDIFOLIA like 8 [more]
AT3G55515.15.1e-0863.89ROTUNDIFOLIA like 7 [more]
AT2G29125.11.9e-0757.14ROTUNDIFOLIA like 2 [more]
AT2G36985.13.3e-0767.74DVL family protein [more]
AT1G53708.12.8e-0660.00ROTUNDIFOLIA like 9 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 35..53
e-value: 6.9E-13
score: 48.1
NoneNo IPR availablePANTHERPTHR33102DVL19-RELATED-RELATEDcoord: 10..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019818.jh1.t1MELO3C019818.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008285 negative regulation of cell population proliferation