MELO3C019795 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019795
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr03: 22393700 .. 22393984 (+)
RNA-Seq Expression	MELO3C019795
Synteny	MELO3C019795

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTAAGAGTAAAGATGCAAAATGCTATCACTTCTAAGCTACGTCCATCTATTAAACTGGTAAGTAGATACACAGAGGAAAAAGAGTTAAAAAGGTTACCAACGCCATTGATTATTTATTTGAAGCATGAAAAGGAATTTGTCGTTACTGTAGTAAGTGGCATGCACAGTGAAGGCACTGTTCTGAGTGGGTCAGAAGGAACGAACGACAAAGGTACGGAAGCAACCAAAGGCAATGGCAAGTGGGTAGGCGGTGGTGCCCAACTCAGGCGGAGCCGCTGA

mRNA sequence

ATGGCCGTAAGAGTAAAGATGCAAAATGCTATCACTTCTAAGCTACGTCCATCTATTAAACTGGTAAGTAGATACACAGAGGAAAAAGAGTTAAAAAGGTTACCAACGCCATTGATTATTTATTTGAAGCATGAAAAGGAATTTGTCGTTACTGTAGTAAGTGGCATGCACAGTGAAGGCACTGTTCTGAGTGGGTCAGAAGGAACGAACGACAAAGGTACGGAAGCAACCAAAGGCAATGGCAAGTGGGTAGGCGGTGGTGCCCAACTCAGGCGGAGCCGCTGA

Coding sequence (CDS)

ATGGCCGTAAGAGTAAAGATGCAAAATGCTATCACTTCTAAGCTACGTCCATCTATTAAACTGGTAAGTAGATACACAGAGGAAAAAGAGTTAAAAAGGTTACCAACGCCATTGATTATTTATTTGAAGCATGAAAAGGAATTTGTCGTTACTGTAGTAAGTGGCATGCACAGTGAAGGCACTGTTCTGAGTGGGTCAGAAGGAACGAACGACAAAGGTACGGAAGCAACCAAAGGCAATGGCAAGTGGGTAGGCGGTGGTGCCCAACTCAGGCGGAGCCGCTGA

Protein sequence

MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEGTVLSGSEGTNDKGTEATKGNGKWVGGGAQLRRSR

Homology

[Close]

BLAST of MELO3C019795 vs. NCBI nr
Match: KAA0036463.1 (putative aquaporin PIP2-5 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60
          MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG
Sbjct: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60

Query: 61 TVLSGSEGTNDKGTEATKGNGKW 84
          TVLSGSEGTNDKGTEATKGNGKW
Sbjct: 61 TVLSGSEGTNDKGTEATKGNGKW 83

[Close]

BLAST of MELO3C019795 vs. NCBI nr
Match: TYK00024.1 (putative aquaporin PIP2-5 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60
          MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG
Sbjct: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60

Query: 61 TVLSGSEGTNDKGTEATKGNGKW 84
          TVLSGSEGTNDKGTEATKGNGKW
Sbjct: 61 TVLSGSEGTNDKGTEATKGNGKW 83

[Close]

BLAST of MELO3C019795 vs. NCBI nr
Match: KGN47820.1 (hypothetical protein Csa_004346 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 38 LIIYLKHEKEFVVTVVSGMHSEGTVLSGSEGTNDKGTEATKGNGKWVGGGAQLRRSR 95
          + + +K +   +++ V  ++ EGTVLS SEGT+DKGTEATKGNGKW+G GAQLRRSR
Sbjct: 1  MAVRVKMQMLSLLSYVHLLNCEGTVLSRSEGTSDKGTEATKGNGKWIGSGAQLRRSR 57

[Close]

BLAST of MELO3C019795 vs. ExPASy TrEMBL
Match: A0A5D3BL63 (Putative aquaporin PIP2-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00690 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.2e-36
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60
          MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG
Sbjct: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60

Query: 61 TVLSGSEGTNDKGTEATKGNGKW 84
          TVLSGSEGTNDKGTEATKGNGKW
Sbjct: 61 TVLSGSEGTNDKGTEATKGNGKW 83

[Close]

BLAST of MELO3C019795 vs. ExPASy TrEMBL
Match: A0A5A7T0Q3 (Putative aquaporin PIP2-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold147G00320 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.2e-36
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60
          MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG
Sbjct: 1  MAVRVKMQNAITSKLRPSIKLVSRYTEEKELKRLPTPLIIYLKHEKEFVVTVVSGMHSEG 60

Query: 61 TVLSGSEGTNDKGTEATKGNGKW 84
          TVLSGSEGTNDKGTEATKGNGKW
Sbjct: 61 TVLSGSEGTNDKGTEATKGNGKW 83

[Close]

BLAST of MELO3C019795 vs. ExPASy TrEMBL
Match: A0A0A0KDN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405330 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.1e-08
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 38 LIIYLKHEKEFVVTVVSGMHSEGTVLSGSEGTNDKGTEATKGNGKWVGGGAQLRRSR 95
          + + +K +   +++ V  ++ EGTVLS SEGT+DKGTEATKGNGKW+G GAQLRRSR
Sbjct: 1  MAVRVKMQMLSLLSYVHLLNCEGTVLSRSEGTSDKGTEATKGNGKWIGSGAQLRRSR 57

The following BLAST results are available for this feature:

BLAST of MELO3C019795 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036463.1	1.9e-35	100.00	putative aquaporin PIP2-5 [Cucumis melo var. makuwa]	[more]
TYK00024.1	1.9e-35	100.00	putative aquaporin PIP2-5 [Cucumis melo var. makuwa]	[more]
KGN47820.1	1.7e-07	59.65	hypothetical protein Csa_004346 [Cucumis sativus]	[more]

BLAST of MELO3C019795 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BL63	9.2e-36	100.00	Putative aquaporin PIP2-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7T0Q3	9.2e-36	100.00	Putative aquaporin PIP2-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KDN2	8.1e-08	59.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405330 PE=4 SV=1	[more]

BLAST of MELO3C019795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019795.1	MELO3C019795.1	mRNA