MELO3C019478 (gene) Melon (DHL92) v4

Overview
NameMELO3C019478
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmaternal effect embryo arrest 9
Locationchr06: 10519151 .. 10519375 (-)
RNA-Seq ExpressionMELO3C019478
SyntenyMELO3C019478
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGTTCAGACGGTTCGAAGAGGAGTTTGATCAGATGGCTAAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGCGTCGGTTGCTTCTAAGAGGTACATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGATGAGTTCAGACGGTTCGAAGAGGAGTTTGATCAGATGGCTAAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGCGTCGGTTGCTTCTAAGAGGTACATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGATGAGTTCAGACGGTTCGAAGAGGAGTTTGATCAGATGGCTAAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGCGTCGGTTGCTTCTAAGAGGTACATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Homology
[Close]
BLAST of MELO3C019478 vs. NCBI nr
Match: XP_016901903.1 (PREDICTED: uncharacterized protein LOC103496225 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
          MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 8  MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 67

Query: 61 SAWKAISSNKVHPS 75
          SAWKAISSNKVHPS
Sbjct: 68 SAWKAISSNKVHPS 81

[Close]
BLAST of MELO3C019478 vs. NCBI nr
Match: XP_004149957.1 (uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical protein Csa_011667 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 9.7e-27
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. NCBI nr
Match: KAA0039061.1 (uncharacterized protein E6C27_scaffold84G001570 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 9.7e-27
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 379 MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 438

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 439 SAWKAISSNKVHPS 452

[Close]
BLAST of MELO3C019478 vs. NCBI nr
Match: TYJ99746.1 (uncharacterized protein E5676_scaffold252G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 2.8e-26
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKA SVASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. NCBI nr
Match: XP_038885707.1 (uncharacterized protein LOC120075975 [Benincasa hispida])

HSP 1 Score: 127.5 bits (319), Expect = 4.8e-26
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQ+LLDKSEKARKMGSLMEKAA+VASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQELLDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match: A0A1S4E104 (uncharacterized protein LOC103496225 OS=Cucumis melo OX=3656 GN=LOC103496225 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-28
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
          MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 8  MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 67

Query: 61 SAWKAISSNKVHPS 75
          SAWKAISSNKVHPS
Sbjct: 68 SAWKAISSNKVHPS 81

[Close]
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match: A0A5A7TBR7 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001570 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.7e-27
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 379 MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 438

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 439 SAWKAISSNKVHPS 452

[Close]
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match: A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.7e-27
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match: A0A5D3BKS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00220 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQQLLDKSEKARKMGSLMEKA SVASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match: A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-26
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           MDEFRRFEEEFD+MA+AELQ+L+DKSEKARKMGSLMEKAA+VASKRYMEAAMNSATASMR
Sbjct: 74  MDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWKAISSNKVHPS
Sbjct: 134 SAWKAISSNKVHPS 147

[Close]
BLAST of MELO3C019478 vs. TAIR 10
Match: AT1G60870.1 (maternal effect embryo arrest 9 )

HSP 1 Score: 80.9 bits (198), Expect = 4.8e-16
Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1   MDEFRRFEEEFDQMAKAELQQLLDKSEKARKMGSLMEKAASVASKRYMEAAMNSATASMR 60
           M+E+RR  EE ++M  AEL++L +K+E AR+ G+LMEKAA+VA+KR++ AAM SA ASMR
Sbjct: 74  MEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRHIAAAMGSAAASMR 133

Query: 61  SAWKAISSNKVHPS 75
           SAWK  + NKVHPS
Sbjct: 134 SAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:
BLAST of MELO3C019478 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901903.11.1e-27100.00PREDICTED: uncharacterized protein LOC103496225 [Cucumis melo][more]
XP_004149957.19.7e-2797.30uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical ... [more]
KAA0039061.19.7e-2797.30uncharacterized protein E6C27_scaffold84G001570 [Cucumis melo var. makuwa][more]
TYJ99746.12.8e-2695.95uncharacterized protein E5676_scaffold252G00220 [Cucumis melo var. makuwa][more]
XP_038885707.14.8e-2694.59uncharacterized protein LOC120075975 [Benincasa hispida][more]
BLAST of MELO3C019478 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C019478 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E1045.6e-28100.00uncharacterized protein LOC103496225 OS=Cucumis melo OX=3656 GN=LOC103496225 PE=... [more]
A0A5A7TBR74.7e-2797.30Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0LAB64.7e-2797.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1[more]
A0A5D3BKS01.4e-2695.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1E4Z95.2e-2693.24uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306... [more]
BLAST of MELO3C019478 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G60870.14.8e-1660.81maternal effect embryo arrest 9 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37707MATERNAL EFFECT EMBRYO ARREST 9coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019478.1MELO3C019478.1mRNA