MELO3C019371.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019371.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
Location	chr06: 9396214 .. 9404540 (+)
RNA-Seq Expression	MELO3C019371.jh1
Synteny	MELO3C019371.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGTCTAGATCTAAGAGGAATTACTACTATGACCACCAAGACTTTGATTCCGAGTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCCAATAATAATTATCGTCATCGTGGAAATGCTGTTCGACCCTCTAAACCTCAAGACCAATCTCTTATGGTCACCACTACTTACAGGATACTTTGTCATGATGCTAAAGCTGGGGGAGTTATTGGCAAATCTGGTAGTATTATTAAGTCTATAAGGCAGCATACCGGCGCGTGGATCAACGTGCATGAGCTTGTTCCTGGTGATGAGGAGAGGATAATTGAGATTTCGGACACACGGCGGCGGGACCCAGAAGGTCGGATGCCGTCGTTCTCTCCGGCTCAAGAAGCGCTTTTCCTGATTCATGAAAGGATTCTTGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGGTATGGTCCTGAGGATGAGGAGGATGATTATGGTGGTGTTAGAGGAGGAGGTGGGAGCGGTTGCGGTGGTCGTGTGGCGACGAGGCTTGTTGTATCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGGTTTAGTTTCTGAACACTTCAGTATCTTGAAAAAGTACCTGATTTCTTGTTGCTAAGATGATTTAAAACTTATTGAGCTTGGAATTCCTTTTGATTCAAGCTGACTCCTCTACCTCTTCCTCAGTCCGGGTGATTCTACTCATTCCGGGTCAGGTTCAAAGGACGCTAATTTACTTTTTGGATGCTTAACCGAAGTTGCAAATTGATTGCTTAGAAGTTAAAACATGTTGGACCGTTTAATATGACAATACTCAAAATGGTACTATCGGCAGTTTAATGATGAAATGACGGGTTCTTTATTTTTGCTACTGTCCTGTAATCGCTTCACTAGCTATTTGAGAAACTCTAATAGAGTTCGAGCTGAAATCATGTGTTCAGAACTCATCAAATTTGTTTCGTACTGCACATCTTACTTGATGGGTGTGTTTAAAAAAGCTATTCAAATTTCCAGCAACTTTTTCTTTCCGGACGTCTCATCTATCTTGCATATTTAATTTGTTTGGTCTTTACATCTGCTGATTCCTATTGTTGAATGCGCATTGGTAATGCTATGCTATATACAATGTGCAGGAAGTCTGTTCCTTTCATTTCTAGTTTCTGTTTATTTGTCAGGACGGCGGTCTACAGTTTTAACTTGCCTTTAATATCATTTGGATTTGTTAAATATTCAGAAAAGATATAAGAGATTGTAGTCTTTCATTTTGTTGTATCTTTGCTTATATGAGCATGCGGTCTTTTTAGCTGATTGCTTAAGTTCTAGTATTTCACAGATTGAAGGTTTAAAAGCTGTATTGAAATAACTTATATAAGGCTTGTGTTATGATCTATTAGATGTGCATCGGAATTCCAATTTTTGGTACCAAGTTTGACCCCACTTCCATCTATGATAAGCCAACTAACCATAACTTAAACACGACCACTGTCTTGATGCAGAATGAATTAGGGAAAAAGATATGGTGACATGAAATTTTAAGTTTCTTTTTGTCTAAGTTTTATGACTTCATTGTTCCATTTGTTGAATTACGAATAACATACATGTATTAATTACTTTCCCTATTGGGTTTATAACCCTCTGTAGATTGTTGGAGATACAAATGCTGTTAAAAAAGCTATAGCTATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGATCGTAGTCATTTCCATGGGCGTCTACATTCACCAGAGCGCATTTTCCCTCCCGATGATGATTATGTTCCACATAACGCACGGCGATTACCAATGGATGGACGGCCATTTAGACCACGCATGTCTGCTTCTAATTCAAGAGGCAATGACTATTCCAACCGTCAGTCTAATTTTATGGTGGAGCCTGGGGCTGCTCCTGTAAACGACAATATGATGCCCTTTTATGGCGAGGACCTTGTATTTAGAATATTATGCCCAATTGAGAAGATAGATAGTGTTATTGGAGAGTCTAATGGAATCATTGAATTACTTCGTAACGATGTTGGTGTGGATATCAAGGTTTCTGATCCTGTGACTGGTTCGAATGAACAGATTCTTATCATTTCCTCGGATGAGGTACTTCAACTTTCTTTTTCCTTGTTAGTATAGTTCATGATTTACTGTTCCCAAGGGTCAAATGGAATCATAGAATCACTTGAGTGTGGCTCCCCTAGCAGAAGATATATATATTTGGTGTTATATAAACAACCATTTAACTGACTTTAAAAGTTATGTTTTTCCTTGTTAGTATAGTCATTTCCTTGTTACTATACTATTCACCTTTTCCTTTTTTAACTTTCTGTTTGCAAAATTTGAGTTCTTAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGATAAGGAGAACATTGTAACTACTAGGTTACTTGTACCATCAAGTGATATTGGATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACCGGTGCGAATGTACATATTGTGCCAAGAGAAGATCTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGGTTTGTCGTTGAACTTTAAATCGATAGGAGTTCTTAGAGTTTATTAAGGGTGCTTCATCTATGCGTTTTCTTGGTGTAAAAGTAAAACTAAGCACCCATTTACTCATTACAATTTATCCTTTTTATTTAGTGATTGGCAATCTCTATAGCAATTTCTTTTGTTTGGGGTTTCCCCCCTTTCCATATCTATAAATTGTTTCCTTCACAAAAAAGAAGAGAAAAAAAAGATGCTTAATGTCGCTTATTTTGTATTCTTCTTATATCAGTTACGGAGAATGGTAAAATTTAGCTGTCTTTGAACTATTTTATATCTGGCTGGTTAGAAGGGAGGCCTTTGCGTTCTGATTTCCTAATTTTCCCTAACTGCAATTTTTGTAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTCGAGTTAACATCAAGATTACGGAATTGCCTTTATAAGGAGCCGTTCCAAAAAGATGCAAGCCCTCAAGTATCAGTACAAAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAACGCTGCAGCTCGTGAAGTTCATAGTGGAAATGATTCTGCAAGCACAGCTTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGTCATTTGTTTTCTTATTTTTTCTTCTCTCTTGACAAGGCGATTCTTTCTTTTCAAAACAGTCTCTTCTCAGCCTTTGTGAGTGGAGGCACTTTCTTTCTTTGGATACAAAACTATTTCAGAGTAAGGTTCTTCTGGAAAATGCTTCCGCATAAAATTGCTCTTTTACAGTCGAGTAGTAAAAAAACTTAACGGAGATCCGAAGCGATCATGTTAAGCCCCTCAAGGCATAGGTCACTAGCAATTTTATAAAATACAATCTGCCAATTGTTGTTTTTAGTAGTCATATGGTAGAACGATCTTACTTGAACAGGATTTGTTCTATGTGTCCTTGAGTTCTAAGTAGTCATATCGTGTTCAAGTTCTAGTCTGTTGAGAATGAAAGAGTCGAGTTATTTTCTTTGCTCATGTCTACCGAAAAAAGAAGTTCTGGTCAAACTAGGTGAACATGGTTTCTACTATGGATCTTATATGTTCCTTTTGCATTATAGCATTCCTGAGCACTCCGTAAATTATCTAGCATTTTAGTGCACAGCTCTCCTGAGACTTTGGTTATGGACCAAAATGATTTAAATTATCATTTGCAGGAAACTGGAGGATCGAGCAATGAAACTGGTACGCAGAATGAAAATGATCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGTAGAACTTCATTTTTCTGTTGTGCCGATTCCTCCCCTCCCCCATTTCTTTTTTATCAATGGTACGGTTTGTTAGCTACAAATCATTCCATAGTCTAATTATTCCTCTCTTTTACGTGCTTCTCTTGTCCTTAGTGTGTTCTGCTTCTTTTATAAGTTAGATCAATAACTGTTCATTCACCTCTTAGGATACCTGTGCCACTTGTCACCCGGAGTACGCTCGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGCGAGGTAGTATTGGTGAAAATTTGTCAAACTCTTCATGCAATATATTAGAAAACTGCCTTATTGGGTGATGATTATGGGTTTAACAGTTATCCGGAGCCAATGTTATGTTGGTAGAAGATAGACCAGATGTAACCCAGAAAATAATTCAAATATCAGGCACACCGGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTGTAAGTCTCTCACTAAGTCACTTTGTGTTACGAGTTTTTAATCGTATCTTAATCTCTGAGAAATTTTCGTAAACATCCCCAAAATATTTTCATCTTTCCAAACTAGCCCTTTTTGAAAAACTTATTGAAACAGTTTTTCTCTATTCAGATAAACATTTGACTTATTTTTATCTTACATCCAAACTAACAATGTATTAGCAAAAAAAAATAGGTGCTATTCGTGAAAGATGGAAACTTTTGGAGGTTATTTCTTACAATTCTCCGACTTTTTCCTCTGTACTCATCTATTCTTTTAAAATTTTTCAGTGCAAGAAGATGGGCCATAAGTTGTCGCCATTTGGTTCTACCCACTAAACTTTATTTGGCCGTAAAAGGTTGGTTATTGCCCCCATGCAGATCAACTGTTGTAGTATCCGGGGGGGGCTCTCGCTCTCTTGCTCTCTTTTCAGCTGTTTGATTTTTTTTTTTCTGGAAGAGCCATACAAGAAGACGGAGCAAGATTAACCATTGCCATGTAAATTTTAAATGTATAAGAGTTTTCATTCTTCTTCCTTCGCAGTTTCACAAATATTCATGTCTGTAGGAATCAATATCAGTATCATTTATCCAAATAGTTATTGAAATCTGATTTTTGTCAGCTGTTAGTTCTTGTTAAGTTTAATTATGTCAATCATCATAGATAAAGTGAAAATTTATTCCATTTCATGGTTGTGTGTAGTTTCAATTTCAAATTTTGAATTGGGATTTTATATAATTTCTAACAGAAATATATGAGTTCCCTTGTTTTTAAATGACAACTTGATAAATGGTTATGTCCTCACTCTGAAGAAATGATACTGAGCTTGGTCTATAGAACATACTGGAGTTTGTAATTAGTAAAATATATGGTGCTTTGATAAGTAAATTGATGAACAAAATGATTGTTTCTTCCCCGAGGGATTACAAAAATAAAAGACTAAATATAGCATAGAACTGAATCTGCATCTCTTTATTTTCTGCATTTTTGCAAAATGTTATTGGCTTTATTTTAAAAAATATACCAAAAAGAAAAAATATTGTGTCTTTATCCAACTTTTTGGTACTTGCTAAAGTTGAAACATGATTTATGAACAGAAGGTTATGCTAATTATCATTTGAATTGAACTCGTTTAAACAATGGATTTAGTCTAGGTTTGAAGGTCCAAGTCTTCCTTCAACTTTGTGTTCGTTGTAGAATATATATAAAAAATAAACTAATTTGTATCGCTATTGGTTGTTATTAAAGTAAAAAATTGGTTTTCCAACCTCCTCTAAACACCCAATTTTCACTTTTTTTTTGGATTATGTTTATTAAAAATAAAAAGGGAGTTTATCTCCTAACTTAGAGGACAGTTTTCAAAACGAGAGTTTTGGGAGAGCTCGCGTGTATCTACTCGAAAGTAATAATATCATTCGAAAATGAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGGTGTCTGAAACTTTCATATGGATATTCTGTTTTATCCCTTCTTTTGATCTTTACTTTCTCTTTCAAAATTCGTCAGTCGTGCTCATGTTTGGGTTTTTTTTTTCAGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTTAACATTTCATTGGATTTCTCAACAACACTAACTTACTATTCTTCTCTTTTGCCTCTCACTCTTCGTGTTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGATGAATGTGTTCTATTCTTTCTCTTAATTTCTCCCCTACCCTTTTATTGTTTGTTTCTTTTGTCTCCCATTTCACGTCTTTCTGAAACTATAGTCTTGCAATGTTGGGCTAATTCGACCTAGATTCCATTACATGATGCAAAGAGTGAAGCTGTGAAAGGAACTTGGTTTTTTTAGGGATAGTTCTTGTATTACAACTGCCTGAAGCATGGGGAGTAGGAATTTCTCTCTTTCTTTCAGCGGCTCTTGTGAGTACAAGCATGCTCCTGCTTCTTGTTGGAGTGCATTACATAATCTTTTTATCATAACATACCATTTCTTTGATTAACCTATATTGGTTGCATTTCATTTGGTAACTTTCCTCTATCATGGCCTCTTGGTTCTCTTTCTATATTTATTTTTCCTTAATATATGGTTGCTTCTATTAAGAGAGAGAGAGATTTTGTTCATGCCTCCTCGTGGTTAGTGTTTGTATTGTATGTAAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGAATATTGGAGATGTTATGGCTTGTTATAGCATCTTTTTTTTTTTTTTTTTTTTTTTATTAATGCAACCCCATGGTTTTTCATTGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGATTGCTGATAATTAGGTGTCACGGTGTGATTCCCGAGTAGGACATTCTTGCCTCTTTGGTCCTGACATTAGGATGCAAGCACTATAGATAGTCAAAAACATTAGAGTATGTGGGGTTCTGGGTTCATTGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATGTTAGATCAGGCAGTTGTCTAGATGAAATTAGGCAAGATGTGTAAAACGGCTCTGATACTTCTTAGAAAAATAATTATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTAAGATGATCGATCACCTTCAACCAGACTTTTGCGGATCTCACTATTTGCTATTATTGGGATGCGAATTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTCGAAACAAATAGAATTCTGAGATCGTTCGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTTCTTCCAAAATTGAAGAATGAAATCTTTTTTGATATAGAATGACTTTGGGGAGAATTACTTAAGATCATGTATGGTTATTTTGTGAGTTTGCTATGTTGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAATTGCGCTTGCCTCATGAGTTTTTTTCTAACCAAATATAGCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCCATCCAACATTCCCAAAAGGAGGGAAGATTATTATCGACAAACTTCTGAAACCATTAGAAAGTTGCTTTTATGAACTCCATTTGTTGTTTTCCATGATATAAAGCAT

mRNA sequence

ATGGAGAAGTCTAGATCTAAGAGGAATTACTACTATGACCACCAAGACTTTGATTCCGAGTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCCAATAATAATTATCGTCATCGTGGAAATGCTGTTCGACCCTCTAAACCTCAAGACCAATCTCTTATGGTCACCACTACTTACAGGATACTTTGTCATGATGCTAAAGCTGGGGGAGTTATTGGCAAATCTGGTAGTATTATTAAGTCTATAAGGCAGCATACCGGCGCGTGGATCAACGTGCATGAGCTTGTTCCTGGTGATGAGGAGAGGATAATTGAGATTTCGGACACACGGCGGCGGGACCCAGAAGGTCGGATGCCGTCGTTCTCTCCGGCTCAAGAAGCGCTTTTCCTGATTCATGAAAGGATTCTTGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGGTATGGTCCTGAGGATGAGGAGGATGATTATGGTGGTGTTAGAGGAGGAGGTGGGAGCGGTTGCGGTGGTCGTGTGGCGACGAGGCTTGTTGTATCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGATTGTTGGAGATACAAATGCTGTTAAAAAAGCTATAGCTATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGATCGTAGTCATTTCCATGGGCGTCTACATTCACCAGAGCGCATTTTCCCTCCCGATGATGATTATGTTCCACATAACGCACGGCGATTACCAATGGATGGACGGCCATTTAGACCACGCATGTCTGCTTCTAATTCAAGAGGCAATGACTATTCCAACCGTCAGTCTAATTTTATGGTGGAGCCTGGGGCTGCTCCTGTAAACGACAATATGATGCCCTTTTATGGCGAGGACCTTGTATTTAGAATATTATGCCCAATTGAGAAGATAGATAGTGTTATTGGAGAGTCTAATGGAATCATTGAATTACTTCGTAACGATGTTGGTGTGGATATCAAGGTTTCTGATCCTGTGACTGGTTCGAATGAACAGATTCTTATCATTTCCTCGGATGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGATAAGGAGAACATTGTAACTACTAGGTTACTTGTACCATCAAGTGATATTGGATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACCGGTGCGAATGTACATATTGTGCCAAGAGAAGATCTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGGTTTGTCATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTCGAGTTAACATCAAGATTACGGAATTGCCTTTATAAGGAGCCGTTCCAAAAAGATGCAAGCCCTCAAGTATCAGTACAAAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAACGCTGCAGCTCGTGAAGTTCATAGTGGAAATGATTCTGCAAGCACAGCTTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGAAACTGGAGGATCGAGCAATGAAACTGGTACGCAGAATGAAAATGATCGACGTGAAGATTTGCCTAGTGGGTTAAATAGATCAATAACTGTTCATTCACCTCTTAGGATACCTGTGCCACTTGTCACCCGGAGTACGCTCGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGCGAGTTATCCGGAGCCAATGTTATGTTGGTAGAAGATAGACCAGATGTAACCCAGAAAATAATTCAAATATCAGGCACACCGGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTGTGCTATTCGTGAAAGATGGAAACTTTTGGAGAGCCATACAAGAAGACGGAGCAAGATTAACCATTGCCATTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAATTGCGCTTGCCTCATGAGTTTTTTTCTAACCAAATATAGCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCCATCCAACATTCCCAAAAGGAGGGAAGATTATTATCGACAAACTTCTGAAACCATTAGAAAGTTGCTTTTATGAACTCCATTTGTTGTTTTCCATGATATAAAGCAT

Coding sequence (CDS)

ATGTACATATTGTGCCAAGAGAAGATCTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGGTTTGTCATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTCGAGTTAACATCAAGATTACGGAATTGCCTTTATAAGGAGCCGTTCCAAAAAGATGCAAGCCCTCAAGTATCAGTACAAAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAACGCTGCAGCTCGTGAAGTTCATAGTGGAAATGATTCTGCAAGCACAGCTTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGAAACTGGAGGATCGAGCAATGAAACTGGTACGCAGAATGAAAATGATCGACGTGAAGATTTGCCTAGTGGGTTAAATAGATCAATAACTGTTCATTCACCTCTTAGGATACCTGTGCCACTTGTCACCCGGAGTACGCTCGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGCGAGTTATCCGGAGCCAATGTTATGTTGGTAGAAGATAGACCAGATGTAACCCAGAAAATAATTCAAATATCAGGCACACCGGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTGTGCTATTCGTGAAAGATGGAAACTTTTGGAGAGCCATACAAGAAGACGGAGCAAGATTAACCATTGCCATTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGA

Protein sequence

MYILCQEKIFPCLYQGRMSLYRFVIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPLRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSCAIRERWKLLESHTRRRSKINHCHFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT

Homology

[Close]

BLAST of MELO3C019371.jh1 vs. NCBI nr
Match: TYK11290.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 668 bits (1723), Expect = 2.60e-233
Identity = 356/379 (93.93%), Postives = 356/379 (93.93%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILSCAIRERWKLLESHTRRRSKINHCHFLPLRIEANPRISPALN 264
           GTPEQAERAQSLLQGFILSCAIRERWKLLE             FLPLRIEANPRIS ALN
Sbjct: 651 GTPEQAERAQSLLQGFILSCAIRERWKLLE-------------FLPLRIEANPRISSALN 710

Query: 265 FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT 324
           FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT
Sbjct: 711 FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT 770

Query: 325 MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA 384
           MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA
Sbjct: 771 MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA 827

Query: 385 YAEDDPFKPGPHYLKQEFT 403
           YAEDDPFKPGPHYLKQEFT
Sbjct: 831 YAEDDPFKPGPHYLKQEFT 827

[Close]

BLAST of MELO3C019371.jh1 vs. NCBI nr
Match: KAA0050522.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 643 bits (1658), Expect = 2.18e-223
Identity = 347/380 (91.32%), Postives = 350/380 (92.11%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILSCAIRERWKLLESHTRRRSKINHCH-FLPLRIEANPRISPAL 264
           GTPEQAERAQSLLQGFILS        +        S ++    FLPLRIEANPRISPAL
Sbjct: 651 GTPEQAERAQSLLQGFILSYRTAMATPI--------STLSFASPFLPLRIEANPRISPAL 710

Query: 265 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 324
           NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI
Sbjct: 711 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 770

Query: 325 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 384
           TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD
Sbjct: 771 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 830

Query: 385 AYAEDDPFKPGPHYLKQEFT 403
           AYAEDDPFKPGPHYLKQEFT
Sbjct: 831 AYAEDDPFKPGPHYLKQEFT 833

[Close]

BLAST of MELO3C019371.jh1 vs. NCBI nr
Match: XP_008455983.1 (PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo])

HSP 1 Score: 349 bits (895), Expect = 1.22e-110
Identity = 190/199 (95.48%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILS 223
           GTPEQAERAQSLLQGFILS
Sbjct: 651 GTPEQAERAQSLLQGFILS 660

[Close]

BLAST of MELO3C019371.jh1 vs. NCBI nr
Match: XP_011651315.1 (RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN57655.1 hypothetical protein Csa_009601 [Cucumis sativus])

HSP 1 Score: 347 bits (889), Expect = 9.58e-110
Identity = 189/199 (94.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILS 223
           GTPEQAERAQSLLQGFILS
Sbjct: 651 GTPEQAERAQSLLQGFILS 660

[Close]

BLAST of MELO3C019371.jh1 vs. NCBI nr
Match: XP_016901917.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo])

HSP 1 Score: 313 bits (801), Expect = 2.00e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 248 FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 307
           FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 2   FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 61

Query: 308 FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 367
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 62  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 121

Query: 368 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 403
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 122 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy Swiss-Prot
Match: Q8VZV9 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.6e-47
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 264 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 323
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 324 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 383
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 384 AYAEDDPFKPGPHYLKQEFT 404
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-35
Identity = 106/203 (52.22%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLG----LEESSSNNNA 84
           I G+I+AAR+ALVELT  LR+ ++KE  QK+ +P  S  +T    G    +E +SSNN  
Sbjct: 462 ITGEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTI 521

Query: 85  AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITV 144
            +RE   G  S++   Q V         KE  GS  + G   E++ RE++P         
Sbjct: 522 QSRE---GPTSSNLNLQQVSTI--LPQFKEGFGSVAKAG---ESEHREEVPV-------- 581

Query: 145 HSPLRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKI 204
            +  R+ VPLVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+V +VEDRP+ TQ I
Sbjct: 582 -TTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNI 641

Query: 205 IQISGTPEQAERAQSLLQGFILS 224
           I+ISGTPEQAERAQSLLQGFILS
Sbjct: 642 IRISGTPEQAERAQSLLQGFILS 646

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05
Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 150 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 209
           +VT +T+E+ +P  A+  +  +    L Q+ ++SGA V++ E     + +II ISGTP+Q
Sbjct: 772 IVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQ 831

Query: 210 AERAQSLLQGFILS 224
            + AQ+LL  FIL+
Sbjct: 832 TQAAQNLLHAFILT 845

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)

HSP 1 Score: 668 bits (1723), Expect = 1.26e-233
Identity = 356/379 (93.93%), Postives = 356/379 (93.93%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILSCAIRERWKLLESHTRRRSKINHCHFLPLRIEANPRISPALN 264
           GTPEQAERAQSLLQGFILSCAIRERWKLLE             FLPLRIEANPRIS ALN
Sbjct: 651 GTPEQAERAQSLLQGFILSCAIRERWKLLE-------------FLPLRIEANPRISSALN 710

Query: 265 FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT 324
           FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT
Sbjct: 711 FRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLIT 770

Query: 325 MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA 384
           MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA
Sbjct: 771 MDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDA 827

Query: 385 YAEDDPFKPGPHYLKQEFT 403
           YAEDDPFKPGPHYLKQEFT
Sbjct: 831 YAEDDPFKPGPHYLKQEFT 827

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 643 bits (1658), Expect = 1.06e-223
Identity = 347/380 (91.32%), Postives = 350/380 (92.11%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILSCAIRERWKLLESHTRRRSKINHCH-FLPLRIEANPRISPAL 264
           GTPEQAERAQSLLQGFILS        +        S ++    FLPLRIEANPRISPAL
Sbjct: 651 GTPEQAERAQSLLQGFILSYRTAMATPI--------STLSFASPFLPLRIEANPRISPAL 710

Query: 265 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 324
           NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI
Sbjct: 711 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 770

Query: 325 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 384
           TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD
Sbjct: 771 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 830

Query: 385 AYAEDDPFKPGPHYLKQEFT 403
           AYAEDDPFKPGPHYLKQEFT
Sbjct: 831 AYAEDDPFKPGPHYLKQEFT 833

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C2V2 (KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 5.90e-111
Identity = 190/199 (95.48%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILS 223
           GTPEQAERAQSLLQGFILS
Sbjct: 651 GTPEQAERAQSLLQGFILS 660

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L6Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 4.64e-110
Identity = 189/199 (94.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 84
           IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE
Sbjct: 471 IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAARE 530

Query: 85  VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITVHSPL 144
           VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR        
Sbjct: 531 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNR-------- 590

Query: 145 RIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQIS 204
            IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQIS
Sbjct: 591 -IPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQIS 650

Query: 205 GTPEQAERAQSLLQGFILS 223
           GTPEQAERAQSLLQGFILS
Sbjct: 651 GTPEQAERAQSLLQGFILS 660

[Close]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E109 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 313 bits (801), Expect = 9.70e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 248 FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 307
           FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 2   FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 61

Query: 308 FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 367
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 62  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 121

Query: 368 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 403
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 122 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]

BLAST of MELO3C019371.jh1 vs. TAIR 10
Match: AT5G24314.1 (plastid transcriptionally active7 )

HSP 1 Score: 189.1 bits (479), Expect = 6.9e-48
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 264 NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 323
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 324 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 383
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 384 AYAEDDPFKPGPHYLKQEFT 404
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]

BLAST of MELO3C019371.jh1 vs. TAIR 10
Match: AT5G24314.2 (plastid transcriptionally active7 )

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-45
Identity = 94/148 (63.51%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 264 NFRPPFQVVARKQRNGEVSGRRVWRRRK--------LTKKDDMSIYKMDRIPFLEEQVRR 323
           N R  FQ         + +GRRVWRRR         LTKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 324 VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVN 383
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 384 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 404
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]

BLAST of MELO3C019371.jh1 vs. TAIR 10
Match: AT5G53060.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-36
Identity = 106/203 (52.22%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 25  IIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLG----LEESSSNNNA 84
           I G+I+AAR+ALVELT  LR+ ++KE  QK+ +P  S  +T    G    +E +SSNN  
Sbjct: 462 ITGEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTI 521

Query: 85  AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRSITV 144
            +RE   G  S++   Q V         KE  GS  + G   E++ RE++P         
Sbjct: 522 QSRE---GPTSSNLNLQQVSTI--LPQFKEGFGSVAKAG---ESEHREEVPV-------- 581

Query: 145 HSPLRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKI 204
            +  R+ VPLVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+V +VEDRP+ TQ I
Sbjct: 582 -TTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNI 641

Query: 205 IQISGTPEQAERAQSLLQGFILS 224
           I+ISGTPEQAERAQSLLQGFILS
Sbjct: 642 IRISGTPEQAERAQSLLQGFILS 646

[Close]

BLAST of MELO3C019371.jh1 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 53.1 bits (126), Expect = 5.9e-07
Identity = 30/94 (31.91%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 130 LPSGLNRSITV-HSPLRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVM 189
           +P  +N    + + P+    P++T + +E+VIP+  +  +  ++ + L  I ++SGANV+
Sbjct: 524 VPPDVNHGFALRNEPIGSENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVV 583

Query: 190 LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 223
           + + +   T+ ++ +SGT +QA  AQSLL  FIL
Sbjct: 584 VHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFIL 617

[Close]

BLAST of MELO3C019371.jh1 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 150 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 209
           +VT +T+E+ +P  A+  +  +    L Q+ ++SGA V++ E     + +II ISGTP+Q
Sbjct: 772 IVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQ 831

Query: 210 AERAQSLLQGFILS 224
            + AQ+LL  FIL+
Sbjct: 832 TQAAQNLLHAFILT 845

The following BLAST results are available for this feature:

BLAST of MELO3C019371.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11290.1	2.60e-233	93.93	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0050522.1	2.18e-223	91.32	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_008455983.1	1.22e-110	95.48	PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo]	[more]
XP_011651315.1	9.58e-110	94.97	RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN5...	[more]
XP_016901917.1	2.00e-103	100.00	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo]	[more]

BLAST of MELO3C019371.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZV9	9.6e-47	67.14	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT...	[more]
Q8W4B1	1.7e-35	52.22	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4KDN0	1.8e-05	37.84	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]

BLAST of MELO3C019371.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIV3	1.26e-233	93.93	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7U3Y9	1.06e-223	91.32	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3C2V2	5.90e-111	95.48	KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 P...	[more]
A0A0A0L6Q2	4.64e-110	94.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1	[more]
A0A1S4E109	9.70e-104	100.00	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of MELO3C019371.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24314.1	6.9e-48	67.14	plastid transcriptionally active7	[more]
AT5G24314.2	1.1e-45	63.51	plastid transcriptionally active7	[more]
AT5G53060.1	1.2e-36	52.22	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	5.9e-07	31.91	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	1.3e-06	37.84	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038958	Protein plastid transcriptionally active 7	PANTHER	PTHR37257	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 7	coord: 24..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019371.jh1.t1	MELO3C019371.jh1.t1	mRNA
MELO3C019371.jh1.t2	MELO3C019371.jh1.t2	mRNA
MELO3C019371.jh1.t3	MELO3C019371.jh1.t3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042793	plastid transcription
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding