MELO3C019081 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019081
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 11530293 .. 11530472 (+)
RNA-Seq Expression	MELO3C019081
Synteny	MELO3C019081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

mRNA sequence

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

Coding sequence (CDS)

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

Protein sequence

MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ

Homology

[Close]

BLAST of MELO3C019081 vs. NCBI nr
Match: TYK26887.1 (hypothetical protein E5676_scaffold7319G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081 vs. NCBI nr
Match: KAA0025966.1 (hypothetical protein E6C27_scaffold34G002810 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081 vs. ExPASy TrEMBL
Match: A0A5D3DSZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00010 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081 vs. ExPASy TrEMBL
Match: A0A5A7SJI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002810 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

The following BLAST results are available for this feature:

BLAST of MELO3C019081 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26887.1	3.7e-24	100.00	hypothetical protein E5676_scaffold7319G00010 [Cucumis melo var. makuwa]	[more]
KAA0025966.1	3.7e-24	100.00	hypothetical protein E6C27_scaffold34G002810 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C019081 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSZ1	1.8e-24	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SJI4	1.8e-24	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C019081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019081.1	MELO3C019081.1	mRNA