MELO3C019477.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019477.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Fe2OG dioxygenase domain-containing protein
Location	chr06: 10993461 .. 10993697 (+)
RNA-Seq Expression	MELO3C019477.jh1
Synteny	MELO3C019477.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

mRNA sequence

ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

Coding sequence (CDS)

ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

Protein sequence

MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTRLEVLSPREFSGPVSTPLL

Homology

[Close]

BLAST of MELO3C019477.jh1 vs. NCBI nr
Match: XP_022149186.1 (RNA demethylase ALKBH5-like [Momordica charantia])

HSP 1 Score: 148 bits (374), Expect = 4.94e-40
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR VKW IL  TC+PDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+R
Sbjct: 311 MIKRMVKWHILPRTCVPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSR 370

Query: 61  LEVLSPREFSGPVSTPL 77
           LE+LSP EFSGPVS PL
Sbjct: 371 LEILSPGEFSGPVSIPL 387

[Close]

BLAST of MELO3C019477.jh1 vs. NCBI nr
Match: KAF2293798.1 (hypothetical protein GH714_004819 [Hevea brasiliensis])

HSP 1 Score: 142 bits (358), Expect = 1.04e-38
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L  TCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 184 MIKRMVRWHVLPPTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 243

Query: 61  LEVLSPREFSGPVSTPL 77
           L++LSP EFSGPVS PL
Sbjct: 244 LKILSPGEFSGPVSMPL 260

[Close]

BLAST of MELO3C019477.jh1 vs. NCBI nr
Match: XP_021672522.1 (uncharacterized protein LOC110659008 [Hevea brasiliensis])

HSP 1 Score: 142 bits (358), Expect = 4.71e-38
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L  TCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 281 MIKRMVRWHVLPPTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 340

Query: 61  LEVLSPREFSGPVSTPL 77
           L++LSP EFSGPVS PL
Sbjct: 341 LKILSPGEFSGPVSMPL 357

[Close]

BLAST of MELO3C019477.jh1 vs. NCBI nr
Match: KDO40724.1 (hypothetical protein CISIN_1g025324mg [Citrus sinensis])

HSP 1 Score: 137 bits (344), Expect = 5.02e-38
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W IL  TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 36  MIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSS 95

Query: 61  LEVLSPREFSGPVSTPL 77
           L+++ P EFSGP+S PL
Sbjct: 96  LKIVGPGEFSGPISIPL 112

[Close]

BLAST of MELO3C019477.jh1 vs. NCBI nr
Match: XP_021617215.1 (uncharacterized protein LOC110618397 isoform X2 [Manihot esculenta] >KAG8650240.1 hypothetical protein MANES_07G016100v8 [Manihot esculenta])

HSP 1 Score: 141 bits (355), Expect = 8.51e-38
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L +TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 255 MIKRMVRWHVLPATCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 314

Query: 61  LEVLSPREFSGPVSTPL 77
           L++LSP EFSGPVS PL
Sbjct: 315 LKILSPGEFSGPVSIPL 331

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy Swiss-Prot
Match: Q9SL49 (RNA demethylase ALKBH9B OS=Arabidopsis thaliana OX=3702 GN=ALKBH9B PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.8e-27
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I++ +KW +L  TC+PDSCIVNIYDEGDCIPPHID+HDFLRPFCT+SF +E +I+FG+ 
Sbjct: 302 IIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHDFLRPFCTISFLSECDILFGSN 361

Query: 61  LEVLSPREFSGPVSTPL 78
           L+V  P +FSG  S PL
Sbjct: 362 LKVEGPGDFSGSYSIPL 378

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL
Match: A0A6J1D7M0 (RNA demethylase ALKBH5-like OS=Momordica charantia OX=3673 GN=LOC111017672 PE=4 SV=1)

HSP 1 Score: 148 bits (374), Expect = 2.39e-40
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR VKW IL  TC+PDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+R
Sbjct: 311 MIKRMVKWHILPRTCVPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSR 370

Query: 61  LEVLSPREFSGPVSTPL 77
           LE+LSP EFSGPVS PL
Sbjct: 371 LEILSPGEFSGPVSIPL 387

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL
Match: A0A6A6L0P8 (Fe2OG dioxygenase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_004819 PE=4 SV=1)

HSP 1 Score: 142 bits (358), Expect = 5.01e-39
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L  TCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 184 MIKRMVRWHVLPPTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 243

Query: 61  LEVLSPREFSGPVSTPL 77
           L++LSP EFSGPVS PL
Sbjct: 244 LKILSPGEFSGPVSMPL 260

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL
Match: A0A067DCM5 (Fe2OG dioxygenase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025324mg PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 2.43e-38
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W IL  TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 36  MIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSS 95

Query: 61  LEVLSPREFSGPVSTPL 77
           L+++ P EFSGP+S PL
Sbjct: 96  LKIVGPGEFSGPISIPL 112

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL
Match: A0A7J6V147 (Rna demethylase alkbh9b OS=Thalictrum thalictroides OX=46969 GN=FRX31_031707 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 4.62e-38
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W IL S+CIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+ 
Sbjct: 53  MIKRMVRWRILPSSCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSN 112

Query: 61  LEVLSPREFSGPVSTPL 77
           L++++P EFSG  S PL
Sbjct: 113 LKIVAPGEFSGSASIPL 129

[Close]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL
Match: A0A2C9VHM6 (Fe2OG dioxygenase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_07G016100 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 5.81e-38
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L +TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 280 MIKRMVRWHVLPATCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 339

Query: 61  LEVLSPREFSGPVSTPL 77
           L++LSP EFSGPVS PL
Sbjct: 340 LKILSPGEFSGPVSIPL 356

[Close]

BLAST of MELO3C019477.jh1 vs. TAIR 10
Match: AT4G36090.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein )

HSP 1 Score: 123.2 bits (308), Expect = 8.9e-29
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +IKR V W +L  TC+PDSCIVNIY+E DCIPPHID+HDFLRPFCTVSF +E NI+FG+ 
Sbjct: 306 IIKRLVGWHVLPPTCVPDSCIVNIYEEDDCIPPHIDNHDFLRPFCTVSFLSECNILFGSN 365

Query: 61  LEVLSPREFSGPVSTPL 78
           L+VL P EFSG  S PL
Sbjct: 366 LKVLGPGEFSGSYSIPL 382

[Close]

BLAST of MELO3C019477.jh1 vs. TAIR 10
Match: AT4G36090.2 (oxidoreductase, 2OG-Fe(II) oxygenase family protein )

HSP 1 Score: 123.2 bits (308), Expect = 8.9e-29
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +IKR V W +L  TC+PDSCIVNIY+E DCIPPHID+HDFLRPFCTVSF +E NI+FG+ 
Sbjct: 238 IIKRLVGWHVLPPTCVPDSCIVNIYEEDDCIPPHIDNHDFLRPFCTVSFLSECNILFGSN 297

Query: 61  LEVLSPREFSGPVSTPL 78
           L+VL P EFSG  S PL
Sbjct: 298 LKVLGPGEFSGSYSIPL 314

[Close]

BLAST of MELO3C019477.jh1 vs. TAIR 10
Match: AT4G36090.3 (oxidoreductase, 2OG-Fe(II) oxygenase family protein )

HSP 1 Score: 123.2 bits (308), Expect = 8.9e-29
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +IKR V W +L  TC+PDSCIVNIY+E DCIPPHID+HDFLRPFCTVSF +E NI+FG+ 
Sbjct: 306 IIKRLVGWHVLPPTCVPDSCIVNIYEEDDCIPPHIDNHDFLRPFCTVSFLSECNILFGSN 365

Query: 61  LEVLSPREFSGPVSTPL 78
           L+VL P EFSG  S PL
Sbjct: 366 LKVLGPGEFSGSYSIPL 382

[Close]

BLAST of MELO3C019477.jh1 vs. TAIR 10
Match: AT2G17970.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.4e-28
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I++ +KW +L  TC+PDSCIVNIYDEGDCIPPHID+HDFLRPFCT+SF +E +I+FG+ 
Sbjct: 302 IIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHDFLRPFCTISFLSECDILFGSN 361

Query: 61  LEVLSPREFSGPVSTPL 78
           L+V  P +FSG  S PL
Sbjct: 362 LKVEGPGDFSGSYSIPL 378

[Close]

BLAST of MELO3C019477.jh1 vs. TAIR 10
Match: AT2G17970.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.4e-28
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I++ +KW +L  TC+PDSCIVNIYDEGDCIPPHID+HDFLRPFCT+SF +E +I+FG+ 
Sbjct: 228 IIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHDFLRPFCTISFLSECDILFGSN 287

Query: 61  LEVLSPREFSGPVSTPL 78
           L+V  P +FSG  S PL
Sbjct: 288 LKVEGPGDFSGSYSIPL 304

The following BLAST results are available for this feature:

BLAST of MELO3C019477.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149186.1	4.94e-40	85.71	RNA demethylase ALKBH5-like [Momordica charantia]	[more]
KAF2293798.1	1.04e-38	80.52	hypothetical protein GH714_004819 [Hevea brasiliensis]	[more]
XP_021672522.1	4.71e-38	80.52	uncharacterized protein LOC110659008 [Hevea brasiliensis]	[more]
KDO40724.1	5.02e-38	76.62	hypothetical protein CISIN_1g025324mg [Citrus sinensis]	[more]
XP_021617215.1	8.51e-38	79.22	uncharacterized protein LOC110618397 isoform X2 [Manihot esculenta] >KAG8650240....	[more]

BLAST of MELO3C019477.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL49	4.8e-27	64.94	RNA demethylase ALKBH9B OS=Arabidopsis thaliana OX=3702 GN=ALKBH9B PE=1 SV=1	[more]

BLAST of MELO3C019477.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7M0	2.39e-40	85.71	RNA demethylase ALKBH5-like OS=Momordica charantia OX=3673 GN=LOC111017672 PE=4 ...	[more]
A0A6A6L0P8	5.01e-39	80.52	Fe2OG dioxygenase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH7...	[more]
A0A067DCM5	2.43e-38	76.62	Fe2OG dioxygenase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_...	[more]
A0A7J6V147	4.62e-38	76.62	Rna demethylase alkbh9b OS=Thalictrum thalictroides OX=46969 GN=FRX31_031707 PE=...	[more]
A0A2C9VHM6	5.81e-38	79.22	Fe2OG dioxygenase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANE...	[more]

BLAST of MELO3C019477.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36090.1	8.9e-29	70.13	oxidoreductase, 2OG-Fe(II) oxygenase family protein	[more]
AT4G36090.2	8.9e-29	70.13	oxidoreductase, 2OG-Fe(II) oxygenase family protein	[more]
AT4G36090.3	8.9e-29	70.13	oxidoreductase, 2OG-Fe(II) oxygenase family protein	[more]
AT2G17970.1	3.4e-28	64.94	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G17970.2	3.4e-28	64.94	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	2.60.120.590		coord: 1..78 e-value: 4.3E-21 score: 77.5
IPR044842	RNA demethylase ALKBH9B/ALKBH10B-like	PANTHER	PTHR31447	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 1..77
None	No IPR available	PANTHER	PTHR31447:SF1	2OG-FE(II) OXYGENASE	coord: 1..77
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 8..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019477.jh1.t1	MELO3C019477.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006402	mRNA catabolic process
molecular_function	GO:0032451	demethylase activity
molecular_function	GO:0003729	mRNA binding