MELO3C019336 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019336
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 11871007 .. 11871249 (-)
RNA-Seq Expression	MELO3C019336
Synteny	MELO3C019336

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGCACAGAAGAGATGAGATTTACAAGCAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTTTGCTGCGTGGGTCGTCGTCAGCGTGGGTCGTCACGGAATGGGTCATCGCGGAATGGGTGGTCGCGGCGTGGGTCGACGCGGAATGGGTCGTTCGGCGTGGGTCGTCGCGGCGTCGACGTGGGTCTTCGCGGCGTGGGTCGTGGGCATGGGTGTCGCGGAAGGTTGGGTCATCGTGGGTAA

mRNA sequence

CAAATGCACAGAAGAGATGAGATTTACAAGCAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTTTGCTGCGTGGGTCGTCGTCAGCGTGGGTCGTCACGGAATGGGTCATCGCGGAATGGGTGGTCGCGGCGTGGGTCGACGCGGAATGGGTCGTTCGGCGTGGGTCGTCGCGGCGTCGACGTGGGTCTTCGCGGCGTGGGTCGTGGGCATGGGTGTCGCGGAAGGTTGGGTCATCGTGGGTAA

Coding sequence (CDS)

ATGCACAGAAGAGATGAGATTTACAAGCAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTTTGCTGCGTGGGTCGTCGTCAGCGTGGGTCGTCACGGAATGGGTCATCGCGGAATGGGTGGTCGCGGCGTGGGTCGACGCGGAATGGGTCGTTCGGCGTGGGTCGTCGCGGCGTCGACGTGGGTCTTCGCGGCGTGGGTCGTGGGCATGGGTGTCGCGGAAGGTTGGGTCATCGTGGGTAA

Protein sequence

MHRRDEIYKQGRSESSRVGVCCVGRRQRGSSRNGSSRNGWSRRGSTRNGSFGVGRRGVDVGLRGVGRGHGCRGRLGHRG

Homology

[Close]

BLAST of MELO3C019336 vs. ExPASy TrEMBL
Match: A0A5A7UVP7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00720 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.8e-04
Identity = 39/71 (54.93%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  MHRRDEIYKQGRSESSRVGVCCVGRRQRGSSRNGSSRNGWSRRGSTRN-GSFGVGRRGVD 60
          M+RRDEIY+QGRSESSRVGVCCVGRR  G         G    G+ R+ G   VG RG  
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGC-------GVGGHGTCRDVGGHDVGCRG-- 60

Query: 61 VGLRGVGRGHG 71
          +G RGVG   G
Sbjct: 61 MGRRGVGLAEG 62

[Close]

BLAST of MELO3C019336 vs. ExPASy TrEMBL
Match: A0A5D3BTP1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00130 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.8e-04
Identity = 39/71 (54.93%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  MHRRDEIYKQGRSESSRVGVCCVGRRQRGSSRNGSSRNGWSRRGSTRN-GSFGVGRRGVD 60
          M+RRDEIY+QGRSESSRVGVCCVGRR  G         G    G+ R+ G   VG RG  
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGC-------GVGGHGTCRDVGGHDVGCRG-- 60

Query: 61 VGLRGVGRGHG 71
          +G RGVG   G
Sbjct: 61 MGRRGVGLAEG 62

The following BLAST results are available for this feature:

BLAST of MELO3C019336 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C019336 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C019336 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVP7	7.8e-04	54.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BTP1	7.8e-04	54.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of MELO3C019336 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019336.1	MELO3C019336.1	mRNA