MELO3C019029.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019029.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 15669725 .. 15670105 (+)
RNA-Seq ExpressionMELO3C019029.jh1
SyntenyMELO3C019029.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGGTATATATTATTTAAATTCTATTTCTTTAGGTTTACTATATAATGATATTATATAATTTATTTATTTGATGTTTGCAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

mRNA sequence

ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

Coding sequence (CDS)

ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

Protein sequence

MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGIVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILFS
Homology
BLAST of MELO3C019029.jh1 vs. NCBI nr
Match: KAA0066571.1 (hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK15305.1 hypothetical protein E5676_scaffold1706G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 7.10e-36
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
          MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK
Sbjct: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60

Query: 61 GIVSIDVS 68
          G+ +++V+
Sbjct: 61 GMGTMEVA 68

BLAST of MELO3C019029.jh1 vs. NCBI nr
Match: KGN47717.1 (hypothetical protein Csa_018263 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 2.52e-18
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 1   MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
           + +FY  G+  SFVAPP   P   PI D++G+Y+DVLA K DDQALD  A TSI+ED  +
Sbjct: 70  LLKFYDRGQHTSFVAPPPDPPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFE 129

Query: 61  GIVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVI 97
           GIVSI++SL G+D  +    T L+ KD+  E +   I
Sbjct: 130 GIVSINISLSGEDNIQLFVHTILELKDEDHEEERGTI 166

BLAST of MELO3C019029.jh1 vs. NCBI nr
Match: KGN66831.1 (hypothetical protein Csa_007207 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 5.82e-15
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 2  QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
          Q+FYG G+GP FVAP VG P HD    ++GHYVDVL  +ID+QALD    T  N+DP   
Sbjct: 28 QKFYGGGKGPPFVAPLVGPPVHD----LVGHYVDVLDLEIDNQALDDVVGTLTNKDPYAD 87

Query: 62 IVSIDVSLRGDD 73
          IV ID+S  G+D
Sbjct: 88 IVLIDISSVGED 95

BLAST of MELO3C019029.jh1 vs. NCBI nr
Match: TYK07506.1 (uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 9.11e-08
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           QQ Y SGEG SF A  V +   D        ++D+ AS IDDQ +DK   T I+ED   G
Sbjct: 28  QQCYSSGEGTSFNASEVDTLVDDV-------FIDIPASIIDDQLIDKEKGTYISEDLRGG 87

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILF 99
           I+ ID+ L G+D      Q  L+PKD+     + ++L+
Sbjct: 88  IILIDIPLGGEDVPPLLVQPLLEPKDEIHIFTHCILLY 118

BLAST of MELO3C019029.jh1 vs. NCBI nr
Match: TYK23889.1 (uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 1.01e-07
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0

Query: 1   MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
            +Q YGSGEG SF AP   +   D        ++++ A  ID Q  ++ ARTSI+EDP  
Sbjct: 34  FKQCYGSGEGTSFNAPEANTLVDD-------EFMNIPAPIIDAQPTNEEARTSISEDPRD 93

Query: 61  GIVSIDVSLRGDDFTRSSTQTTLKPKDKSIEL 92
           G++ IDV   G+D +  S Q  L  KD++IE+
Sbjct: 94  GVI-IDVPSEGEDVSPPSVQPMLDLKDETIEI 117

BLAST of MELO3C019029.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00120 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 3.44e-36
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
          MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK
Sbjct: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60

Query: 61 GIVSIDVS 68
          G+ +++V+
Sbjct: 61 GMGTMEVA 68

BLAST of MELO3C019029.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KH42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.22e-18
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 1   MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
           + +FY  G+  SFVAPP   P   PI D++G+Y+DVLA K DDQALD  A TSI+ED  +
Sbjct: 70  LLKFYDRGQHTSFVAPPPDPPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFE 129

Query: 61  GIVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVI 97
           GIVSI++SL G+D  +    T L+ KD+  E +   I
Sbjct: 130 GIVSINISLSGEDNIQLFVHTILELKDEDHEEERGTI 166

BLAST of MELO3C019029.jh1 vs. ExPASy TrEMBL
Match: A0A0A0M3N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.82e-15
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 2  QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
          Q+FYG G+GP FVAP VG P HD    ++GHYVDVL  +ID+QALD    T  N+DP   
Sbjct: 28 QKFYGGGKGPPFVAPLVGPPVHD----LVGHYVDVLDLEIDNQALDDVVGTLTNKDPYAD 87

Query: 62 IVSIDVSLRGDD 73
          IV ID+S  G+D
Sbjct: 88 IVLIDISSVGED 95

BLAST of MELO3C019029.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CAX9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00230 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.41e-08
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           QQ Y SGEG SF A  V +   D        ++D+ AS IDDQ +DK   T I+ED   G
Sbjct: 28  QQCYSSGEGTSFNASEVDTLVDDV-------FIDIPASIIDDQLIDKEKGTYISEDLRGG 87

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILF 99
           I+ ID+ L G+D      Q  L+PKD+     + ++L+
Sbjct: 88  IILIDIPLGGEDVPPLLVQPLLEPKDEIHIFTHCILLY 118

BLAST of MELO3C019029.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DKS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00680 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.89e-08
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0

Query: 1   MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
            +Q YGSGEG SF AP   +   D        ++++ A  ID Q  ++ ARTSI+EDP  
Sbjct: 34  FKQCYGSGEGTSFNAPEANTLVDD-------EFMNIPAPIIDAQPTNEEARTSISEDPRD 93

Query: 61  GIVSIDVSLRGDDFTRSSTQTTLKPKDKSIEL 92
           G++ IDV   G+D +  S Q  L  KD++IE+
Sbjct: 94  GVI-IDVPSEGEDVSPPSVQPMLDLKDETIEI 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0066571.17.10e-3691.18hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK1530... [more]
KGN47717.12.52e-1848.45hypothetical protein Csa_018263 [Cucumis sativus][more]
KGN66831.15.82e-1555.56hypothetical protein Csa_007207 [Cucumis sativus][more]
TYK07506.19.11e-0838.78uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa][more]
TYK23889.11.01e-0740.22uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VLS23.44e-3691.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KH421.22e-1848.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1[more]
A0A0A0M3N22.82e-1555.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1[more]
A0A5D3CAX94.41e-0838.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DKS24.89e-0840.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019029.jh1.t1MELO3C019029.jh1.t1mRNA