MELO3C019546.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019546.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	PRKR-interacting protein 1
Location	chr06: 12411163 .. 12413671 (-)
RNA-Seq Expression	MELO3C019546.jh1
Synteny	MELO3C019546.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTCCAAATAAACCAACAAATAGCCGAAAAACGCAAAAAGCACAACTTTGAATTCGTACGGCGCCGGTGAGCCATAGACCTACTGCTCTGCGACGGTCGACAGAGATGAAGTTAAAGTATCGGCGATTCACTTGAAGGTGGAAGAAACATAGCCGCTTCAGTTACCATTAGAGCTTCTTCGAGTTTATTGAGGAAATTTTTGCAATTAGGGTTTTAGGGTTTCTGGAATACCATGTCAACCGGCAAGCTGAAGGACGGGGAACGTCGGCTGGTGATCCCAATGCCTCCCAAACCAAAACCCGAAACGCAATTGGCCACGACTGAGTCTAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAAGATTTGGAGGTCAAGCTTCGGAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTCGAGTGGATTATCTTGTTTTATATTGCGTAGATTTTCTTCTGGGGTTGATTCTTGTTGATGACTTTTGTTCTCGTATTACTTTGTGGGATATTTTTTCGATGAATGTTTGATGCATTGATGGAAAACTTGTAATGCATTACTTGAAGTGGTTATTGACGAAGTATGAAATGTATCTTAAGCCTTGGGATGTGCTAACAAACTTGTTTCCGGACATTTTTTATCATTCGAGTTATTGAGGGAGCAAAGGATGATGAGTGGAAGGACTTTTTATCGGGGGGAAATAGGTAGGGTGTGAACAACAGGGGAGTTGAATGAAGTTTGATGTCTCTTATTTTGATGGGAATTTGAGTATTGAAAATTCCTAGATTGGGTTATTGGCTCATGGAACAGTTATTTCAATCTATGGGCATCTGCAAAGAAATGCCTTAGAACTCAAGGACTCGGTTGTGCGACCTGTAGAATTGACCTTGTTCAAGTGAGGTTGTGACATTTGTAAAGAAAATCGGTGTACAAATTGAAAGAGCGAAGCTCAGGCCCTAGGGTTGATGAAACAATTGCAAAAGCATTCTTGAAAAAGGTAGAAATTAGATGAATACATGGCAAAAAAGACAACCTACATTGTAGGAGTAAAACTAGGATGTAGTTAGATTACTTTGATTAATTGTTTCATGTTTGTAGGTAATAGGAAAATTGGGGCATCTAGTTTATGTTCGGAATGGTGTGGTATTTGAAGAGAAAGGCAAGATTTTACTAGATGCCTGCCATGTTAAAAAACAAGGAAACTATCCACCAATAAATTTGGATGGATCTAGAATTGTGGATTTACCTTAAAGTGGGATGCCCAGTGTTTCATTTTAATAATCTTGTAAACTTTCGAGTGAAAGATCATACATTTGATAAAATTTTCTGGTGACGTAATGAATTAATCTTATTCTCACACAGTGAGAGGTAGAAATGTGCTGGAGTAATGTTGTGTTCCATGCACCCACATTTTCATATGATATAACTATGATCGTCTCCTACAAAATCAAGTCACTATACTATGGTTATTATCACTCAGGTTTTTGTGGTAGAGCGCGTCAATTGACCATGGAGTAACAGTAGTATGGAGATGAATTCTCTGTTTGCAACAATACTTTTGAAATTTTGGCCAATGGAGTAACAGTAGAGTGCTTTTGTTTATTTTCCCATTTCATCTAAGAAAGGCTAGTGTCATTTAAAGTGACAGGACGGCATACAGGTTTATGAAAATACTATTTGAAATAAAAATGCTCTTTAGTCTGATGTTAAATTGGTTTTCCATATTTTAAGGAGTCAGGAAAATTCATATTTTAATATGTTGGAATCGATCCTTTTCAACCTGGTTTAATGTTACTGGTATTTAGGAAAGAAAGTCTCCACTTGTGTGGTTAAGTCTACACTTTTTACTTCAGAATGCATTAGATCTTTTTGCTTACCTTTAATCTATTTTTATTCCTCTCCATCCTTAATAAATAGCAGCTATTCTTGAGTTTATGGTAATGTCTCAATCCTTGGATTATGTAGTAATGTCTGCTTGTTCCATAAAATTTTCAAATGGCAGTATCGACAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGATGTTGATTATCAAAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAAATGAATTCAGGTGAAGATGAGAATCAGAAAGAAGAATCCTCTGATGATGAAGGGGATACAGATAAGGGTGAGGATGAAGCAACATGACTGGATCTTTCCTACCTGGAATCGAAGTTTAAAGTTTGAACTTTTCACCCCAGGCCTTTCCAGATGAGCATCGAACCAGATGACAGCCACGAGTTTGCATACCTGACATTTTGCTGGTTTGCAATTCCTTATGAGCCGTTGTAGTACCTGGATCTGTTAGCTTTTGT

mRNA sequence

AAAACTCCAAATAAACCAACAAATAGCCGAAAAACGCAAAAAGCACAACTTTGAATTCGTACGGCGCCGGTGAGCCATAGACCTACTGCTCTGCGACGGTCGACAGAGATGAAGTTAAAGTATCGGCGATTCACTTGAAGGTGGAAGAAACATAGCCGCTTCAGTTACCATTAGAGCTTCTTCGAGTTTATTGAGGAAATTTTTGCAATTAGGGTTTTAGGGTTTCTGGAATACCATGTCAACCGGCAAGCTGAAGGACGGGGAACGTCGGCTGGTGATCCCAATGCCTCCCAAACCAAAACCCGAAACGCAATTGGCCACGACTGAGTCTAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAAGATTTGGAGGTCAAGCTTCGGAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATCGACAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGATGTTGATTATCAAAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAAATGAATTCAGGTGAAGATGAGAATCAGAAAGAAGAATCCTCTGATGATGAAGGGGATACAGATAAGGGTGAGGATGAAGCAACATGACTGGATCTTTCCTACCTGGAATCGAAGTTTAAAGTTTGAACTTTTCACCCCAGGCCTTTCCAGATGAGCATCGAACCAGATGACAGCCACGAGTTTGCATACCTGACATTTTGCTGGTTTGCAATTCCTTATGAGCCGTTGTAGTACCTGGATCTGTTAGCTTTTGT

Coding sequence (CDS)

ATGTCAACCGGCAAGCTGAAGGACGGGGAACGTCGGCTGGTGATCCCAATGCCTCCCAAACCAAAACCCGAAACGCAATTGGCCACGACTGAGTCTAACGCGCTTGTGGAATATACGCCGCCGGTGAAGGAGGAGGATGAAGATTTGGAGGTCAAGCTTCGGAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATCGACAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGATGTTGATTATCAAAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACTGCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAAATGAATTCAGGTGAAGATGAGAATCAGAAAGAAGAATCCTCTGATGATGAAGGGGATACAGATAAGGGTGAGGATGAAGCAACATGA

Protein sequence

MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT

Homology

[Close]

BLAST of MELO3C019546.jh1 vs. NCBI nr
Match: XP_008456169.1 (PREDICTED: PRKR-interacting protein 1 [Cucumis melo])

HSP 1 Score: 303 bits (775), Expect = 5.79e-103
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172
           EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172

[Close]

BLAST of MELO3C019546.jh1 vs. NCBI nr
Match: XP_011651236.1 (PRKR-interacting protein 1 [Cucumis sativus] >KGN57498.1 hypothetical protein Csa_011493 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 2.26e-100
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKP+TQLAT ESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172
           EERT+KKRLKRQKKKQRRKEKRSK+NSGEDENQK+ESSDDEGDTDKGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]

BLAST of MELO3C019546.jh1 vs. NCBI nr
Match: XP_038886372.1 (PRKR-interacting protein 1 [Benincasa hispida])

HSP 1 Score: 286 bits (731), Expect = 2.95e-96
Identity = 161/172 (93.60%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG++KDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGRVKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKE+AEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKELAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172
           EERTAKKRLKRQKKKQRRKEKRSK+NSG DE+QK+ESSDD+GDTD GE+ AT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKLNSGGDEDQKDESSDDDGDTDNGENNAT 172

[Close]

BLAST of MELO3C019546.jh1 vs. NCBI nr
Match: TYK13889.1 (PRKR-interacting protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (715), Expect = 4.31e-93
Identity = 172/221 (77.83%), Postives = 172/221 (77.83%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQ--------------------------------------- 120
           PVRVSNTSGSSAGSGSGDFHQ                                       
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQIGLLAHGTVISIYGHLQRNALELKDSVVRPVELTLFNNV 120

Query: 121 ----------YRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR 172
                     YRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR
Sbjct: 121 CLFHKIFKWQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR 180

[Close]

BLAST of MELO3C019546.jh1 vs. NCBI nr
Match: XP_022941948.1 (PRKR-interacting protein 1 [Cucurbita moschata])

HSP 1 Score: 275 bits (703), Expect = 5.63e-92
Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNS-GEDENQKEESSDDEGDTDKGEDEAT 172
           EERT+KKRLKRQKKKQRRKEK+SK+NS G DENQK+ SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 173

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot
Match: Q9CWV6 (PRKR-interacting protein 1 OS=Mus musculus OX=10090 GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08
Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 0


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQK--------KKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDE 171
           AEE+TAK+R KRQK        KK + ++K+ K    + + Q   SSD+  +T++ E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEEE 178

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot
Match: Q2KIT1 (PRKR-interacting protein 1 OS=Bos taurus OX=9913 GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 64/173 (36.99%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 173
           AEE+TAK+R KRQK K+  K+  +K    E + Q E SS+ +     G +EA+
Sbjct: 131 AEEQTAKRRKKRQKLKE--KKLLAKKMKLEQKKQSEASSETQEQPSSGSEEAS 170

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot
Match: Q9H875 (PRKR-interacting protein 1 OS=Homo sapiens OX=9606 GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 61/177 (34.46%), Postives = 90/177 (50.85%), Query Frame = 0


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQKKKQR-------RKEKRSKMNSGEDENQKEESSDDEGDTDKGED 170
           AEE+TAK+R KRQK K++       + E++ +   G+ + Q   SS +   T++ E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot
Match: Q5R5J3 (PRKR-interacting protein 1 OS=Pongo abelii OX=9601 GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 61/177 (34.46%), Postives = 90/177 (50.85%), Query Frame = 0


Query: 18  PPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK E Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTAKKRLKRQKKKQR-------RKEKRSKMNSGEDENQKEESSDDEGDTDKGED 170
           AEE+TAK+R KRQK K++       + E++ +   G+ + Q   SS +   T++ E+
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot
Match: Q5ZKU0 (PRKR-interacting protein 1 homolog OS=Gallus gallus OX=9031 GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 16  PMPPKPKPETQLATTESNALVEYTPPVK------EEDEDLEVKLRRIIDNVPVR-VSNTS 75
           P PP+P+ E Q      NA  E    ++      E+   +  KL       P   V +  
Sbjct: 7   PRPPRPRKEPQPLVIPRNAAEEQRLRLERLMRNPEKTVPIPEKLNEWAPRPPPEFVRDVM 66

Query: 76  GSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKR 135
           GSSAG+GSG+FH YR +RR+E  R   MD   +K++   EF  + E     AEE+TAK+R
Sbjct: 67  GSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTAKRR 126

Query: 136 LKRQKKKQRR------KEKRSKMNSGEDENQKEESSDDEGDTDKGEDE 171
            KRQK K+++      K ++ K     D++Q+  SS+D+ +  K E+E
Sbjct: 127 RKRQKLKEKKLQAKKNKLEQKKQEKESDQSQERVSSEDDEEDSKEEEE 174

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C2Q3 (PRKR-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103496186 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 2.80e-103
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172
           EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L705 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.09e-100
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKP+TQLAT ESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKEESSDDEGDTDKGEDEAT 172
           EERT+KKRLKRQKKKQRRKEKRSK+NSGEDENQK+ESSDDEGDTDKGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT 172

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CUJ1 (PRKR-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00780 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 2.09e-93
Identity = 172/221 (77.83%), Postives = 172/221 (77.83%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQ--------------------------------------- 120
           PVRVSNTSGSSAGSGSGDFHQ                                       
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQIGLLAHGTVISIYGHLQRNALELKDSVVRPVELTLFNNV 120

Query: 121 ----------YRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR 172
                     YRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR
Sbjct: 121 CLFHKIFKWQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTAKKRLKR 180

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FTH7 (PRKR-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447158 PE=4 SV=1)

HSP 1 Score: 275 bits (703), Expect = 2.73e-92
Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNS-GEDENQKEESSDDEGDTDKGEDEAT 172
           EERT+KKRLKRQKKKQRRKEK+SK+NS G DENQK+ SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 173

[Close]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IY34 (PRKR-interacting protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481671 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 3.18e-91
Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTESNALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGE-DENQKEESSDDEGDTDKGEDEAT 172
           EERT+KKRLKRQKK+QRRKEK+SK+NSG  DENQK+ SS +EGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKRQRRKEKKSKLNSGGGDENQKDASSGEEGDTDNGEDEAT 173

[Close]

BLAST of MELO3C019546.jh1 vs. TAIR 10
Match: AT2G15270.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 9.4e-39
Identity = 107/177 (60.45%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MSTGKLKDGERRLVI-PMPPKPKPETQLAT-TESNALVEYTPPVK-EEDEDLEVKLRRII 60
           MS+GK K G+ RLV+         E + A    S+++VEY PPV  E++EDLEVKLRRI+
Sbjct: 1   MSSGKPKQGDTRLVVAATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEVKLRRIL 60

Query: 61  DNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERM 120
           +NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +RREE+ 
Sbjct: 61  ENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTIRREEKQ 120

Query: 121 KAAEERTAKKRLKRQKKKQRRKEKRSKMNSGEDENQKE---ESSDDEGDTDKGEDEA 172
           KAAEE+T+KKRLKRQKKKQ+++EK+ K N+ E+E ++    E S DEG+ D+ E+E+
Sbjct: 121 KAAEEKTSKKRLKRQKKKQKKQEKKQKPNTTEEEVKQPRVGEISSDEGE-DEVEEES 176

The following BLAST results are available for this feature:

BLAST of MELO3C019546.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456169.1	5.79e-103	100.00	PREDICTED: PRKR-interacting protein 1 [Cucumis melo]	[more]
XP_011651236.1	2.26e-100	97.09	PRKR-interacting protein 1 [Cucumis sativus] >KGN57498.1 hypothetical protein Cs...	[more]
XP_038886372.1	2.95e-96	93.60	PRKR-interacting protein 1 [Benincasa hispida]	[more]
TYK13889.1	4.31e-93	77.83	PRKR-interacting protein 1 [Cucumis melo var. makuwa]	[more]
XP_022941948.1	5.63e-92	91.91	PRKR-interacting protein 1 [Cucurbita moschata]	[more]

BLAST of MELO3C019546.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CWV6	4.9e-08	35.75	PRKR-interacting protein 1 OS=Mus musculus OX=10090 GN=Prkrip1 PE=1 SV=2	[more]
Q2KIT1	2.4e-07	36.99	PRKR-interacting protein 1 OS=Bos taurus OX=9913 GN=PRKRIP1 PE=2 SV=1	[more]
Q9H875	2.7e-06	34.46	PRKR-interacting protein 1 OS=Homo sapiens OX=9606 GN=PRKRIP1 PE=1 SV=1	[more]
Q5R5J3	2.7e-06	34.46	PRKR-interacting protein 1 OS=Pongo abelii OX=9601 GN=PRKRIP1 PE=2 SV=1	[more]
Q5ZKU0	1.0e-05	34.52	PRKR-interacting protein 1 homolog OS=Gallus gallus OX=9031 GN=PRKRIP1 PE=2 SV=1	[more]

BLAST of MELO3C019546.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2Q3	2.80e-103	100.00	PRKR-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103496186 PE=4 SV=1	[more]
A0A0A0L705	1.09e-100	97.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199600 PE=4 SV=1	[more]
A0A5D3CUJ1	2.09e-93	77.83	PRKR-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1FTH7	2.73e-92	91.91	PRKR-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447158 PE=4 SV...	[more]
A0A6J1IY34	3.18e-91	90.75	PRKR-interacting protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481671 PE=4 SV=1	[more]

BLAST of MELO3C019546.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15270.1	9.4e-39	60.45	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..172
IPR009548	PRKR-interacting protein 1	PFAM	PF06658	DUF1168	coord: 54..169 e-value: 2.4E-28 score: 98.6
IPR009548	PRKR-interacting protein 1	PANTHER	PTHR13507	UNCHARACTERIZED	coord: 9..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019546.jh1.t1	MELO3C019546.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding