MELO3C019266 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019266
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DUF4228 domain protein
Location	chr11: 10257542 .. 10258382 (+)
RNA-Seq Expression	MELO3C019266
Synteny	MELO3C019266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTCTCATGTGCTCTTTATTCTTCTCTCTCTCTCTCTCTCTCTCTATAAATTCACCAAATTCAGTCTACACATTCAGTACTCAACATTTATTCGTTTCAATTTCTGCAATTCTCCATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGAATTGAAAGTTCTCTTGAGATCTGATGATCTCTTTAGTTTTCGTTAACAAATCTGTGAAATATTAGTGTAATTATTGTATAGGTGTGTTATTTAATTAATATCACCAAAACTGTTAGGGAATATCTGTGTGGATGTGATTCTTAGAAGGTAGAGAGTTGTGTGTTTCTTGAAGAACAATATGCTATATAGGGTGATAGTTTATACTAAGTAATTTTTGTAATAATCGTAGTTACATTTTTGAGATGCGATGGGAATAACAGCTTGATATACTTTATAG

mRNA sequence

GCTTTCTCATGTGCTCTTTATTCTTCTCTCTCTCTCTCTCTCTCTCTATAAATTCACCAAATTCAGTCTACACATTCAGTACTCAACATTTATTCGTTTCAATTTCTGCAATTCTCCATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGAATTGAAAGTTCTCTTGAGATCTGATGATCTCTTTAGTTTTCGTTAACAAATCTGTGAAATATTAGTGTAATTATTGTATAGGTGTGTTATTTAATTAATATCACCAAAACTGTTAGGGAATATCTGTGTGGATGTGATTCTTAGAAGGTAGAGAGTTGTGTGTTTCTTGAAGAACAATATGCTATATAGGGTGATAGTTTATACTAAGTAATTTTTGTAATAATCGTAGTTACATTTTTGAGATGCGATGGGAATAACAGCTTGATATACTTTATAG

Coding sequence (CDS)

ATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGA

Protein sequence

MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGRATTVSDEIGSWKPALECIPEGEGDLHK

Homology

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BLAST of MELO3C019266 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 7.0e-77
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120

Query: 121 RATTVSDEIGSWKPALECIPEGEGDLHK 149
           RATTVSDEIGSWKPALECIPEGEGDLHK
Sbjct: 121 RATTVSDEIGSWKPALECIPEGEGDLHK 148

[Close]

BLAST of MELO3C019266 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 5.1e-59
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEEE+D+E RNSG DSG GVLRIKVVISQKELK+ILK+RENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEKDEEGRNSG-DSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKG 120

Query: 121 RATTVS-DEIGSWKPALECIPEGEGDL 147
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVSADETGSWKPALECIPEGESTL 145

[Close]

BLAST of MELO3C019266 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-37
Identity = 100/151 (66.23%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTG--GAAGKKV 60
           MGN CF++NKVMAQD+  D LPP   IEA+KVEE+P RPGSAMAKPK      G A KKV
Sbjct: 1   MGNNCFKSNKVMAQDEPEDLLPP---IEAKKVEEKP-RPGSAMAKPKTAEARTGGASKKV 60

Query: 61  VRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKV 120
           VRF LQEEEE    +NSGD    GVLRIKVV+SQKELK++LK+RENNSC+LEELI ELKV
Sbjct: 61  VRFKLQEEEE----KNSGD---GGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKV 120

Query: 121 KGRAT-------TVSDEIGSWKPALECIPEG 143
           KGR T        V DE G WKP LE IPEG
Sbjct: 121 KGRTTISDGRIDAVEDENGRWKPDLEGIPEG 140

[Close]

BLAST of MELO3C019266 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.8 bits (390), Expect = 5.6e-34
Identity = 95/155 (61.29%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDS---YDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNG---TGGAA 60
           MGN CF++NKVMAQD+S     N PP   +EA+KVEE+P+  GSAMAKPK     +G AA
Sbjct: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPV-AGSAMAKPKTAEERSGAAA 60

Query: 61  GKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIE 120
           GKKVVRF LQEE+E+    + GD   AGVLRIKVV+SQ+ELK+ILK  EN+S SLEELI 
Sbjct: 61  GKKVVRFKLQEEDEN-SGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIA 120

Query: 121 ELKVKGRATT-------VSDEIGSWKPALECIPEG 143
           E KVKGR T        V DE GS +PALECIPEG
Sbjct: 121 EFKVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150

[Close]

BLAST of MELO3C019266 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-24
Identity = 82/156 (52.56%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTG--GAAGKK 60
           MGN C R N+VMAQD++    P     E   KVE++P   GSA+A+PK       A  KK
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARRKK 102

Query: 61  VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120
           VVRF      + +ED  SG   G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK
Sbjct: 103 VVRF------QQREDEISG--GGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELK 162

Query: 121 VKG------RATTVSDEIGSWKPALECIPEGEGDLH 148
           +KG      RA    DE GSW+PALE IPE   DLH
Sbjct: 163 MKGRTISDARADNEEDENGSWRPALESIPE---DLH 185

[Close]

BLAST of MELO3C019266 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.4e-77
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120

Query: 121 RATTVSDEIGSWKPALECIPEGEGDLHK 149
           RATTVSDEIGSWKPALECIPEGEGDLHK
Sbjct: 121 RATTVSDEIGSWKPALECIPEGEGDLHK 148

[Close]

BLAST of MELO3C019266 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.5e-59
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEEE+D+E RNSG DSG GVLRIKVVISQKELK+ILK+RENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEKDEEGRNSG-DSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKG 120

Query: 121 RATTVS-DEIGSWKPALECIPEGEGDL 147
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVSADETGSWKPALECIPEGESTL 145

[Close]

BLAST of MELO3C019266 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.6e-24
Identity = 82/156 (52.56%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTG--GAAGKK 60
           MGN C R N+VMAQD++    P     E   KVE++P   GSA+A+PK       A  KK
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARRKK 102

Query: 61  VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120
           VVRF      + +ED  SG   G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK
Sbjct: 103 VVRF------QQREDEISG--GGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELK 162

Query: 121 VKG------RATTVSDEIGSWKPALECIPEGEGDLH 148
           +KG      RA    DE GSW+PALE IPE   DLH
Sbjct: 163 MKGRTISDARADNEEDENGSWRPALESIPE---DLH 185

[Close]

BLAST of MELO3C019266 vs. ExPASy TrEMBL
Match: A0A6A4P389 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0135851 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.5e-13
Identity = 61/157 (38.85%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQD-DSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
           MGN C R NK+ AQD ++Y+     Q    ++ + + ++  S     ++     + KK V
Sbjct: 1   MGN-CLRNNKISAQDLENYET----QVESCDEAKVEKVKASSLSNLKESVQKEQSTKKKV 60

Query: 61  RFNLQEEEEDQ---EDRNSGDDSGAGVLRIKVVISQKELKEIL--KNRENNSCSLEELIE 120
           RFN+Q +++D    EDR S D+S  GV+RIKVV+++KELK +L  KN E+N+ SL++L+ 
Sbjct: 61  RFNVQNDDDDDDEGEDRGSDDNSRNGVVRIKVVMTRKELKRVLSCKNEEHNT-SLDQLLS 120

Query: 121 ELKVKGRATTVSDEI----GSWKPALECIPEGEGDLH 148
            LK +GR + V   I     S +PALE IPE     H
Sbjct: 121 ALKFRGRVSKVCGYINVGTSSLRPALESIPENRLIFH 151

[Close]

BLAST of MELO3C019266 vs. ExPASy TrEMBL
Match: A0A6P4N7W7 (uncharacterized protein LOC108465124 OS=Gossypium arboreum OX=29729 GN=LOC108465124 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 57/158 (36.08%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 1   MGNICFRTNKVMAQDDSYDNL---PPDQFI---------EAEKVEEQPLRPGSAMAKPKN 60
           MGN CF +NK++A++D         P+Q I         ++E   +      + M K  N
Sbjct: 1   MGN-CFTSNKILAENDDPQGCSCNQPNQLIKDMGDVTVSKSEGAADGVKTNNNNMEKKTN 60

Query: 61  GTGGAAGKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEIL-KNRENNSC 120
                  KKVVRFNL+EE    +     D+S  GV+RI++V++Q+ELK+IL  N++    
Sbjct: 61  NK-----KKVVRFNLKEENSGDDRSGKQDESKNGVVRIRLVVTQEELKQILSSNKDLRQS 120

Query: 121 SLEELIEELKVKGRATTVSDE----IGSWKPALECIPE 142
           S+E+LI+ +K++G    VS++     G+W+PALE IPE
Sbjct: 121 SMEQLIKAVKLRG--VRVSEDGRTSDGAWRPALESIPE 150

[Close]

BLAST of MELO3C019266 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.6e-05
Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 68  EDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGRATTVSD 127
           E++ +R++ ++S   V+RIKVV+++KEL++IL   +N   S+++L+  LK  GR  +++ 
Sbjct: 38  EEESERSTEEES--KVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGRNISMAS 97

Query: 128 ------EIG--SWKPALECIPE 142
                 E G  +W+P LE IPE
Sbjct: 98  YEEDEKEEGDENWRPTLESIPE 116

The following BLAST results are available for this feature:

BLAST of MELO3C019266 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24218.1	7.0e-77	100.00	hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]	[more]
KGN63254.1	5.1e-59	84.35	hypothetical protein Csa_022493 [Cucumis sativus]	[more]
XP_038902397.1	2.4e-37	66.23	uncharacterized protein LOC120089037 [Benincasa hispida]	[more]
KAG6570883.1	5.6e-34	61.29	hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022140639.1	5.3e-24	52.56	uncharacterized protein LOC111011249 [Momordica charantia]	[more]

BLAST of MELO3C019266 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DKZ8	3.4e-77	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LQE9	2.5e-59	84.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1	[more]
A0A6J1CG85	2.6e-24	52.56	uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6A4P389	4.5e-13	38.85	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0135851 PE=4 SV=1	[more]
A0A6P4N7W7	1.9e-11	36.08	uncharacterized protein LOC108465124 OS=Gossypium arboreum OX=29729 GN=LOC108465...	[more]

BLAST of MELO3C019266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21680.1	2.6e-05	36.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..81
None	No IPR available	PANTHER	PTHR33148:SF55	OS01G0219300 PROTEIN	coord: 1..142
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019266.1	MELO3C019266.1	mRNA