MELO3C019120.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019120.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	R3H domain-containing protein 1-like isoform X1
Location	chr08: 12386397 .. 12389986 (-)
RNA-Seq Expression	MELO3C019120.jh1
Synteny	MELO3C019120.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTCTTCAGCTTCTCCCATTGATGCCTTTCCAGATGGGCTCAAAGATAAAGTCTCAGTGGTTGACCCCTTTTTGATTGAAGTCCTTCACAACCCTCGACACCGTCTAACCAGTCAGTATTTTCTTTGATTCTGATTTTGGGTTTTCATTCAGCTTCAATTTTAAGAATCTTGTTTCCTCTGATTCATTGCCCTCTTTCTTGTTAGATGACATGTTTTGGGGTTTAGATTTTTATTTTGATTTTTATGAACTTCCAAGTGTGGTTTGTAATTGTGAATCTGTTATTGTATTGGTTTAATTCTGAACAAAGGGGTTGTAGCTTTTTTCTCAACTTTGATGCCACTCACTTAGGTGTTGTCTTAGCTTTAATGGGCATTTGCTAGTTTTAATTCAGATCAAGTAAGTTTTTGCCTCCATGAAACTAGAATGAGAGCCATGTTTGGTAACTATTTAGTTTTTAGTTTTCGGTTTTTGAAAATTAAGCCTATAAATACTCATCCAACCTATAAATTCCTTATTAAAAACCATGCCAAATTTTGAAAACTAAAAGAAGTAGTATTTAAAAACTTGTTTTTGTTTTCCGAATTCAACTCCTTTCAAAATTTGGTATGGTTTTTAAAGCATTCGTAAAAGAGTAACCTAAGAGTTCAACTCTTTTAAGAAATTGAAAGGAAATAAGTTAATTTTCATAAATCAAGAACACCACATGGTTACCAAGCGAGGTTTAAGTTTCTTTTTGTTAATATTATTCATTTTTTCAATTTACTCTGCTCATTGTAGTTCAATTTTTACAATAGTTCTGCGGATGGAACTTGATATTCAAAGGTTCTTGCAAAACCAAGAGCAGCAGGTGTTTGAGTTCCAACACTTTCCTACTTCATACCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTATGGTCTGCAGACAATGGTCCAGGATAATGGTATAGATGGACAAGGGAGAATTTTGGTGAAGAAAACTGTTGAAGCTAGATTCCCAACCATTTGCTTATCTCAAATACCTGCAAAACAATTGGCTGATGATAAACCTGGGCATGTTAAAATTGCTGTTAGGCCGAAGCCGAATAAGTTGTCTGATGATGCTGGTAATTGTATGGCTAAGCAAAGTCATGGTAGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCAGCAGCCAAAGTAGTGGTTCAGTGGATGTATTGTCCCATACTGTCACCGAGGGGCTTGGTATACCTCCAAACAGAGATAGGGCGGAAGATTGTAGAGTGAACGATGTTGAGAAGTATATGAGTGGTACAGATGCTGGGAATGGGGCTTCTTCTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGTGACCCAGATTATGATCGGAGTTATGAAAGGTAATGCCTCCTTTGAACCAGACTACACCTATGCTGCTAGCTGATAGTGCCATTATTACATATGCTATTGTTGGTTTCTCCCAATATGATGAGACCATTTTAGCTGATAGTTCTTCAAACCTCCATTTTCATCGAACTTATTACATTCATTATGCTATGTATTATCTGAATGGTTGGGTATCTACATGCAAATTAATCAGAAATTTGTTCTTCATTTGTAGGTATGTTAAGAGCCTTCCAATTAATCTTACTCCGAGCTTGAATTTTCCTCCTTTCACCTTTCAAAACATCATGCCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTCCACTGGGCTATGTTTCTCCTTCACAAATCAAAACTGTAGGATTGAATCAGATGTCTAGACCCTCAGCCAATGTGCCGTGGCCATGTGCAGGGATGCCATACCCACATTCTGCTTTCCAGGTACGTTTACGATCTTTACAGTACACAGCCTCTGTTCTATCACTTGAATTGATTTGGTAAAACTGAAAAGTTATATCACACAACCCAGGTTCTTACTAGTGTTTACAAAATTCACTTGGATTGATCTTGGTTAATCTAGAAACAATATGGAGAAGCTACAAAATTAATTAGGCAAAGTCGTAAAGAACACCGAAAGGTTGAACCTTAGCTAGGTCAATCATTTCTGCCTCTGTATGAATGTCGTTTTCGTTGATTGTGCTGGAGCTTGTTCAATGAAAATGCTATGTAAAACTGCTTTTGCTACATTTATCCAAAGATCTCCCCCTTCTTGGAATTTGACCGTAAAACAGTTGGATGATGTTCTCCCTTTGCTTTTTTACCCCAAAGGTTAGGACACTTGGAACTTATTCCTTCTCACCAATCTTATTATAACAGCGATGGAGTAACAGACGATAGGTTTTTCTCTTGCCCCACGACATAAAATGCACCTATTTGATCGAAAAGATGAATCCGGTACACTGATGAATTCATTGTTCCAAATATCATTTTAGAAAATAACCCTTCCAAACACAAAATACCTGTCTGAAAGCCTATCTTCCAACTGTCTTTATCTTTTTCACAGTTGATTCAATAGTGTTACTGTCTTCTACCCGCTTGCGTACTTTATTTCTTTAGTAGAGATGCATCAACTGTTTTATTCTCTTCTAACTTAAGCCTATCTTCCAACTGTCTTTATCTTTGTGTTGACTTCCTTTTGGTGTTATTGCAGGCTCCATTGTATCAACAGTCTTTGAGTTTTGATTATTTGCAATACAATTGAATACGGCAGTTAGGAGATAGTAGTAATTAAAAACTGATTTACTCGGCTAATTATATACTCATTTTGTTAGTTCCAAAACCTCCCATTATAATCAATTGTTTTAAACTAAACTCTTTAATTTATACTTTCTATCATTTCTAATATTCATTATTGAGTGTCTTTCTGGGCATCGTGTTGATTCTAAATTTCAGATTTTCTTTTTTAAATGGACCAATAAAAGAGATCTTTTTTTTTTTTCCGAGAGCATTCCATTTTAATTTTAAACTATGTATAAATAATTATATGGCTTTGTCGTTTGATAAAAATAAAATAATTCAACTGAAATCTAATATAGACAAACATCTTTTGTTTTGACGTTCCTTTGCAAAGTATATTATATGCTGTTGGATTAGATTCTTGTGAATGATAAATGTAAAAATCTTAGTAATAGAAGGTTGAAAAAACTTATCACTTCAATTTTATTAAAAGTAGCATTTGCTTCTAGGAGAATCTAAAACTTCCTAACAAGTTAATTTTAGAAGGGGATTGAATGGATCCATGATTTAGTATTGATTATAGTAGATTTAATAGACACTTTCATTTTGCACCTCCTTCCTAGATATATGTCTATTAGGCAGTAACCAAAATTTGAAGACCATAAGAAAAAAAAAAAAGGAGTAAATAAATAAATAGGAACCAAAGTTTTGCATTTTATTTTTCTATTTTCTGAGATCTAATTGCCTAATGTAGCAAACTCATTAGATGAAGCGTTTATAAGTCAAGTTATTTCTCTCCTGTCTTAACTAAATTTGTTAATTTCAGATTGATTGAGCAAAATTCAATCCTTTTAGTTTATGGATTGCTTATAAATATTTTGTTTACATGATTTTAGAAGTCTCGATTTAGCTTATAGTTGGGC

mRNA sequence

ATGGATTCCTCTTCAGCTTCTCCCATTGATGCCTTTCCAGATGGGCTCAAAGATAAAGTCTCAGTGGTTGACCCCTTTTTGATTGAAGTCCTTCACAACCCTCGACACCGTCTAACCAGTCATTCAATTTTTACAATAGTTCTGCGGATGGAACTTGATATTCAAAGGTTCTTGCAAAACCAAGAGCAGCAGGTGTTTGAGTTCCAACACTTTCCTACTTCATACCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTATGGTCTGCAGACAATGGTCCAGGATAATGGTATAGATGGACAAGGGAGAATTTTGGTGAAGAAAACTGTTGAAGCTAGATTCCCAACCATTTGCTTATCTCAAATACCTGCAAAACAATTGGCTGATGATAAACCTGGGCATGTTAAAATTGCTGTTAGGCCGAAGCCGAATAAGTTGTCTGATGATGCTGGTAATTGTATGGCTAAGCAAAGTCATGGTAGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCAGCAGCCAAAGTAGTGGTTCAGTGGATGTATTGTCCCATACTGTCACCGAGGGGCTTGGTATACCTCCAAACAGAGATAGGGCGGAAGATTGTAGAGTGAACGATGTTGAGAAGTATATGAGTGGTACAGATGCTGGGAATGGGGCTTCTTCTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGTGACCCAGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTTACTCCGAGCTTGAATTTTCCTCCTTTCACCTTTCAAAACATCATGCCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTCCACTGGGCTATGTTTCTCCTTCACAAATCAAAACTGTAGGATTGAATCAGATGTCTAGACCCTCAGCCAATGTGCCGTGGCCATGTGCAGGGATGCCATACCCACATTCTGCTTTCCAGGCTCCATTGTATCAACAGTCTTTGAGTTTTGATTATTTGCAATACAATTGAATACGGCAGTTAGGAGATAGTAGTAATTAAAAACTGATTTACTCGGCTAATTATATACTCATTTTGTTAGTTCCAAAACCTCCCATTATAATCAATTGTTTTAAACTAAACTCTTTAATTTATACTTTCTATCATTTCTAATATTCATTATTGAGTGTCTTTCTGGGCATCGTGTTGATTCTAAATTTCAGATTTTCTTTTTTAAATGGACCAATAAAAGAGATCTTTTTTTTTTTTCCGAGAGCATTCCATTTTAATTTTAAACTATGTATAAATAATTATATGGCTTTGTCGTTTGATAAAAATAAAATAATTCAACTGAAATCTAATATAGACAAACATCTTTTGTTTTGACGTTCCTTTGCAAAGTATATTATATGCTGTTGGATTAGATTCTTGTGAATGATAAATGTAAAAATCTTAGTAATAGAAGGTTGAAAAAACTTATCACTTCAATTTTATTAAAAGTAGCATTTGCTTCTAGGAGAATCTAAAACTTCCTAACAAGTTAATTTTAGAAGGGGATTGAATGGATCCATGATTTAGTATTGATTATAGTAGATTTAATAGACACTTTCATTTTGCACCTCCTTCCTAGATATATGTCTATTAGGCAGTAACCAAAATTTGAAGACCATAAGAAAAAAAAAAAAGGAGTAAATAAATAAATAGGAACCAAAGTTTTGCATTTTATTTTTCTATTTTCTGAGATCTAATTGCCTAATGTAGCAAACTCATTAGATGAAGCGTTTATAAGTCAAGTTATTTCTCTCCTGTCTTAACTAAATTTGTTAATTTCAGATTGATTGAGCAAAATTCAATCCTTTTAGTTTATGGATTGCTTATAAATATTTTGTTTACATGATTTTAGAAGTCTCGATTTAGCTTATAGTTGGGC

Coding sequence (CDS)

ATGGATTCCTCTTCAGCTTCTCCCATTGATGCCTTTCCAGATGGGCTCAAAGATAAAGTCTCAGTGGTTGACCCCTTTTTGATTGAAGTCCTTCACAACCCTCGACACCGTCTAACCAGTCATTCAATTTTTACAATAGTTCTGCGGATGGAACTTGATATTCAAAGGTTCTTGCAAAACCAAGAGCAGCAGGTGTTTGAGTTCCAACACTTTCCTACTTCATACCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTATGGTCTGCAGACAATGGTCCAGGATAATGGTATAGATGGACAAGGGAGAATTTTGGTGAAGAAAACTGTTGAAGCTAGATTCCCAACCATTTGCTTATCTCAAATACCTGCAAAACAATTGGCTGATGATAAACCTGGGCATGTTAAAATTGCTGTTAGGCCGAAGCCGAATAAGTTGTCTGATGATGCTGGTAATTGTATGGCTAAGCAAAGTCATGGTAGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCAGCAGCCAAAGTAGTGGTTCAGTGGATGTATTGTCCCATACTGTCACCGAGGGGCTTGGTATACCTCCAAACAGAGATAGGGCGGAAGATTGTAGAGTGAACGATGTTGAGAAGTATATGAGTGGTACAGATGCTGGGAATGGGGCTTCTTCTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGTGACCCAGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTTACTCCGAGCTTGAATTTTCCTCCTTTCACCTTTCAAAACATCATGCCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTCCACTGGGCTATGTTTCTCCTTCACAAATCAAAACTGTAGGATTGAATCAGATGTCTAGACCCTCAGCCAATGTGCCGTGGCCATGTGCAGGGATGCCATACCCACATTCTGCTTTCCAGGCTCCATTGTATCAACAGTCTTTGAGTTTTGATTATTTGCAATACAATTGA

Protein sequence

MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIKTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN

Homology

[Close]

BLAST of MELO3C019120.jh1 vs. NCBI nr
Match: XP_008455743.1 (PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo] >KAA0025856.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 671 bits (1731), Expect = 4.94e-243
Identity = 335/345 (97.10%), Postives = 337/345 (97.68%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240
           QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD
Sbjct: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240

Query: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300
           LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK
Sbjct: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300

Query: 301 TVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           TVGLNQMSR SANVPWPCAGMPYPHSAFQAPLYQQSLSFDY+QYN
Sbjct: 301 TVGLNQMSRSSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYMQYN 338

[Close]

BLAST of MELO3C019120.jh1 vs. NCBI nr
Match: TYK22607.1 (R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 640 bits (1651), Expect = 5.32e-230
Identity = 320/329 (97.26%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240
           QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD
Sbjct: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240

Query: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300
           LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK
Sbjct: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300

Query: 301 TVGLNQMSRPSANVPWPCAGMPYPHSAFQ 329
           TVGLNQMSR SANVPWPCAGMPYPHSAFQ
Sbjct: 301 TVGLNQMSRSSANVPWPCAGMPYPHSAFQ 322

[Close]

BLAST of MELO3C019120.jh1 vs. NCBI nr
Match: XP_011653850.1 (uncharacterized protein LOC101216736 [Cucumis sativus])

HSP 1 Score: 619 bits (1597), Expect = 1.36e-222
Identity = 311/346 (89.88%), Postives = 320/346 (92.49%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSS S IDA PDGLKDKVS VDPFLIE LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           Q+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIA+RP+PNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QSS-GSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240
           Q S G V+VL HTV EGLGIPPNRDR EDCRVNDVEKY S TDAGNGASSRVAILRDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300
           DLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI PSFTGYHVPRNEV LGYVSPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           KTVGLNQ+SRPSANVPWPCAGMPYPH+AFQAPLYQQSLSFDYLQYN
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN 339

[Close]

BLAST of MELO3C019120.jh1 vs. NCBI nr
Match: XP_008455744.1 (PREDICTED: R3H domain-containing protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 596 bits (1537), Expect = 3.81e-214
Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 50  MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT 109
           MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT
Sbjct: 1   MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT 60

Query: 110 VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE 169
           VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE
Sbjct: 61  VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE 120

Query: 170 YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS 229
           YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS
Sbjct: 121 YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS 180

Query: 230 RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV 289
           RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV
Sbjct: 181 RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV 240

Query: 290 PLGYVSPSQIKTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           PLGYVSPSQIKTVGLNQMSR SANVPWPCAGMPYPHSAFQAPLYQQSLSFDY+QYN
Sbjct: 241 PLGYVSPSQIKTVGLNQMSRSSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYMQYN 296

[Close]

BLAST of MELO3C019120.jh1 vs. NCBI nr
Match: KGN54887.2 (hypothetical protein Csa_012257 [Cucumis sativus])

HSP 1 Score: 588 bits (1517), Expect = 2.43e-210
Identity = 296/333 (88.89%), Postives = 305/333 (91.59%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSS S IDA PDGLKDKVS VDPFLIE LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           Q+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIA+RP+PNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QSS-GSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240
           Q S G V+VL HTV EGLGIPPNRDR EDCRVNDVEKY S TDAGNGASSRVAILRDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300
           DLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI PSFTGYHVPRNEV LGYVSPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPL 332
           KTVGLNQ+SRPSANVPWPCAGMPYPH+AFQ  L
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQVHL 326

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 26  FLIEVL-HNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVA 85
           FL+  L +NPR R+       ++L++E +I  F+ N E    +F    TSY R+  HRVA
Sbjct: 156 FLVNTLKNNPRDRM-------MLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVA 215

Query: 86  QHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQLADDK-PGHVKIAVRPK 145
            ++GL     D+ +D  G+ ++V KT   R P     Q   + + DDK     K  +  +
Sbjct: 216 AYFGL-----DHNVDQSGKSVIVNKTSNTRIP----DQKFNEHIKDDKGEDFQKRYILKR 275

Query: 146 PNKLSDDAGNCM----AKQSHGRTVEQRKEEYDKARARIFSSQS 183
            N   D   N M          +++E+R+EEY +AR RIFS  S
Sbjct: 276 DNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDS 302

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SJ76 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001300 PE=4 SV=1)

HSP 1 Score: 671 bits (1731), Expect = 2.39e-243
Identity = 335/345 (97.10%), Postives = 337/345 (97.68%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240
           QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD
Sbjct: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240

Query: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300
           LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK
Sbjct: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300

Query: 301 TVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           TVGLNQMSR SANVPWPCAGMPYPHSAFQAPLYQQSLSFDY+QYN
Sbjct: 301 TVGLNQMSRSSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYMQYN 338

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C2A6 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495843 PE=4 SV=1)

HSP 1 Score: 671 bits (1731), Expect = 2.39e-243
Identity = 335/345 (97.10%), Postives = 337/345 (97.68%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240
           QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD
Sbjct: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240

Query: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300
           LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK
Sbjct: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300

Query: 301 TVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           TVGLNQMSR SANVPWPCAGMPYPHSAFQAPLYQQSLSFDY+QYN
Sbjct: 301 TVGLNQMSRSSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYMQYN 338

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DFX8 (R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00310 PE=4 SV=1)

HSP 1 Score: 640 bits (1651), Expect = 2.58e-230
Identity = 320/329 (97.26%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180

Query: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240
           QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD
Sbjct: 181 QSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKD 240

Query: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300
           LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK
Sbjct: 241 LSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQIK 300

Query: 301 TVGLNQMSRPSANVPWPCAGMPYPHSAFQ 329
           TVGLNQMSR SANVPWPCAGMPYPHSAFQ
Sbjct: 301 TVGLNQMSRSSANVPWPCAGMPYPHSAFQ 322

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L247 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420720 PE=4 SV=1)

HSP 1 Score: 619 bits (1597), Expect = 6.57e-223
Identity = 311/346 (89.88%), Postives = 320/346 (92.49%), Query Frame = 0


Query: 1   MDSSSASPIDAFPDGLKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQN 60
           MDSSS S IDA PDGLKDKVS VDPFLIE LHNPRHRLT       +LRMELDIQRFLQN
Sbjct: 1   MDSSSPSSIDALPDGLKDKVSTVDPFLIEALHNPRHRLT-------ILRMELDIQRFLQN 60

Query: 61  QEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120
           Q+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS
Sbjct: 61  QDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLS 120

Query: 121 QIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS 180
           QIPAKQLADDKPGHVKIA+RP+PNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIFSS
Sbjct: 121 QIPAKQLADDKPGHVKIAIRPRPNKLSDEAGNCMAKQSHARTVEQRKEEYDKARARIFSS 180

Query: 181 QSS-GSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREK 240
           Q S G V+VL HTV EGLGIPPNRDR EDCRVNDVEKY S TDAGNGASSRVAILRDREK
Sbjct: 181 QGSIGPVEVLPHTVIEGLGIPPNRDRVEDCRVNDVEKYTSVTDAGNGASSRVAILRDREK 240

Query: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 300
           DLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI PSFTGYHVPRNEV LGYVSPS I
Sbjct: 241 DLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNITPSFTGYHVPRNEVSLGYVSPSPI 300

Query: 301 KTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           KTVGLNQ+SRPSANVPWPCAGMPYPH+AFQAPLYQQSLSFDYLQYN
Sbjct: 301 KTVGLNQVSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN 339

[Close]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C2V3 (R3H domain-containing protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495843 PE=4 SV=1)

HSP 1 Score: 596 bits (1537), Expect = 1.85e-214
Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 50  MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT 109
           MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT
Sbjct: 1   MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKT 60

Query: 110 VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE 169
           VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE
Sbjct: 61  VEARFPTICLSQIPAKQLADDKPGHVKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEE 120

Query: 170 YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS 229
           YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS
Sbjct: 121 YDKARARIFSSQSSGSVDVLSHTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASS 180

Query: 230 RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV 289
           RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV
Sbjct: 181 RVAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEV 240

Query: 290 PLGYVSPSQIKTVGLNQMSRPSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYLQYN 345
           PLGYVSPSQIKTVGLNQMSR SANVPWPCAGMPYPHSAFQAPLYQQSLSFDY+QYN
Sbjct: 241 PLGYVSPSQIKTVGLNQMSRSSANVPWPCAGMPYPHSAFQAPLYQQSLSFDYMQYN 296

[Close]

BLAST of MELO3C019120.jh1 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-66
Identity = 159/338 (47.04%), Postives = 203/338 (60.06%), Query Frame = 0


Query: 23  VDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHR 82
           VDPFL+E LHN RHRLT       +LRMELD+QR LQN EQQ FEFQHFPTSYLRLAAHR
Sbjct: 24  VDPFLVEALHNSRHRLT-------ILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHR 83

Query: 83  VAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQIP-AKQLADDKPGHVKIAVR 142
           VA HYGL T VQ++G DG + RILV KT E++FP + LS+IP AKQ  + K    K++++
Sbjct: 84  VANHYGLATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIK 143

Query: 143 PKPNKLSD-DAGNCMAKQSHGRTVEQRKEEYDKARARIFSSQSSGSV-DVLSHTVTEGLG 202
            +P+K S   AG+    +   R+VE+RKEEYDKAR RIFS  +  S  D  S T      
Sbjct: 144 TRPSKGSGYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQVYERN 203

Query: 203 IPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKDLSDPDYDRSYERYVKSLP 262
              +RD  +  +   VE   + +   +G +SRVAI RDREKD  DPDYDR ++RY++SLP
Sbjct: 204 ASLSRDDKQVSKNAYVEVKKNLSIRESGPTSRVAIFRDREKDRFDPDYDRRHQRYIRSLP 263

Query: 263 INLTPSLNFPPFTFQNIMP-----SFTGYH-VPRNEVPLGYVSPSQIKTVGLNQMSRPSA 322
           +N   + N PPF  Q I        FTGY+ +P    PLG+  P     +     +  + 
Sbjct: 264 VN--QNFNLPPFNIQQIPTPYYEMGFTGYNQIPSPPAPLGF-GPHPSSIMSPYGTTMDAM 323

Query: 323 NVPWPCAGMPYPH-------SAFQAPLYQQSLSFDYLQ 344
            + WP A M Y H        + QA   QQ LSFDY+Q
Sbjct: 324 YMHWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSFDYMQ 351

[Close]

BLAST of MELO3C019120.jh1 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-61
Identity = 155/346 (44.80%), Postives = 203/346 (58.67%), Query Frame = 0


Query: 16  LKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSY 75
           + DK   VDPFL+E L NPRHRLT       +LRMELD+QRFLQ+ +QQ FEFQHFPTSY
Sbjct: 14  IADKGFNVDPFLVEALQNPRHRLT-------ILRMELDVQRFLQSPDQQQFEFQHFPTSY 73

Query: 76  LRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQIPAKQLADDKPGH 135
           LR AAHRVA HYGL T V+D G DG + RI+V K+ ++RFP   LS+IP KQ    K  H
Sbjct: 74  LRFAAHRVANHYGLITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEH 133

Query: 136 VKIAVRPKPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFSS-QSSGSVDVLSHTV 195
           +K+ ++P+P K S   G+ + K    ++VE+RKE+YD+ARARIF+   +    D  S T 
Sbjct: 134 MKVVIKPRPTKGSGMEGDEL-KGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETN 193

Query: 196 TEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKDLSDPDYDRSYERY 255
              +    +RD  +  +  ++E   +     +  +SR+AILRDREKD  DPDYDRS  RY
Sbjct: 194 PWRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRY 253

Query: 256 VKSLPINLTPSLNFPPFTFQNIMP-----SFTGYH-VPRNEVPLGYVS-PSQIKTVGLNQ 315
           + +LP++   +L    F  Q +        F GY       + LG  S  S   T GLNQ
Sbjct: 254 ISNLPVD--QNLCVAHFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLNQ 313

Query: 316 MSRPSA-NVPWP-CAGMPYPH-------SAFQAPLYQQSLSFDYLQ 344
            SR +A  + WP  A + Y H       S FQA  Y Q LSFDY+Q
Sbjct: 314 PSRDAAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSFDYMQ 349

[Close]

BLAST of MELO3C019120.jh1 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-59
Identity = 145/315 (46.03%), Postives = 185/315 (58.73%), Query Frame = 0


Query: 16  LKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSY 75
           + +K ++VDPFL+E L NPRHRLT       +LRMELDIQ+F QN EQ  FEF  FPTSY
Sbjct: 4   MTEKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQNPEQLQFEFPPFPTSY 63

Query: 76  LRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTICLSQIPAKQLADDK 135
           LRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP +CLS+IP KQ  + +
Sbjct: 64  LRLAAHRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGR 123

Query: 136 PGHVKIAVRPKPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFSSQSSGSVDVLS 195
           P   KIA++P+P + S   G+    +Q+  R+VE+RKEEYDKARARIF+S SS   +  S
Sbjct: 124 PEGFKIAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 183

Query: 196 HTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKDLSDPDYDRSY 255
                 L +        +  V      +      +G +SRVAI+RDREKD  DPDYDRSY
Sbjct: 184 SLRPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSY 243

Query: 256 ERYVKSLPINLTPSLNFPPFTFQNIMPSFTGY--HVPR-NEVPLGYVSPSQIKTVGLNQM 315
           +RYV+ +P       +F P      +P   G+  H+PR ++  L Y  P       LN  
Sbjct: 244 DRYVRVMP----SGQSFSPMPIH--IPFHDGFFPHMPRGHQANLNYGHP-------LNPA 298

Query: 316 SRP-----SANVPWP 318
             P     ++  PWP
Sbjct: 304 LSPFTHNVASYTPWP 298

[Close]

BLAST of MELO3C019120.jh1 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-58
Identity = 146/319 (45.77%), Postives = 186/319 (58.31%), Query Frame = 0


Query: 16  LKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSY 75
           + +K ++VDPFL+E L NPRHRLT       +LRMELDIQ+F QN EQ  FEF  FPTSY
Sbjct: 4   MTEKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQNPEQLQFEFPPFPTSY 63

Query: 76  LRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTICLSQIPAKQLADDK 135
           LRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP +CLS+IP KQ  + +
Sbjct: 64  LRLAAHRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGR 123

Query: 136 PGHVKIAVRPKPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFSSQSSGSVDVLS 195
           P   KIA++P+P + S   G+    +Q+  R+VE+RKEEYDKARARIF+S SS   +  S
Sbjct: 124 PEGFKIAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 183

Query: 196 HTVTEGLGIPPNRDRAEDCRVNDVEKYMSGTDAGNGASSRVAILRDREKDLSDPDYDRSY 255
                 L +        +  V      +      +G +SRVAI+RDREKD  DPDYDRSY
Sbjct: 184 SLRPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSY 243

Query: 256 ERYVKSLP---INLTPS-LNFPPFTFQNIMPSFTGY--HVPR-NEVPLGYVSPSQIKTVG 315
           +RYV       + + PS  +F P      +P   G+  H+PR ++  L Y  P       
Sbjct: 244 DRYVVDPAYRYVRVMPSGQSFSPMPIH--IPFHDGFFPHMPRGHQANLNYGHP------- 303

Query: 316 LNQMSRP-----SANVPWP 318
           LN    P     ++  PWP
Sbjct: 304 LNPALSPFTHNVASYTPWP 306

[Close]

BLAST of MELO3C019120.jh1 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-56
Identity = 142/324 (43.83%), Postives = 186/324 (57.41%), Query Frame = 0


Query: 16  LKDKVSVVDPFLIEVLHNPRHRLTSHSIFTIVLRMELDIQRFLQNQEQQVFEFQHFPTSY 75
           + DK ++VDPFL+E L NPRHRLT       +LRMELDIQ+F Q+ EQQ +EFQ  PTSY
Sbjct: 4   MSDKEAMVDPFLVEALQNPRHRLT-------ILRMELDIQKFFQSPEQQQYEFQPLPTSY 63

Query: 76  LRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVKKTVEARFPTICLSQIPAKQ-LADDKP 135
           LRL AHRVAQHYGL  T ++  G+DG G RIL  KTVE+R+P +CLS+IP KQ     +P
Sbjct: 64  LRLIAHRVAQHYGLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRP 123

Query: 136 GHVKIAVRPKPNKLSDDAGNCMAKQSH-GRTVEQRKEEYDKARARIFSSQSSGSVDVLSH 195
              KIA++P+PN+ +  +G+    + +  R+VE+RKEEYDKARARIF+S SS   +  S 
Sbjct: 124 EGFKIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST 183

Query: 196 TV---------TEGLGIPPNRDRAE---DCRVNDVEKYMSGTDAGNGASSRVAILRDREK 255
                      ++     P+R+  E   +   N V+   +G    +G +SRVAI+RDREK
Sbjct: 184 RAPPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREK 243

Query: 256 DLSDPDYDRSYERYVKSLPINLTPSLNFPPFTFQNIMPSFTGYHVPRNEVPLGYVSPSQI 315
           D  DPDYDR+  RYV+  P    P  NF P              +PR +  L Y  P   
Sbjct: 244 DRYDPDYDRN--RYVRVAP----PVQNFNPIPIPLPFHDAIFPQMPRTQASLNYGHP--- 303

Query: 316 KTVGLNQMSRPSANVPWPCAGMPY 324
               LN      +   WP A M Y
Sbjct: 304 ----LNPAMTAPSYTEWPSATMTY 307

The following BLAST results are available for this feature:

BLAST of MELO3C019120.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455743.1	4.94e-243	97.10	PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo] >KAA00...	[more]
TYK22607.1	5.32e-230	97.26	R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011653850.1	1.36e-222	89.88	uncharacterized protein LOC101216736 [Cucumis sativus]	[more]
XP_008455744.1	3.81e-214	99.32	PREDICTED: R3H domain-containing protein 1-like isoform X2 [Cucumis melo]	[more]
KGN54887.2	2.43e-210	88.89	hypothetical protein Csa_012257 [Cucumis sativus]	[more]

BLAST of MELO3C019120.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q15032	1.3e-07	32.32	R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3	[more]

BLAST of MELO3C019120.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJ76	2.39e-243	97.10	R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C2A6	2.39e-243	97.10	R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DFX8	2.58e-230	97.26	R3H domain-containing protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0L247	6.57e-223	89.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420720 PE=4 SV=1	[more]
A0A1S3C2V3	1.85e-214	99.32	R3H domain-containing protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MELO3C019120.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56680.1	1.3e-66	47.04	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	1.2e-61	44.80	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.2	1.9e-59	46.03	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.1	2.8e-58	45.77	Single-stranded nucleic acid binding R3H protein	[more]
AT5G05100.1	1.5e-56	43.83	Single-stranded nucleic acid binding R3H protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 21..102 e-value: 5.1E-12 score: 55.9
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 39..90 e-value: 1.4E-14 score: 53.8
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 37..101 score: 10.433622
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 127..174 e-value: 2.7E-9 score: 37.6
IPR024771	SUZ domain	PROSITE	PS51673	SUZ	coord: 106..175 score: 10.670383
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 16..133 e-value: 3.5E-28 score: 99.8
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 12..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..158
None	No IPR available	PANTHER	PTHR15672:SF15	OS05G0411600 PROTEIN	coord: 10..337
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 10..337
None	No IPR available	CDD	cd02642	R3H_encore_like	coord: 36..102 e-value: 1.72221E-18 score: 76.4873

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019120.jh1.t1	MELO3C019120.jh1.t1	mRNA
MELO3C019120.jh1.t2	MELO3C019120.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding