MELO3C019142.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019142.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RING-type E3 ubiquitin transferase
Location	chr08: 12944423 .. 12947283 (+)
RNA-Seq Expression	MELO3C019142.jh1
Synteny	MELO3C019142.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCGCTCCTCTCTCGACCTCGTAGCCCAAAGCCTGGGTTAACCCATCCGCTCTGTCTTCTTCTTCTCTCTCTCTCTCCTCTCTCCGTTTGTTCAGTTCAAGAAAAGGGAAATTGGGTTGATCCACTTTTCTCTTTCGTCTTCCTAAAGGTGAATTTCTGCTGCTACCCATTTTCTAGGGTTCCCTTTTCCTCCATCTTTTTCTGCAATTCAATGCCTCTCTAACAGTTTTACCTTCTTTTTCTGTCTCTTTTCTCGTTTTCAGTTTGCGGGTCTTTGTTGTTCTCAATCTTTGTTGCTTGAGTTGTTTGGGGAATTTATTGAAATGGGTGGGTACTGTTTGGATCTTTCTTGGTGGGTGTCTTTCATTCGTTTCTATGGCTCATTTGGAATGAAAATATTGAGTTGTGTTGGGCTTTTACGTTGTGTGTAGTGGGAACTTTTGAAGTTTTGTTCTTGTATGCTTTGTTTGGACTATGGAATATAGTTTCAATTTTTTTCGTTTCTTGCTTTGTATTTGGTGAAATCGGTCTCAACTTGGGCAGAAATTAATGCCCTCAACTAAGTTAAGCTCTCATTTTTCTATTTCCTTAAGAATTTGGCTAATTATACGATGATTTCTGTGGCTGGAGTAGAATGTTTTTGTGACTGTTGGTGGGATTTGGGCATTTATGTGTTTAAAATTTTTTGTTGTTCTGTTGGATGAATTTGGTATGATTGATTTATTTCAATCTTTACTCAATCGTGAGTACTTTTTTAATATAGTTTTTAGAAGGTATTAGTTGTACCACTTCTTTCGATAGTGTACAATTTTCCGACTTTAGTATAGTCCAAGTGGTTAAGACAATTGCTCTCAACCAAGAGGGCTAAAGATAGGTTCGAATCATCAGCCCACTTGTTTTTTTTTTTTTTTACTAAGAATTAAACACAAAACAAACAAAAAAAAATGAGTCATCTATCTTCATTTTTATGTGAACAGAGTTAAATTCTAAGCGCTGAGATATTTCATGAGATCTTGGGTACTTTTTGTCTGAAGAGTATGTCCCCATCTTTCCATAGTTAAACAAGGATAGTTAGACTGAAGATGAGTAGGCCTAGCAGTATGTATGCTTGCTAGCAGCCATGTAATTTCATCGGAGTGGAGTTCTTTTGTAAATGTTCCATTCATTGCCTTGGGACTTAGCTCAATCTTCTAATGTTTCGTTAAAATCTAAAAAATGATGGAAGTATGGACATCATATAGGGTTATGTTTGTGCAAGTATGTTTTTGTTGAAAAACCAAAAAACGGACTACAAATGGTATCAAGAGTGTGGTAGATGAAAAATATGAAGTGTTTGATCTCTGGGTTTTCTGATTGTTATATATGCATAAACGATAAATTTTGTTGATGGTTGGATCTGAGTGGTATGTATGGATTCTAAAATGATGGTTTCTTTCATTTCAGCTCGGCTTTTATGATATATGGTTTGGTTCTTTAATTCTTTTTTTATGTCGTATCAGTTGTTTTTTATTTAATCCACCCGTTGAAGTTGATTTAGTGAATATATATTGCGAAGTAAGACATTATGCTGAGATAATATATTTTGGTGCTTGAGGAGTTCCAGGGATAAGTTCCGGTGTTATTCCGCTTATATATTTTAGTAAAGAGCAGGATAAGAGAGGATGTCAGCTGGTCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCGGTACGTCTCTGTGGTAGAGATGCAGTTTGCCCCAACTGCAATGGAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTTCTTTGGTCTAGATCATGATGAAGATCGCGATCATGGTCTGGGTGCATTCTCTGCTTTTATGAGACAACGTTTAGCCGAAAGAAATGACATGAGGGGAAGATCAGAGTCGCTTTTTGAGCATAGCCCGGGATTTGGTCCTTTATTAATATTTGGTGGTCAAATACCGTTGAGAAACAGCAGGTTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGTATTACACGAGGCGATAGTGGTGACTATTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACGGCTTTCAGCAAATGGTCATCGAGGCCCTCCACCAGCATCTAGATCATCAATCGACGCAATGCCCACAGTTAAGATCACACATCGACATCTTCGCTCAGATTCGCATTGTCCAGTCTGTAAAGAGAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTAATCCAGCACAATTCTTGCCCCGTCTGCCGCCAGGAACTGCCGTCACAGGGAATAGGAGGTGGGGGTGGGGGACATAGCACCAACGATCAAAACCGAAGCAACAGCTATAGCAACGGGAGTGGCTCCCGGGTCAATCCAGGTAGACGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCTAGTTCCAACTCCAACCATGGTGGAGCAGGGAGCAGTGAACCGTCGAACCACCAAATGGGGTATTCGGGATATCGATACACTAATTCACCATGAATTGAAGTTTGGAGATTGTTTGTTTGTAGTACAAAGGGTTGAAGATAAGCTTTGTTTGAAGAAGATACACAGGCTGTTGTATTTTTTGTGCAAATTTTCCTATGTAAATGACCTTATAATTAACTTGTAGTTGCTTATTGCTTCTGCTGATGTTTTCTTCATCTTCCATGTCAAAAAGATGACACATCAATTATTAGTATAAAATGGGAAAAATATTTTACTGCCTCTCGCTGAAGTGCTTTTATATATATGTATGTATAGAATTATATATATATTTTATTTATTATCAAACCAGAGAT

mRNA sequence

CGTCGCTCCTCTCTCGACCTCGTAGCCCAAAGCCTGGGTTAACCCATCCGCTCTGTCTTCTTCTTCTCTCTCTCTCTCCTCTCTCCGTTTGTTCAGTTCAAGAAAAGGGAAATTGGGTTGATCCACTTTTCTCTTTCGTCTTCCTAAAGGGATAAGTTCCGGTGTTATTCCGCTTATATATTTTAGTAAAGAGCAGGATAAGAGAGGATGTCAGCTGGTCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCGGTACGTCTCTGTGGTAGAGATGCAGTTTGCCCCAACTGCAATGGAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTTCTTTGGTCTAGATCATGATGAAGATCGCGATCATGGTCTGGGTGCATTCTCTGCTTTTATGAGACAACGTTTAGCCGAAAGAAATGACATGAGGGGAAGATCAGAGTCGCTTTTTGAGCATAGCCCGGGATTTGGTCCTTTATTAATATTTGGTGGTCAAATACCGTTGAGAAACAGCAGGTTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGTATTACACGAGGCGATAGTGGTGACTATTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACGGCTTTCAGCAAATGGTCATCGAGGCCCTCCACCAGCATCTAGATCATCAATCGACGCAATGCCCACAGTTAAGATCACACATCGACATCTTCGCTCAGATTCGCATTGTCCAGTCTGTAAAGAGAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTAATCCAGCACAATTCTTGCCCCGTCTGCCGCCAGGAACTGCCGTCACAGGGAATAGGAGGTGGGGGTGGGGGACATAGCACCAACGATCAAAACCGAAGCAACAGCTATAGCAACGGGAGTGGCTCCCGGGTCAATCCAGGTAGACGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCTAGTTCCAACTCCAACCATGGTGGAGCAGGGAGCAGTGAACCGTCGAACCACCAAATGGGGTATTCGGGATATCGATACACTAATTCACCATGAATTGAAGTTTGGAGATTGTTTGTTTGTAGTACAAAGGGTTGAAGATAAGCTTTGTTTGAAGAAGATACACAGGCTGTTGTATTTTTTGTGCAAATTTTCCTATGTAAATGACCTTATAATTAACTTGTAGTTGCTTATTGCTTCTGCTGATGTTTTCTTCATCTTCCATGTCAAAAAGATGACACATCAATTATTAGTATAAAATGGGAAAAATATTTTACTGCCTCTCGCTGAAGTGCTTTTATATATATGTATGTATAGAATTATATATATATTTTATTTATTATCAAACCAGAGAT

Coding sequence (CDS)

ATGTCAGCTGGTCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCGGTACGTCTCTGTGGTAGAGATGCAGTTTGCCCCAACTGCAATGGAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTTCTTTGGTCTAGATCATGATGAAGATCGCGATCATGGTCTGGGTGCATTCTCTGCTTTTATGAGACAACGTTTAGCCGAAAGAAATGACATGAGGGGAAGATCAGAGTCGCTTTTTGAGCATAGCCCGGGATTTGGTCCTTTATTAATATTTGGTGGTCAAATACCGTTGAGAAACAGCAGGTTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGTATTACACGAGGCGATAGTGGTGACTATTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACGGCTTTCAGCAAATGGTCATCGAGGCCCTCCACCAGCATCTAGATCATCAATCGACGCAATGCCCACAGTTAAGATCACACATCGACATCTTCGCTCAGATTCGCATTGTCCAGTCTGTAAAGAGAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTAATCCAGCACAATTCTTGCCCCGTCTGCCGCCAGGAACTGCCGTCACAGGGAATAGGAGGTGGGGGTGGGGGACATAGCACCAACGATCAAAACCGAAGCAACAGCTATAGCAACGGGAGTGGCTCCCGGGTCAATCCAGGTAGACGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCTAGTTCCAACTCCAACCATGGTGGAGCAGGGAGCAGTGAACCGTCGAACCACCAAATGGGGTATTCGGGATATCGATACACTAATTCACCATGA

Protein sequence

MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGLGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIGITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP

Homology

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BLAST of MELO3C019142.jh1 vs. NCBI nr
Match: XP_008455755.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455757.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0025786.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK09669.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 626 bits (1615), Expect = 8.58e-227
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240

Query: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299
           SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP
Sbjct: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299

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BLAST of MELO3C019142.jh1 vs. NCBI nr
Match: XP_004144313.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_004144314.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_011653845.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_031739891.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >KGN54669.1 hypothetical protein Csa_012618 [Cucumis sativus])

HSP 1 Score: 610 bits (1573), Expect = 2.18e-220
Identity = 292/299 (97.66%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSAGRNTHWCYRCRRSVRL GRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFE+LS NGHRGPPPASRSSIDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELP QGIGGGGGGHSTNDQNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGGGGGGHSTNDQNR 240

Query: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299
           SNSY+NGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYT+SP
Sbjct: 241 SNSYNNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTSSP 299

[Close]

BLAST of MELO3C019142.jh1 vs. NCBI nr
Match: XP_038882645.1 (probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882646.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882647.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882648.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882649.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882650.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida])

HSP 1 Score: 580 bits (1496), Expect = 1.55e-208
Identity = 282/307 (91.86%), Postives = 288/307 (93.81%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS GRNTHWCYRCRRSVRL GRDAVCP+CNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSTGRNTHWCYRCRRSVRLHGRDAVCPSCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRL ERNDMRGRSESLFE SPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLVERNDMRGRSESLFERSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFE+LSANGHRGPPPASRSSIDAMPTV IT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVNITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGG-------- 240
           KEKFELG EARQM CNHMYHSDCIVPWL+QHNSCPVCRQELP QGIGGGGGG        
Sbjct: 181 KEKFELGCEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQGIGGGGGGGGGGGGGG 240

Query: 241 HSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 299
           H+TN QNRSNSY NGSGSRVNPGRRNPFSYLWPFRSSSS+SNHGGAGSSEP+NHQMGYSG
Sbjct: 241 HNTNGQNRSNSY-NGSGSRVNPGRRNPFSYLWPFRSSSSSSNHGGAGSSEPTNHQMGYSG 300

[Close]

BLAST of MELO3C019142.jh1 vs. NCBI nr
Match: XP_023517925.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023517926.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550 bits (1417), Expect = 1.01e-196
Identity = 265/294 (90.14%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +GGGG  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGGG--HNTNSQNR 240

Query: 241 SNSYSN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292
           +NSY+N G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NH MGYSG
Sbjct: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHPMGYSG 292

[Close]

BLAST of MELO3C019142.jh1 vs. NCBI nr
Match: XP_022924954.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata])

HSP 1 Score: 549 bits (1414), Expect = 2.90e-196
Identity = 264/294 (89.80%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGR+ESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +GG G  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGAG--HNTNSQNR 240

Query: 241 SNSYSN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292
           +NSY+N G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.7e-88
Identity = 185/322 (57.45%), Postives = 227/322 (70.50%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MS+ RNTHWC+RC+R+VRL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRS-ESLFEHSPGFGPLLIFGGQIPLR---NSRL 120
               + AFS FMR RLAER+   ++RGR+  S  E+ PG  PLLIFGGQ+P R   ++ +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVKIT 180
           EALFN G+PGIGITRG++GDYF GPGLEELFE+LSA    RGPPPA RS+IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 HRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGI 240
            RHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWL+QHNSCPVCRQELPS   
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GGGGGGHSTNDQN-RSNSYSNGSGSRVNPG-RRNPFSYLWPFRSSSSNS----NHGGAGS 294
                  +T  +N RS+S S+ S SR N   RRNPFS  WPFRSS S+S    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.0e-77
Identity = 167/306 (54.58%), Postives = 208/306 (67.97%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+ RNTHWC+RC+R+V L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESLFEHS-PGFGPLLIFGGQIPLR-----NSR 120
              + AFSAFMR RLAER+   ++ GR  S    S     PLLIFGGQ P R     NS 
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVK 180
           +EA  NG APGIGI RG ++GDYF GPGLEEL E+LS+   HRGPPPA +SSIDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITHRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ 240
           IT +HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWL+QHNSCPVCR+ELPS+
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 GIGGGGGGHSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPS 291
                  G S++ Q+  N  +NG   R N  RRN FS LWPFRSSSS+S      ++  +
Sbjct: 241 -------GSSSSTQSSQNRSTNG---RENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33
Identity = 100/298 (33.56%), Postives = 147/298 (49.33%), Query Frame = 0


Query: 9   WCYRCRRSVRLC----GRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGL--- 68
           +CY+C R+V +       D  CP CN GF++E D+  P     F   + +    H L   
Sbjct: 24  FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83

Query: 69  --GAFSAFMRQRL-AERNDMRGRSESLFEHSP--------------GFGPLLIFGGQI-P 128
               F++ +     +  +     S S+  ++P               F P       +  
Sbjct: 84  LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143

Query: 129 LRNS--RLEALFNGAPGIGITR--GDSGDYFIGPGLEELFERLSAN--GHRGPPPASRSS 188
           LR+S  ++E +    P     R   + GDYFIGPGLE+L ++L+ N     G PPAS+S+
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203

Query: 189 IDAMPTVKITHRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPV 248
           I+A+P V IT  +L S+ + C VC + FE G+EA+QM C H+YH DC++PWL  HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263

Query: 249 CRQELPS------QGIGGGGGGHSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRS 269
           CR ELP+      + + G  G    ND + S   S+G    V    R   S  WPF++
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFR--ISLPWPFQA 319

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-33
Identity = 102/312 (32.69%), Postives = 145/312 (46.47%), Query Frame = 0


Query: 9   WCYRCRRSVRL---CGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDE---------- 68
           +CY+C ++V +      D  CP CN GF++E +D  P    +F     D           
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 69  ----------DRDHGLGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQI-PL 128
                         G+   S F           + RS      S  F P       +  L
Sbjct: 82  LLPLIFGSSAAAPSGMDFMSLF-----GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 141

Query: 129 RNS--RLEALFNGAPGIGITR--GDSGDYFIGPGLEELFERLSAN--GHRGPPPASRSSI 188
           R+S    E +    P     R  G+ GDYF GPGLE+L ++L+ N     G PPAS+S+I
Sbjct: 142 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 201

Query: 189 DAMPTVKITHRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVC 248
           DA+PTVK+T   L+S+ + C VC ++FE GS+ +QM C H++H DC++PWL  HNSCPVC
Sbjct: 202 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 261

Query: 249 RQELPSQGIGGGGGGHSTNDQNRS-NSYSNGSGSRVNPGRRNP---FSYLWPFRSSSSNS 286
           R ELP+            + +NRS  S  +G G     G++ P       WPFR    + 
Sbjct: 262 RFELPTD---------DPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQDGSG 319

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.2e-29
Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 0


Query: 7   THWCYRCRRSVRLCG-------RDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDH 66
           ++WCY C R V +             CP+C+GGFI++++D       +       E R  
Sbjct: 17  SYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDS-SSAATELTIPASTEVRSI 76

Query: 67  GLGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNS-----------R 126
                S   R+R   R              P F P+++  G    R              
Sbjct: 77  NNNRRSVIRRRRSGRR--------------PSFNPVIVLQGGAGEREEGEEGDAARDRRA 136

Query: 127 LEALFNGAPGIGI--TRGDSGDYFIGPGLEELFERLS-------ANGHRGPPPASRSSID 186
            E  ++   G G+        +  +G G E L E+LS         G  G PPAS+S+I+
Sbjct: 137 FEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIE 196

Query: 187 AMPTVKITHRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQ 225
           ++P V+I+  H+ S+++C VC E FE  +EAR+M C H++H DCIVPWL   NSCPVCR 
Sbjct: 197 SLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRF 246

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C178 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 SV=1)

HSP 1 Score: 626 bits (1615), Expect = 4.15e-227
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240

Query: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299
           SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP
Sbjct: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SIY2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00710 PE=4 SV=1)

HSP 1 Score: 626 bits (1615), Expect = 4.15e-227
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240

Query: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299
           SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP
Sbjct: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L0T9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE=4 SV=1)

HSP 1 Score: 610 bits (1573), Expect = 1.05e-220
Identity = 292/299 (97.66%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSAGRNTHWCYRCRRSVRL GRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFE+LS NGHRGPPPASRSSIDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELP QGIGGGGGGHSTNDQNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGGGGGGHSTNDQNR 240

Query: 241 SNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTNSP 299
           SNSY+NGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYT+SP
Sbjct: 241 SNSYNNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTSSP 299

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EAP6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344 PE=4 SV=1)

HSP 1 Score: 549 bits (1414), Expect = 1.41e-196
Identity = 264/294 (89.80%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGR+ESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +GG G  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGAG--HNTNSQNR 240

Query: 241 SNSYSN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292
           +NSY+N G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DKF0 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111021749 PE=4 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 6.19e-195
Identity = 269/309 (87.06%), Postives = 283/309 (91.59%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+GRNTHWCYRCRRSV L GRDAVCPNCNGGFIQELDDMVP NPFDFFGLDHDEDR  G
Sbjct: 1   MSSGRNTHWCYRCRRSVHLRGRDAVCPNCNGGFIQELDDMVPSNPFDFFGLDHDEDRGQG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSES+FE SPGFGPLLIFGGQIPLRNSRLEALF+GAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESVFERSPGFGPLLIFGGQIPLRNSRLEALFSGAPGIG 120

Query: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180
           ITRGDSGDYFIGPGLEELFE+LS NG+RGPPPASRSSIDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSVNGNRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGG----HSTN 240
           K+KFELGSEARQM CNHMYHSDCI+PWL+QHNSCPVCRQELP QGIGGGGGG    HSTN
Sbjct: 181 KDKFELGSEARQMPCNHMYHSDCIIPWLVQHNSCPVCRQELPPQGIGGGGGGAGGGHSTN 240

Query: 241 DQNRSNS-YSNGS-GSRVNPGRRNPFSYLWPFRSSSSNSNH----GGAGSSEPSNHQMGY 299
            QNRS+S Y+N S GSRVNPGRRNPFSYLWPFRSS+S SNH    GGAGSSEP NHQM Y
Sbjct: 241 GQNRSSSSYNNNSNGSRVNPGRRNPFSYLWPFRSSNSRSNHSGGGGGAGSSEPMNHQMEY 300

[Close]

BLAST of MELO3C019142.jh1 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-89
Identity = 185/322 (57.45%), Postives = 227/322 (70.50%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MS+ RNTHWC+RC+R+VRL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRS-ESLFEHSPGFGPLLIFGGQIPLR---NSRL 120
               + AFS FMR RLAER+   ++RGR+  S  E+ PG  PLLIFGGQ+P R   ++ +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVKIT 180
           EALFN G+PGIGITRG++GDYF GPGLEELFE+LSA    RGPPPA RS+IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 HRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGI 240
            RHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWL+QHNSCPVCRQELPS   
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GGGGGGHSTNDQN-RSNSYSNGSGSRVNPG-RRNPFSYLWPFRSSSSNS----NHGGAGS 294
                  +T  +N RS+S S+ S SR N   RRNPFS  WPFRSS S+S    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of MELO3C019142.jh1 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-89
Identity = 185/322 (57.45%), Postives = 227/322 (70.50%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MS+ RNTHWC+RC+R+VRL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRS-ESLFEHSPGFGPLLIFGGQIPLR---NSRL 120
               + AFS FMR RLAER+   ++RGR+  S  E+ PG  PLLIFGGQ+P R   ++ +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVKIT 180
           EALFN G+PGIGITRG++GDYF GPGLEELFE+LSA    RGPPPA RS+IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 HRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGI 240
            RHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWL+QHNSCPVCRQELPS   
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GGGGGGHSTNDQN-RSNSYSNGSGSRVNPG-RRNPFSYLWPFRSSSSNS----NHGGAGS 294
                  +T  +N RS+S S+ S SR N   RRNPFS  WPFRSS S+S    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of MELO3C019142.jh1 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-89
Identity = 185/322 (57.45%), Postives = 227/322 (70.50%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MS+ RNTHWC+RC+R+VRL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRS-ESLFEHSPGFGPLLIFGGQIPLR---NSRL 120
               + AFS FMR RLAER+   ++RGR+  S  E+ PG  PLLIFGGQ+P R   ++ +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVKIT 180
           EALFN G+PGIGITRG++GDYF GPGLEELFE+LSA    RGPPPA RS+IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 HRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGI 240
            RHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWL+QHNSCPVCRQELPS   
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GGGGGGHSTNDQN-RSNSYSNGSGSRVNPG-RRNPFSYLWPFRSSSSNS----NHGGAGS 294
                  +T  +N RS+S S+ S SR N   RRNPFS  WPFRSS S+S    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of MELO3C019142.jh1 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 7.3e-79
Identity = 167/306 (54.58%), Postives = 208/306 (67.97%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+ RNTHWC+RC+R+V L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESLFEHS-PGFGPLLIFGGQIPLR-----NSR 120
              + AFSAFMR RLAER+   ++ GR  S    S     PLLIFGGQ P R     NS 
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVK 180
           +EA  NG APGIGI RG ++GDYF GPGLEEL E+LS+   HRGPPPA +SSIDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITHRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ 240
           IT +HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWL+QHNSCPVCR+ELPS+
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 GIGGGGGGHSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPS 291
                  G S++ Q+  N  +NG   R N  RRN FS LWPFRSSSS+S      ++  +
Sbjct: 241 -------GSSSSTQSSQNRSTNG---RENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

[Close]

BLAST of MELO3C019142.jh1 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 7.3e-79
Identity = 167/306 (54.58%), Postives = 208/306 (67.97%), Query Frame = 0


Query: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+ RNTHWC+RC+R+V L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESLFEHS-PGFGPLLIFGGQIPLR-----NSR 120
              + AFSAFMR RLAER+   ++ GR  S    S     PLLIFGGQ P R     NS 
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DSGDYFIGPGLEELFERLSA-NGHRGPPPASRSSIDAMPTVK 180
           +EA  NG APGIGI RG ++GDYF GPGLEEL E+LS+   HRGPPPA +SSIDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITHRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ 240
           IT +HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWL+QHNSCPVCR+ELPS+
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 GIGGGGGGHSTNDQNRSNSYSNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPS 291
                  G S++ Q+  N  +NG   R N  RRN FS LWPFRSSSS+S      ++  +
Sbjct: 241 -------GSSSSTQSSQNRSTNG---RENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

The following BLAST results are available for this feature:

BLAST of MELO3C019142.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455755.1	8.58e-227	100.00	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1...	[more]
XP_004144313.1	2.18e-220	97.66	probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_004144314.1 pro...	[more]
XP_038882645.1	1.55e-208	91.86	probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882646.1 p...	[more]
XP_023517925.1	1.01e-196	90.14	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022924954.1	2.90e-196	89.80	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 ...	[more]

BLAST of MELO3C019142.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	1.7e-88	57.45	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	1.0e-77	54.58	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
P0CH30	1.2e-33	33.56	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	2.0e-33	32.69	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	5.2e-29	32.24	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of MELO3C019142.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C178	4.15e-227	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 ...	[more]
A0A5A7SIY2	4.15e-227	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0L0T9	1.05e-220	97.66	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE...	[more]
A0A6J1EAP6	1.41e-196	89.80	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344...	[more]
A0A6J1DKF0	6.19e-195	87.06	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102174...	[more]

BLAST of MELO3C019142.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	1.2e-89	57.45	RING-H2 finger C1A	[more]
AT2G40830.1	1.2e-89	57.45	RING-H2 finger C1A	[more]
AT2G40830.3	1.2e-89	57.45	RING-H2 finger C1A	[more]
AT3G56580.2	7.3e-79	54.58	RING/U-box superfamily protein	[more]
AT3G56580.1	7.3e-79	54.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..218 e-value: 4.3E-10 score: 39.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..218 score: 11.913911
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 6..37 e-value: 4.2E-11 score: 42.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 140..224 e-value: 2.3E-21 score: 77.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..299
None	No IPR available	PANTHER	PTHR15710:SF86	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 2..284
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 2..284
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 177..218 e-value: 6.99504E-23 score: 86.988
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 157..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019142.jh1.t1	MELO3C019142.jh1.t1	mRNA
MELO3C019142.jh1.t2	MELO3C019142.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0061630	ubiquitin protein ligase activity