MELO3C019029 (gene) Melon (DHL92) v4

Overview
NameMELO3C019029
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 15909832 .. 15910212 (+)
RNA-Seq ExpressionMELO3C019029
SyntenyMELO3C019029
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGGTATATATTATTTAAATTCTATTTCTTTAGGTTTACTATATAATGATATTATATAATTTATTTATTTGATGTTTGCAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

mRNA sequence

ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

Coding sequence (CDS)

ATGCAACAATTTTATGGCAGCGGTGAAGGTCCATCATTTGTGGCACCACCCGTTGGCTCACCAACTCATGATCCTATTAGTGACATGATGGGTCATTATGTAGATGTTCTTGCTTCGAAGATTGATGACCAAGCACTTGATAAAACCGCAAGAACATCCATCAATGAAGATCCTTCCAAAGGTATTGTTTCGATTGATGTATCTTTAAGGGGCGACGATTTCACACGATCATCAACCCAAACTACACTGAAGCCGAAAGATAAGTCTATCGAGCTCGACAATAAAGTAATTTTATTCTCTTAG

Protein sequence

MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGIVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILFS
Homology
BLAST of MELO3C019029 vs. NCBI nr
Match: KAA0066571.1 (hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK15305.1 hypothetical protein E5676_scaffold1706G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 7.7e-27
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
          MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK
Sbjct: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60

Query: 61 GIVSIDVS 69
          G+ +++V+
Sbjct: 61 GMGTMEVA 68

BLAST of MELO3C019029 vs. NCBI nr
Match: KGN47717.1 (hypothetical protein Csa_018263 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 7.5e-14
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 3   QFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGI 62
           +FY  G+  SFVAPP   P   PI D++G+Y+DVLA K DDQALD  A TSI+ED  +GI
Sbjct: 72  KFYDRGQHTSFVAPPPDPPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFEGI 131

Query: 63  VSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVI 98
           VSI++SL G+D  +    T L+ KD+  E +   I
Sbjct: 132 VSINISLSGEDNIQLFVHTILELKDEDHEEERGTI 166

BLAST of MELO3C019029 vs. NCBI nr
Match: KGN66831.1 (hypothetical protein Csa_007207 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-11
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 2  QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
          Q+FYG G+GP FVAP VG P H    D++GHYVDVL  +ID+QALD    T  N+DP   
Sbjct: 28 QKFYGGGKGPPFVAPLVGPPVH----DLVGHYVDVLDLEIDNQALDDVVGTLTNKDPYAD 87

Query: 62 IVSIDVSLRGDD 74
          IV ID+S  G+D
Sbjct: 88 IVLIDISSVGED 95

BLAST of MELO3C019029 vs. NCBI nr
Match: TYK23889.1 (uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-05
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           +Q YGSGEG SF AP   +   D        ++++ A  ID Q  ++ ARTSI+EDP  G
Sbjct: 35  KQCYGSGEGTSFNAPEANTLVDD-------EFMNIPAPIIDAQPTNEEARTSISEDPRDG 94

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIEL 93
           ++ IDV   G+D +  S Q  L  KD++IE+
Sbjct: 95  VI-IDVPSEGEDVSPPSVQPMLDLKDETIEI 117

BLAST of MELO3C019029 vs. NCBI nr
Match: TYK07506.1 (uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           QQ Y SGEG SF A  V +   D        ++D+ AS IDDQ +DK   T I+ED   G
Sbjct: 28  QQCYSSGEGTSFNASEVDTLVDDV-------FIDIPASIIDDQLIDKEKGTYISEDLRGG 87

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILF 100
           I+ ID+ L G+D      Q  L+PKD+     + ++L+
Sbjct: 88  IILIDIPLGGEDVPPLLVQPLLEPKDEIHIFTHCILLY 118

BLAST of MELO3C019029 vs. ExPASy TrEMBL
Match: A0A5A7VLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00120 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.7e-27
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60
          MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK
Sbjct: 1  MQQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSK 60

Query: 61 GIVSIDVS 69
          G+ +++V+
Sbjct: 61 GMGTMEVA 68

BLAST of MELO3C019029 vs. ExPASy TrEMBL
Match: A0A0A0KH42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.6e-14
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 3   QFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGI 62
           +FY  G+  SFVAPP   P   PI D++G+Y+DVLA K DDQALD  A TSI+ED  +GI
Sbjct: 72  KFYDRGQHTSFVAPPPDPPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFEGI 131

Query: 63  VSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVI 98
           VSI++SL G+D  +    T L+ KD+  E +   I
Sbjct: 132 VSINISLSGEDNIQLFVHTILELKDEDHEEERGTI 166

BLAST of MELO3C019029 vs. ExPASy TrEMBL
Match: A0A0A0M3N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.9e-11
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 2  QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
          Q+FYG G+GP FVAP VG P H    D++GHYVDVL  +ID+QALD    T  N+DP   
Sbjct: 28 QKFYGGGKGPPFVAPLVGPPVH----DLVGHYVDVLDLEIDNQALDDVVGTLTNKDPYAD 87

Query: 62 IVSIDVSLRGDD 74
          IV ID+S  G+D
Sbjct: 88 IVLIDISSVGED 95

BLAST of MELO3C019029 vs. ExPASy TrEMBL
Match: A0A5D3DKS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00680 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.1e-06
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           +Q YGSGEG SF AP   +   D        ++++ A  ID Q  ++ ARTSI+EDP  G
Sbjct: 35  KQCYGSGEGTSFNAPEANTLVDD-------EFMNIPAPIIDAQPTNEEARTSISEDPRDG 94

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIEL 93
           ++ IDV   G+D +  S Q  L  KD++IE+
Sbjct: 95  VI-IDVPSEGEDVSPPSVQPMLDLKDETIEI 117

BLAST of MELO3C019029 vs. ExPASy TrEMBL
Match: A0A5D3CAX9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00230 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0

Query: 2   QQFYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKG 61
           QQ Y SGEG SF A  V +   D        ++D+ AS IDDQ +DK   T I+ED   G
Sbjct: 28  QQCYSSGEGTSFNASEVDTLVDDV-------FIDIPASIIDDQLIDKEKGTYISEDLRGG 87

Query: 62  IVSIDVSLRGDDFTRSSTQTTLKPKDKSIELDNKVILF 100
           I+ ID+ L G+D      Q  L+PKD+     + ++L+
Sbjct: 88  IILIDIPLGGEDVPPLLVQPLLEPKDEIHIFTHCILLY 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0066571.17.7e-2791.18hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK1530... [more]
KGN47717.17.5e-1449.47hypothetical protein Csa_018263 [Cucumis sativus][more]
KGN66831.15.9e-1155.56hypothetical protein Csa_007207 [Cucumis sativus][more]
TYK23889.11.7e-0540.66uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa][more]
TYK07506.12.2e-0538.78uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VLS23.7e-2791.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KH423.6e-1449.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1[more]
A0A0A0M3N22.9e-1155.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1[more]
A0A5D3DKS28.1e-0640.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CAX91.1e-0538.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019029.1MELO3C019029.1mRNA