MELO3C019538.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019538.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Locationchr06: 12194567 .. 12195004 (+)
RNA-Seq ExpressionMELO3C019538.jh1
SyntenyMELO3C019538.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATAAAAGAATCGAAGAGAAGTTGGAAGAGTTCGACCAAGAGATCGCGGAAATACAATTAGAGTTTCATAAATTACCAACGATTGAAGAGAAGTTGCTATCAATGATGAAAAGTATTGAAAGGTTGGAAATCCAGGGGAACAAACAACAACAATTGTTGTTGAAGTATGTCGAAGGAATAATGAAGAAAAGATCGACGTTACTTAGAGGAATGGAAGAGTCATTGAGCAAGGAACAATCGATTGAGAGGATTGTCAAAGGTGGAGGAGCAATGATGAAAGGAATCAAGATAGATGAAAAGACGACAACAGTTGAAGAATACAAGAATTCGAATGATCTTATTAAGATTAAGGTCGGCATTGATTCATATTTGTGTTTGTTTGGAGCAGGTCAGTATCTTCAGGTCCATAAATTAACGGATTTTGAGAAGTAG

mRNA sequence

ATGGAGCATAAAAGAATCGAAGAGAAGTTGGAAGAGTTCGACCAAGAGATCGCGGAAATACAATTAGAGTTTCATAAATTACCAACGATTGAAGAGAAGTTGCTATCAATGATGAAAAGTATTGAAAGGTTGGAAATCCAGGGGAACAAACAACAACAATTGTTGTTGAAGTATGTCGAAGGAATAATGAAGAAAAGATCGACGTTACTTAGAGGAATGGAAGAGTCATTGAGCAAGGAACAATCGATTGAGAGGATTGTCAAAGGTGGAGGAGCAATGATGAAAGGAATCAAGATAGATGAAAAGACGACAACAGTTGAAGAATACAAGAATTCGAATGATCTTATTAAGATTAAGGTCGGCATTGATTCATATTTGTGTTTGTTTGGAGCAGGTCAGTATCTTCAGGTCCATAAATTAACGGATTTTGAGAAGTAG

Coding sequence (CDS)

ATGGAGCATAAAAGAATCGAAGAGAAGTTGGAAGAGTTCGACCAAGAGATCGCGGAAATACAATTAGAGTTTCATAAATTACCAACGATTGAAGAGAAGTTGCTATCAATGATGAAAAGTATTGAAAGGTTGGAAATCCAGGGGAACAAACAACAACAATTGTTGTTGAAGTATGTCGAAGGAATAATGAAGAAAAGATCGACGTTACTTAGAGGAATGGAAGAGTCATTGAGCAAGGAACAATCGATTGAGAGGATTGTCAAAGGTGGAGGAGCAATGATGAAAGGAATCAAGATAGATGAAAAGACGACAACAGTTGAAGAATACAAGAATTCGAATGATCTTATTAAGATTAAGGTCGGCATTGATTCATATTTGTGTTTGTTTGGAGCAGGTCAGTATCTTCAGGTCCATAAATTAACGGATTTTGAGAAGTAG

Protein sequence

MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVEGIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKVGIDSYLCLFGAGQYLQVHKLTDFEK
Homology
BLAST of MELO3C019538.jh1 vs. NCBI nr
Match: KAA0037165.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >TYK13907.1 histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (642), Expect = 4.74e-83
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60
           MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE
Sbjct: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60

Query: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV 120
           GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV
Sbjct: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV 120

Query: 121 GIDSYLCLFGAGQYLQVHKLTD 142
           GIDSYLCLFGAG++  +  L D
Sbjct: 121 GIDSYLCLFGAGRFKNIGMLCD 142

BLAST of MELO3C019538.jh1 vs. NCBI nr
Match: KAA0045927.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 3.18e-33
Identity = 79/138 (57.25%), Postives = 89/138 (64.49%), Query Frame = 0

Query: 9   KLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVEGIMKKRST 68
           KLE+FDQEIA I++E HKLP  EE  LS  KSIERLEIQ  KQQQLLLKYVEG+M + ST
Sbjct: 8   KLEKFDQEIAGIRVELHKLPVTEEDFLSSKKSIERLEIQAEKQQQLLLKYVEGMMMEIST 67

Query: 69  LLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIK-VGIDSYLC 128
           L                      A MK IKID KT TV+E +NSND  KIK VG D   C
Sbjct: 68  LQ---------------------ATMKRIKIDRKTITVKEDENSNDRSKIKNVGSDPDSC 124

Query: 129 LFGAGQYLQVHKLTDFEK 145
           LFGA +YLQ+HK TD +K
Sbjct: 128 LFGADRYLQIHKSTDSKK 124

BLAST of MELO3C019538.jh1 vs. NCBI nr
Match: KAA0054161.1 (uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 3.58e-29
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQ---LLLK 60
           M  KRIEEKLE FDQ+I+EI++E HKLPTIEE L S  KSIERL IQ  KQQQ   LLLK
Sbjct: 1   MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEKQQQQQQLLLK 60

Query: 61  YVEGIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSND 114
           Y+EG++K++ST++ G+E S SK + +E +++G  A MK  K++ K + +EE +  ND
Sbjct: 61  YIEGMVKEKSTMIEGIEGSSSKGRPVESVLEGSDATMKDTKLEVKMSKIEEEEYLND 117

BLAST of MELO3C019538.jh1 vs. NCBI nr
Match: KAA0038326.1 (Exosome complex component CSL4 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.04e-20
Identity = 59/133 (44.36%), Postives = 81/133 (60.90%), Query Frame = 0

Query: 13  FDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVEGIMKKRSTLLRG 72
           FDQEI+ IQ E HKLPTIEE L+S+ KSIERL +Q  KQ QLLLKYVE + K++ST+  G
Sbjct: 2   FDQEISGIQAELHKLPTIEENLMSLAKSIERLGMQAEKQHQLLLKYVESMAKEKSTMSEG 61

Query: 73  MEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKVGIDSYLCLFGAG 132
           + ES S+  ++ + ++ G   MK I  + +TT +E  +N N                   
Sbjct: 62  VTESASQGSAMAKTIEEGSTPMKEIGSEGRTTKIEIEENLN------------------- 115

Query: 133 QYLQVHKLTDFEK 145
           +Y Q++KLTD EK
Sbjct: 122 RYFQIYKLTDSEK 115

BLAST of MELO3C019538.jh1 vs. NCBI nr
Match: KAA0049778.1 (uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK23085.1 uncharacterized protein E5676_scaffold142G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 1.26e-20
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQ--QQLLLKY 60
           M  KRIEEKL+  DQ+ + I++E HKL TIEE L SM KSIERL IQ  KQ  QQLLLK 
Sbjct: 1   MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKC 60

Query: 61  VEGIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVE 107
           +EGIMK++ST++ G E S SK   I  ++ GG   ++ IK   KT  ++
Sbjct: 61  IEGIMKEKSTMIEGPEGSSSKGSRIASMMDGGNPSIQEIKTATKTCQMQ 109

BLAST of MELO3C019538.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T6R2 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001010 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 2.29e-83
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60
           MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE
Sbjct: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60

Query: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV 120
           GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV
Sbjct: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKV 120

Query: 121 GIDSYLCLFGAGQYLQVHKLTD 142
           GIDSYLCLFGAG++  +  L D
Sbjct: 121 GIDSYLCLFGAGRFKNIGMLCD 142

BLAST of MELO3C019538.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TVL4 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004660 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.54e-33
Identity = 79/138 (57.25%), Postives = 89/138 (64.49%), Query Frame = 0

Query: 9   KLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVEGIMKKRST 68
           KLE+FDQEIA I++E HKLP  EE  LS  KSIERLEIQ  KQQQLLLKYVEG+M + ST
Sbjct: 8   KLEKFDQEIAGIRVELHKLPVTEEDFLSSKKSIERLEIQAEKQQQLLLKYVEGMMMEIST 67

Query: 69  LLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIK-VGIDSYLC 128
           L                      A MK IKID KT TV+E +NSND  KIK VG D   C
Sbjct: 68  LQ---------------------ATMKRIKIDRKTITVKEDENSNDRSKIKNVGSDPDSC 124

Query: 129 LFGAGQYLQVHKLTDFEK 145
           LFGA +YLQ+HK TD +K
Sbjct: 128 LFGADRYLQIHKSTDSKK 124

BLAST of MELO3C019538.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00900 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 1.73e-29
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQ---LLLK 60
           M  KRIEEKLE FDQ+I+EI++E HKLPTIEE L S  KSIERL IQ  KQQQ   LLLK
Sbjct: 1   MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEKQQQQQQLLLK 60

Query: 61  YVEGIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSND 114
           Y+EG++K++ST++ G+E S SK + +E +++G  A MK  K++ K + +EE +  ND
Sbjct: 61  YIEGMVKEKSTMIEGIEGSSSKGRPVESVLEGSDATMKDTKLEVKMSKIEEEEYLND 117

BLAST of MELO3C019538.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T7Y2 (Exosome complex component CSL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002000 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.05e-21
Identity = 59/133 (44.36%), Postives = 81/133 (60.90%), Query Frame = 0

Query: 13  FDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVEGIMKKRSTLLRG 72
           FDQEI+ IQ E HKLPTIEE L+S+ KSIERL +Q  KQ QLLLKYVE + K++ST+  G
Sbjct: 2   FDQEISGIQAELHKLPTIEENLMSLAKSIERLGMQAEKQHQLLLKYVESMAKEKSTMSEG 61

Query: 73  MEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKNSNDLIKIKVGIDSYLCLFGAG 132
           + ES S+  ++ + ++ G   MK I  + +TT +E  +N N                   
Sbjct: 62  VTESASQGSAMAKTIEEGSTPMKEIGSEGRTTKIEIEENLN------------------- 115

Query: 133 QYLQVHKLTDFEK 145
           +Y Q++KLTD EK
Sbjct: 122 RYFQIYKLTDSEK 115

BLAST of MELO3C019538.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DHM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00650 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.10e-21
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQ--QQLLLKY 60
           M  KRIEEKL+  DQ+ + I++E HKL TIEE L SM KSIERL IQ  KQ  QQLLLK 
Sbjct: 1   MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKC 60

Query: 61  VEGIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVE 107
           +EGIMK++ST++ G E S SK   I  ++ GG   ++ IK   KT  ++
Sbjct: 61  IEGIMKEKSTMIEGPEGSSSKGSRIASMMDGGNPSIQEIKTATKTCQMQ 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037165.14.74e-8394.37histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >... [more]
KAA0045927.13.18e-3357.25transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
KAA0054161.13.58e-2954.70uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa][more]
KAA0038326.11.04e-2044.36Exosome complex component CSL4 [Cucumis melo var. makuwa][more]
KAA0049778.11.26e-2052.29uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK2... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T6R22.29e-8394.37Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ... [more]
A0A5A7TVL41.54e-3357.25Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7UKU81.73e-2954.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T7Y25.05e-2144.36Exosome complex component CSL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3DHM56.10e-2152.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019538.jh1.t1MELO3C019538.jh1.t1mRNA