MELO3C019042.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019042.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon protein
Locationchr08: 10061875 .. 10062437 (+)
RNA-Seq ExpressionMELO3C019042.jh1
SyntenyMELO3C019042.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGGTATTAATTTCATAATGCAATTATACATATTTTTTATAATCACAATCATCAACTAATCTCCCTAAGTTACATTTGTACAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

mRNA sequence

ATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

Coding sequence (CDS)

ATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

Protein sequence

MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
Homology
[Close]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (795), Expect = 3.13e-104
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (612), Expect = 1.88e-73
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 29  HAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGK 88
           H   EMRGPSCSGFGWNEEFQCII ERDLFDSWVKSHPATKGLLHKSFPYYDDL+YVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 89  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 144
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 2.81e-69
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MM +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCII ERDLFD+
Sbjct: 222 MMVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDN 281

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WVKSHP  +GLLHKSFPYYDDL+YVF KDRAT AR ETF DVGSNV NMFND +PLGDS+
Sbjct: 282 WVKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSY 341

Query: 121 DEDIPTMYSQGVHISPD 137
           D+DIP MYSQGVHISPD
Sbjct: 342 DQDIPAMYSQGVHISPD 358

[Close]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 2.32e-66
Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+ E++LFD+
Sbjct: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDN 60

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+K FPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD +
Sbjct: 61  WVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 120

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
            ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 121 -EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 159

[Close]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (542), Expect = 7.46e-66
Identity = 102/160 (63.75%), Postives = 126/160 (78.75%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CII E++LFD+
Sbjct: 51  MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDN 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+K FPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD +
Sbjct: 111 WVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
            ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 171 -EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 1.51e-104
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 1.51e-104
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1)

HSP 1 Score: 240 bits (612), Expect = 9.12e-74
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 29  HAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGK 88
           H   EMRGPSCSGFGWNEEFQCII ERDLFDSWVKSHPATKGLLHKSFPYYDDL+YVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 89  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 144
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1)

HSP 1 Score: 223 bits (569), Expect = 1.36e-69
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MM +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCII ERDLFD+
Sbjct: 222 MMVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDN 281

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WVKSHP  +GLLHKSFPYYDDL+YVF KDRAT AR ETF DVGSNV NMFND +PLGDS+
Sbjct: 282 WVKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSY 341

Query: 121 DEDIPTMYSQGVHISPD 137
           D+DIP MYSQGVHISPD
Sbjct: 342 DQDIPAMYSQGVHISPD 358

[Close]
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CHA0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00970 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.13e-66
Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 0 

Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+ E++LFD+
Sbjct: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDN 60

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+K FPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD +
Sbjct: 61  WVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 120

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
            ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 121 -EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 159

[Close]
BLAST of MELO3C019042.jh1 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 32/125 (25.60%), Postives = 59/125 (47.20%), Query Frame = 0 

Query: 20  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYY 79
           R+K LK  Y +  +++  S SGFGW+   +      +++  ++K+HP  K L + +F ++
Sbjct: 73  RMKYLKIQYQSCLDLQRFS-SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFF 132

Query: 80  DDLTYVFGKDRATGARSETFVD--------VGSNVPNMFNDTIPLGDSHDEDIPTMYSQG 137
           D+L  +FG+  ATG  +    D         G N    + D     + ++ D  T +   
Sbjct: 133 DELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVD--DFDNVYEYDTTTHHESS 192

[Close]
BLAST of MELO3C019042.jh1 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 8.9e-07
Identity = 20/74 (27.03%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 20  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYY 79
           R K L++ Y+ I  +     +GF W+     +I + D++++++++HP  +    K+ P Y
Sbjct: 381 RYKHLRRLYNDIKFLL--EQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSY 440

Query: 80  DDLTYVFGKDRATG 94
            +L ++FGK+ + G
Sbjct: 441 PNLCFIFGKETSDG 452

[Close]
BLAST of MELO3C019042.jh1 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 18/65 (27.69%), Postives = 35/65 (53.85%), Query Frame = 0 

Query: 41  GFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFV 100
           GF W++  Q ++ +  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESI 147

Query: 101 DVGSN 106
             G +
Sbjct: 148 SEGES 151

[Close]
BLAST of MELO3C019042.jh1 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 18/65 (27.69%), Postives = 35/65 (53.85%), Query Frame = 0 

Query: 41  GFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFV 100
           GF W++  Q ++ +  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESI 147

Query: 101 DVGSN 106
             G +
Sbjct: 148 SEGES 151

The following BLAST results are available for this feature:
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441954.13.13e-10492.50PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret... [more]
KAA0062747.11.88e-7395.69retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p... [more]
KAA0043564.12.81e-6976.64retrotransposon protein [Cucumis melo var. makuwa][more]
TYK10915.12.32e-6663.13retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p... [more]
KAA0066208.17.46e-6663.75retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C019042.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C019042.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U0H71.51e-10492.50Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L31.51e-10492.50uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5D3DG229.12e-7495.69Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TJS21.36e-6976.64Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CHA01.13e-6663.13Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C019042.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27260.11.4e-0725.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.28.9e-0727.03unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02210.11.8e-0427.69unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.21.8e-0427.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 1..109
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019042.jh1.t1MELO3C019042.jh1.t1mRNA