Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTGCTCCTGAGAGTCATATGTCCAATATGGATTCAGATGACCTAGATGATGTTCCACTAGCCCGATTGTTAAAGAAGAATTTTGTTCTTGATGTTGTAGCTGAAAAATATATTGATCCTCCTATATCAGTTCATTCTTAGGAAAGCTCGTCTACTGAAGGTGTGTTTGTTCCTACCCCTAGCCTTCAACATACTTCAAATGTTGAACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG
mRNA sequence
ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG
Coding sequence (CDS)
ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG
Protein sequence
MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDRLYEPVQDDVDSRNPATNTEHAPGPSLYSSPVRSSIPKNTTTSGPHNDSAPAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPTKKKFQ
Homology
BLAST of MELO3C019388 vs. NCBI nr
Match:
TYK11261.1 (envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 301.2 bits (770), Expect = 5.7e-78
Identity = 169/243 (69.55%), Postives = 169/243 (69.55%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGL FKSTP QRPYRLLLEKSQAHVFDR
Sbjct: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 120
LYEPVQDDVDSRNPATN EHA
Sbjct: 61 LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120
Query: 121 -------------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
PGPSLYSSPVRSSIPKNTTTSGPHNDSAP
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180
BLAST of MELO3C019388 vs. NCBI nr
Match:
KAA0050548.1 (envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 263.8 bits (673), Expect = 1.0e-66
Identity = 150/224 (66.96%), Postives = 150/224 (66.96%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGL FKSTP QRPYRLLLEKSQAHVFDR
Sbjct: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 120
LYEPVQDDVDSRNPATN EHA
Sbjct: 61 LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120
Query: 121 -------------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAP 155
PGPSLYSSPVRSSIPKNTTTSGPHNDSAP
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180
BLAST of MELO3C019388 vs. NCBI nr
Match:
KAA0040873.1 (hypothetical protein E6C27_scaffold345G00260 [Cucumis melo var. makuwa])
HSP 1 Score: 226.1 bits (575), Expect = 2.3e-55
Identity = 125/196 (63.78%), Postives = 137/196 (69.90%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNT+K TYAAKSS+ +LE QI K SMHGV IGG FKSTP QRPYRL EKSQAH FDR
Sbjct: 1 MVNTQKCTYAAKSSEGILEAQISKKSMHGVRIGGCHFKSTPPQRPYRLPSEKSQAHAFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHAP------------------------GPSLYSSPVRSSIP 120
L+EPVQ+DVDS+NP T +HAP GPS S P+RSSIP
Sbjct: 61 LHEPVQEDVDSQNPMTYAKHAPSARETHMSDMDSDDLEDHTSNVELGPSHDSFPIRSSIP 120
Query: 121 KNTTTSGPHNDSAPAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQP 173
NTTTSGP ND APA ESIATEGRT VHN ED+VEP N DH GEI +DDNNN AQ
Sbjct: 121 DNTTTSGPRNDPAPAPTIESIATEGRTAVHNDEDKVEPVNTSDHIGEIHVDDNNNAVAQL 180
BLAST of MELO3C019388 vs. NCBI nr
Match:
ADN33761.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 159.5 bits (402), Expect = 2.7e-35
Identity = 109/244 (44.67%), Postives = 124/244 (50.82%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
M+NTRKGTY AKSS+D LE QIL TSMHG A+V R
Sbjct: 1 MMNTRKGTYVAKSSEDGLEAQILTTSMHG-------------------------ANVSTR 60
Query: 61 LYEPVQDDVDSRNPATNTEHAP-------------------------------------- 120
L++ V +DV+S+NP TN EH P
Sbjct: 61 LHKLVPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSI 120
Query: 121 --------------------------------GPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
GPSLYSSPVRSS+P +TTTSG +N+SAP
Sbjct: 121 DPSVSSHSQESSSTEGVFVPTPGVQHTSNFKLGPSLYSSPVRSSVP-DTTTSGLNNNSAP 180
BLAST of MELO3C019388 vs. NCBI nr
Match:
KAA0053467.1 (uncharacterized protein E6C27_scaffold190G00150 [Cucumis melo var. makuwa] >TYK19883.1 uncharacterized protein E5676_scaffold1267G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33
Identity = 88/151 (58.28%), Postives = 94/151 (62.25%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKD+L+ QI KTSMHGV + G RFKS P +RPY L LEKSQAHV DR
Sbjct: 1 MVNTRKGTYAAKSSKDILKAQISKTSMHGVRMRGRRFKSIPPRRPYSLPLEKSQAHVSDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 112
+YE VQDDVDS+NP TN EHA
Sbjct: 61 IYESVQDDVDSQNPMTNAEHAPSAPMTHMSDIDFDDLDDESSSTEGVFVPTSGLQHTSNV 120
BLAST of MELO3C019388 vs. ExPASy TrEMBL
Match:
A0A5D3CHI7 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001170 PE=4 SV=1)
HSP 1 Score: 301.2 bits (770), Expect = 2.8e-78
Identity = 169/243 (69.55%), Postives = 169/243 (69.55%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGL FKSTP QRPYRLLLEKSQAHVFDR
Sbjct: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 120
LYEPVQDDVDSRNPATN EHA
Sbjct: 61 LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120
Query: 121 -------------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
PGPSLYSSPVRSSIPKNTTTSGPHNDSAP
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180
BLAST of MELO3C019388 vs. ExPASy TrEMBL
Match:
A0A5A7U5K4 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001990 PE=4 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67
Identity = 150/224 (66.96%), Postives = 150/224 (66.96%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGL FKSTP QRPYRLLLEKSQAHVFDR
Sbjct: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 120
LYEPVQDDVDSRNPATN EHA
Sbjct: 61 LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120
Query: 121 -------------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAP 155
PGPSLYSSPVRSSIPKNTTTSGPHNDSAP
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180
BLAST of MELO3C019388 vs. ExPASy TrEMBL
Match:
A0A5A7TCN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00260 PE=4 SV=1)
HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 125/196 (63.78%), Postives = 137/196 (69.90%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNT+K TYAAKSS+ +LE QI K SMHGV IGG FKSTP QRPYRL EKSQAH FDR
Sbjct: 1 MVNTQKCTYAAKSSEGILEAQISKKSMHGVRIGGCHFKSTPPQRPYRLPSEKSQAHAFDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHAP------------------------GPSLYSSPVRSSIP 120
L+EPVQ+DVDS+NP T +HAP GPS S P+RSSIP
Sbjct: 61 LHEPVQEDVDSQNPMTYAKHAPSARETHMSDMDSDDLEDHTSNVELGPSHDSFPIRSSIP 120
Query: 121 KNTTTSGPHNDSAPAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQP 173
NTTTSGP ND APA ESIATEGRT VHN ED+VEP N DH GEI +DDNNN AQ
Sbjct: 121 DNTTTSGPRNDPAPAPTIESIATEGRTAVHNDEDKVEPVNTSDHIGEIHVDDNNNAVAQL 180
BLAST of MELO3C019388 vs. ExPASy TrEMBL
Match:
E5GBC0 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 109/244 (44.67%), Postives = 124/244 (50.82%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
M+NTRKGTY AKSS+D LE QIL TSMHG A+V R
Sbjct: 1 MMNTRKGTYVAKSSEDGLEAQILTTSMHG-------------------------ANVSTR 60
Query: 61 LYEPVQDDVDSRNPATNTEHAP-------------------------------------- 120
L++ V +DV+S+NP TN EH P
Sbjct: 61 LHKLVPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSI 120
Query: 121 --------------------------------GPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
GPSLYSSPVRSS+P +TTTSG +N+SAP
Sbjct: 121 DPSVSSHSQESSSTEGVFVPTPGVQHTSNFKLGPSLYSSPVRSSVP-DTTTSGLNNNSAP 180
BLAST of MELO3C019388 vs. ExPASy TrEMBL
Match:
A0A5D3D8M5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1267G00030 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 5.4e-34
Identity = 88/151 (58.28%), Postives = 94/151 (62.25%), Query Frame = 0
Query: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
MVNTRKGTYAAKSSKD+L+ QI KTSMHGV + G RFKS P +RPY L LEKSQAHV DR
Sbjct: 1 MVNTRKGTYAAKSSKDILKAQISKTSMHGVRMRGRRFKSIPPRRPYSLPLEKSQAHVSDR 60
Query: 61 LYEPVQDDVDSRNPATNTEHA--------------------------------------- 112
+YE VQDDVDS+NP TN EHA
Sbjct: 61 IYESVQDDVDSQNPMTNAEHAPSAPMTHMSDIDFDDLDDESSSTEGVFVPTSGLQHTSNV 120
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK11261.1 | 5.7e-78 | 69.55 | envelope-like protein [Cucumis melo var. makuwa] | [more] |
| KAA0050548.1 | 1.0e-66 | 66.96 | envelope-like protein [Cucumis melo var. makuwa] | [more] |
| KAA0040873.1 | 2.3e-55 | 63.78 | hypothetical protein E6C27_scaffold345G00260 [Cucumis melo var. makuwa] | [more] |
| ADN33761.1 | 2.7e-35 | 44.67 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KAA0053467.1 | 1.1e-33 | 58.28 | uncharacterized protein E6C27_scaffold190G00150 [Cucumis melo var. makuwa] >TYK1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CHI7 | 2.8e-78 | 69.55 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22... | [more] |
| A0A5A7U5K4 | 4.9e-67 | 66.96 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17... | [more] |
| A0A5A7TCN1 | 1.1e-55 | 63.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| E5GBC0 | 1.3e-35 | 44.67 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A5D3D8M5 | 5.4e-34 | 58.28 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
