MELO3C019353 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019353
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	acanthoscurrin-2-like isoform X2
Location	chr11: 12324138 .. 12325960 (+)
RNA-Seq Expression	MELO3C019353
Synteny	MELO3C019353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCCAAAGGTTTTGTATTTGTGTGTCTTCTTCTTGTGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACTGAGTCAACCCAAGATGAGCAACAAGGTATATTATTCTAATTCTAACTTTAATCTGTACACTACTTGCAAATTGTGATCATGAAAGTACATTTCATGGGGTTCTGAGTGTGGGGAAAATGACAAAGAATTAGAGTAACTCAAATAATTTTTAACTATTCGGCTAATATTTAGATTGGAAATTTTTCAATGCCATTCTTAGTTTTAAAAGAATAGGTGGATTTAAAAGATATTAATTAAATATTTTTTAGTTTAAAACATTTTTTTTTTAGATTTAAAGAATTTAGCTATAGCATCTCTCTCTTTAAATTTAGCTATAGCATCTCTCTCTTTAAATTTAGCTATAGCATCTCTCTCTTTAAATTTAGCTATAGCATCTCTCTATTTAAATTTAGCTATAGCATCTCTCTATTTAAATTTAGCTATAGCATCTCTCTATTTAAATTTAGCTATAGCATCTCTATCTATAAATTTATAGATGAGCTATAGAATCTCTATAGATGAGCTATAGCATCTCTATATATAAATTTAGCTAAGAAAAGAAAATAGTGCATAGCATCTCTATTTAAATTTACAAAATTTAAGAAAAGAAATAATAATGAAAATAGTGCATAGCATCTCTATTTAAATTTAGGAAATTTAAGAAAAGAAATAGTGCATAGCATCTCCATTTACATTTTGATAAGAAATAGTCTATAGCATCTCTATTTAAATTAAAAAAAAAAAAAAAACTATAATACCTATTTTTTTTTAAGACAAATGATCAGATATATCTAATGAAGGACCATCCATTTTTAGATTTACAAATCTTGTAGTAGAAAATTTAACCTATTGGTTACTTCTATAATTTAGAAAATACAGTTACATGTATTGTAATATTATATAATCTTTTGTTTTTTTGTTTTTTTTTTTTTTTTTCCCAACGAAAAAGGGAAAAAAAACTAATACTCTGGGTCAACTTTTTTTTATCAAAGTAATCACTCAAACAGTTAAGAAAGATGTGTTTTTTTGCCGACGCCAACGGGAAAAAGACTAATACTCTGGGTAAACTTTTTTTTTTACCAAGTAATCACTCAAACCGTTGAGAAAGAAGATAAATTAGGAATAAAGAAAAAGGAGAAAATAAAAAGTCTTGAGCCCTTAGGCTTGAAAAAAAGAAGTTGGTAGGTGAAGATGAATAGTATTCAACGGAGGAATAATTAAAAAATGTTTAATTAATGAAGTTAGAGACCTTCTCAACCTCTACTGAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAATCGAAGGATTGAAATGGTTAAATTGTATGAATTTTTGTTTGGACAAAATAGATATATTTTGTCCATTCTTAGGATGCTTTTAAATAATAATTAAAGGAAAGAACTTCCATGCTGCTTAAATTGTATGAATTTTTGTTACTAACTGTTGCATTTGATATTCTTGGCTCCCAGTGAATCTAGCCAATGACATAGAAGAGTCTAAAAATAGACAAGGTGGCGGTGGCAGTTATGGAGGAGGCGGCGGAGGGTCTAGTGGAGGAGGATCTAGCGGTGGCGGTTATGGTGGAGGTGGGTCTGGTGGTGGTGGCATGGGCAGTGGAGGATCTGGCGGGGGCGGTCAAGGAGGCAGCGGTGGTGGAGGGTCCGGCGGCGGAGGCGGTTATGGAGGAGGTGGGAAAGGAGGGGGAGGGAAAGGTGGAGGAGGTAGTGGATCGAGCGGTGGTGGTAAAGGGGGCGGAGGAAGTGG

mRNA sequence

ATGAAGTCCAAAGGTTTTGTATTTGTGTGTCTTCTTCTTGTGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACTGAGTCAACCCAAGATGAGCAACAAGTGAATCTAGCCAATGACATAGAAGAGTCTAAAAATAGACAAGGTGGCGGTGGCAGTTATGGAGGAGGCGGCGGAGGGTCTAGTGGAGGAGGATCTAGCGGTGGCGGTTATGGTGGAGGTGGGTCTGGTGGTGGTGGCATGGGCAGTGGAGGATCTGGCGGGGGCGGTCAAGGAGGCAGCGGTGGTGGAGGGTCCGGCGGCGGAGGCGGTTATGGAGGAGGTGGGAAAGGAGGGGGAGGGAAAGGTGGAGGAGGTAGTGGATCGAGCGGTGGTGGTAAAGGGGGCGGAGGAAGTGG

Coding sequence (CDS)

ATGAAGTCCAAAGGTTTTGTATTTGTGTGTCTTCTTCTTGTGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACTGAGTCAACCCAAGATGAGCAACAAGTGAATCTAGCCAATGACATAGAAGAGTCTAAAAATAGACAAGGTGGCGGTGGCAGTTATGGAGGAGGCGGCGGAGGGTCTAGTGGAGGAGGATCTAGCGGTGGCGGTTATGGTGGAGGTGGGTCTGGTGGTGGTGGCATGGGCAGTGGAGGATCTGGCGGGGGCGGTCAAGGAGGCAGCGGTGGTGGAGGGTCCGGCGGCGGAGGCGGTTATGGAGGAGGTGGGAAAGGAGGGGGAGGGAAAGGTGGAGGAGGTAGTGGATCGAGCGGTGGTGGTAAAGGGGGCGGAGGAAGT

Protein sequence

MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGGGGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSGGGGGYGGGGKGGGGKGGGGSGSSGGGKGGGGS

Homology

[Close]

BLAST of MELO3C019353 vs. NCBI nr
Match: KAE8652267.1 (hypothetical protein Csa_022106 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-24
Identity = 124/142 (87.32%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGGGGG 60
           MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLA+D+EE K   GGGGSYGGGGG
Sbjct: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLAHDLEEPKYTHGGGGSYGGGGG 60

Query: 61  GSSGGGSSGGGY------GGGGSGGGGMGSGGSGGGGQGGSGGGGSGGGGGYGGGGKGGG 120
           GSSGGGSSGGGY      GGGGSGGGG GSGGSGGGGQGGSGGGGSGGGG YGGGGKGGG
Sbjct: 61  GSSGGGSSGGGYGGGGSHGGGGSGGGGQGSGGSGGGGQGGSGGGGSGGGGSYGGGGKGGG 120

Query: 121 ---GKGGGGSGSSGGGKGGGGS 134
              G GGGGSGSSGGGKGGGGS
Sbjct: 121 GGKGGGGGGSGSSGGGKGGGGS 142

[Close]

BLAST of MELO3C019353 vs. NCBI nr
Match: XP_031737067.1 (acanthoscurrin-2 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-24
Identity = 124/142 (87.32%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGGGGG 60
           MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLA+D+EE K   GGGGSYGGGGG
Sbjct: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLAHDLEEPKYTHGGGGSYGGGGG 60

Query: 61  GSSGGGSSGGGY------GGGGSGGGGMGSGGSGGGGQGGSGGGGSGGGGGYGGGGKGGG 120
           GSSGGGSSGGGY      GGGGSGGGG GSGGSGGGGQGGSGGGGSGGGG YGGGGKGGG
Sbjct: 61  GSSGGGSSGGGYGGGGSHGGGGSGGGGQGSGGSGGGGQGGSGGGGSGGGGSYGGGGKGGG 120

Query: 121 ---GKGGGGSGSSGGGKGGGGS 134
              G GGGGSGSSGGGKGGGGS
Sbjct: 121 GGKGGGGGGSGSSGGGKGGGGS 142

[Close]

BLAST of MELO3C019353 vs. NCBI nr
Match: XP_022971102.1 (acanthoscurrin-2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 74.3 bits (181), Expect = 8.7e-10
Identity = 101/151 (66.89%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGG--- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQ N+A ++EE+K+  GGGG  GG   
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61  --------------GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG-G 120
                         GGGGS GGG  GGGYGGGGSGG G G GG GGGG GG G GG G G
Sbjct: 61  GGGQGGSGSGGGSHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGYGGGGSGGGGKG 120

Query: 121 GGGYGGGGKGGGGKGGGGSGSSGGGKGGGGS 134
           GGGYGGGG GGGGKGGGG GS GGGKGGGGS
Sbjct: 121 GGGYGGGGSGGGGKGGGGGGSGGGGKGGGGS 149

[Close]

BLAST of MELO3C019353 vs. NCBI nr
Match: XP_023534315.1 (acanthoscurrin-2-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-09
Identity = 102/138 (73.91%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQV--NLANDIEESKNRQGGGGSYGG- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQV  N+A ++EE+K+  GGGG  GG 
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQVSENVAQEVEEAKHGHGGGGYGGGG 60

Query: 61  -GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG-GGGGYGGGGKGGGG 120
            GGGG  G GS GGG+GGGGSGGGG G GG GGGG GGSG GG G GGGGYGGGG GGGG
Sbjct: 61  SGGGGQGGSGSGGGGHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGYGGGGSGGGG 120

Query: 121 KGGGGSGSSGGGKGGGGS 134
           KGGGGSG  GGGKGGGGS
Sbjct: 121 KGGGGSG--GGGKGGGGS 134

[Close]

BLAST of MELO3C019353 vs. NCBI nr
Match: XP_023534314.1 (acanthoscurrin-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 71.6 bits (174), Expect = 5.6e-09
Identity = 102/151 (67.55%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGG--- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQ N+A ++EE+K+  GGGG  GG   
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61  --------------GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG-G 120
                         GGGGS GGG  GGGYGGGGSGG G G GG GGGG GGSG GG G G
Sbjct: 61  GGGQGGSGSGGGGHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGSGGSGSGGGGKG 120

Query: 121 GGGYGGGGKGGGGKGGGGSGSSGGGKGGGGS 134
           GGGYGGGG GGGGKGGGGSG  GGGKGGGGS
Sbjct: 121 GGGYGGGGSGGGGKGGGGSG--GGGKGGGGS 147

[Close]

BLAST of MELO3C019353 vs. ExPASy TrEMBL
Match: A0A6J1I123 (acanthoscurrin-2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10
Identity = 101/151 (66.89%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNRQGGGGSYGG--- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQ N+A ++EE+K+  GGGG  GG   
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61  --------------GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG-G 120
                         GGGGS GGG  GGGYGGGGSGG G G GG GGGG GG G GG G G
Sbjct: 61  GGGQGGSGSGGGSHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGYGGGGSGGGGKG 120

Query: 121 GGGYGGGGKGGGGKGGGGSGSSGGGKGGGGS 134
           GGGYGGGG GGGGKGGGG GS GGGKGGGGS
Sbjct: 121 GGGYGGGGSGGGGKGGGGGGSGGGGKGGGGS 149

[Close]

BLAST of MELO3C019353 vs. ExPASy TrEMBL
Match: A0A6J1I2D6 (acanthoscurrin-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09
Identity = 102/153 (66.67%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQV--NLANDIEESKNRQGGGGSYGG- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQV  N+A ++EE+K+  GGGG  GG 
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQVSENVAQEVEEAKHGHGGGGYGGGG 60

Query: 61  ----------------GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG 120
                           GGGGS GGG  GGGYGGGGSGG G G GG GGGG GG G GG G
Sbjct: 61  SGGGGQGGSGSGGGSHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGYGGGGSGGGG 120

Query: 121 -GGGGYGGGGKGGGGKGGGGSGSSGGGKGGGGS 134
            GGGGYGGGG GGGGKGGGG GS GGGKGGGGS
Sbjct: 121 KGGGGYGGGGSGGGGKGGGGGGSGGGGKGGGGS 151

[Close]

BLAST of MELO3C019353 vs. ExPASy TrEMBL
Match: A0A6J1I5V7 (acanthoscurrin-2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08
Identity = 100/137 (72.99%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQV--NLANDIEESKNRQGGGGSYGG- 60
           MKSKGF+ VCLLLVSALVVSWAIE+HT  ++DEQQV  N+A ++EE+K+  GGGG  GG 
Sbjct: 1   MKSKGFLLVCLLLVSALVVSWAIEAHT--SEDEQQVSENVAQEVEEAKHGHGGGGYGGGG 60

Query: 61  -GGGGSSGGGSSGGGYGGGGSGGGGMGSGGSGGGGQGGSGGGGSG-GGGGYGGGGKGGGG 120
            GGGG  G GS GG +GGGGSGGGG G GG GGGG GGSG GG G GGGGYGGGG GGGG
Sbjct: 61  SGGGGQGGSGSGGGSHGGGGSGGGGQGGGGYGGGGSGGSGSGGGGKGGGGYGGGGSGGGG 120

Query: 121 KGGGGSGSSGGGKGGGG 133
           KGGGGSG  GGGKGGGG
Sbjct: 121 KGGGGSG--GGGKGGGG 133

[Close]

BLAST of MELO3C019353 vs. ExPASy TrEMBL
Match: A0A5A7UDI4 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00670 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08
Identity = 99/137 (72.26%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNR--QGGGGSYGGG 60
           MKSKGF+FVCLLLVSAL VSWA+ES T+  Q++QQV  A+D+ E+K+R   GGGG YGGG
Sbjct: 1   MKSKGFLFVCLLLVSALAVSWAVESRTQPIQNDQQV--AHDVGEAKHRGGSGGGGGYGGG 60

Query: 61  GGGSSGGGSSGGGYGGGG-SGGGGMGSGGSGGGGQGGSG-GGGSGGGGGYGGGGKGGGGK 120
           GGGSSGGGS GGG GGGG SGGGG GSGGSGGGG GG G GGG  GGGG+GGGG  GGG+
Sbjct: 61  GGGSSGGGSGGGGSGGGGSSGGGGSGSGGSGGGGHGGGGQGGGGSGGGGHGGGGSSGGGQ 120

Query: 121 GG--GGSGSSGGGKGGG 132
           GG  GG GS GGG+GGG
Sbjct: 121 GGGHGGGGSGGGGQGGG 135

[Close]

BLAST of MELO3C019353 vs. ExPASy TrEMBL
Match: A0A1S4E0T9 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103496044 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 102/144 (70.83%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLANDIEESKNR--QGGGGSYGGG 60
           MKSKGF+FVCLLLVSAL VSWA+ES T+  Q++QQV  A+D+EE+K++   GGGG YGGG
Sbjct: 1   MKSKGFLFVCLLLVSALAVSWAVESRTQPIQNDQQV--AHDVEEAKHKGGSGGGGGYGGG 60

Query: 61  GGGSSGGGSSGGGYGGGG-SGGGGMGSGGSGGGGQG----GSGGGGSGG---GGGYGGGG 120
           GGGSSGGGS GGG GGGG SGGGG G GGSGGGG G    G GGGGSGG   GGG+GGGG
Sbjct: 61  GGGSSGGGSGGGGSGGGGSSGGGGSGGGGSGGGGYGGGGHGGGGGGSGGGGQGGGHGGGG 120

Query: 121 KGGGGKGG--GGSGSSGGGKGGGG 133
            GGGG+GG  GG GS GGG+GGGG
Sbjct: 121 SGGGGQGGGHGGGGSGGGGQGGGG 142

The following BLAST results are available for this feature:

BLAST of MELO3C019353 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652267.1	8.1e-24	87.32	hypothetical protein Csa_022106 [Cucumis sativus]	[more]
XP_031737067.1	8.1e-24	87.32	acanthoscurrin-2 [Cucumis sativus]	[more]
XP_022971102.1	8.7e-10	66.89	acanthoscurrin-2-like isoform X2 [Cucurbita maxima]	[more]
XP_023534315.1	3.3e-09	73.91	acanthoscurrin-2-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023534314.1	5.6e-09	67.55	acanthoscurrin-2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C019353 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I123	4.2e-10	66.89	acanthoscurrin-2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=...	[more]
A0A6J1I2D6	2.7e-09	66.67	acanthoscurrin-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=...	[more]
A0A6J1I5V7	1.8e-08	72.99	acanthoscurrin-2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=...	[more]
A0A5A7UDI4	1.8e-08	72.26	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]
A0A1S4E0T9	2.3e-08	70.83	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103496044 PE=4 SV=1	[more]

BLAST of MELO3C019353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010800	Glycine rich protein	PFAM	PF07172	GRP	coord: 1..91 e-value: 1.0E-7 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019353.1	MELO3C019353.1	mRNA