Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTAGTAAGGTACTTGTGGGTCATAAGGCAAATGAGAAGGAAGATGAGAAATGAAGAAAGGGCCTTGTGCGAGGAGTGGGCTTGGCGAAAGGAGCAAAGAATAAAGGAGGACGAAGAAAGGACAAGTAAGGAACGCGCACACAAGACGTGTATGATGGAAGAGAAAAGGAAGAAGGAAGCAAAAGAAACAAGGGAGAAAGAAAAAACTCACGAGGAAGATGAGCGTCTCCGTCAAACCTTCAAAGAGAAAAAGAAGAATGTTAAGTCTTTAACAGAGACGAAGACAAAGTTGGCGAAAATCCAAACCTCCAAAAAGAAGAAACAAGAAAAGCTCACAGGCCTAAGTGAGCAAGTAGATAGTGTGGCCGCAAGATGTAAGGTGGCTAAGCATGAAAAGGTAGATTGCATGGATGCTGTGGTGGAAGAGCTTAACAGAGAAATAGAAGGAATGAGCCCATTGGAACCAAGGCTAAGGCCTAAAGAACCAAGGCTAGTCAGCACCCAACTACCAAAGAAAAGCAAAAGCAAGGCGTGGACATCTAGACCTGAGGATGTCCAAAGAGGGAACTGTTAG
mRNA sequence
ATGGGGCTAGTAAGGTACTTGTGGGTCATAAGGCAAATGAGAAGGAAGATGAGAAATGAAGAAAGGGCCTTGTGCGAGGAGTGGGCTTGGCGAAAGGAGCAAAGAATAAAGGAGGACGAAGAAAGGACAAGTAAGGAACGCGCACACAAGACGTGTATGATGGAAGAGAAAAGGAAGAAGGAAGCAAAAGAAACAAGGGAGAAAGAAAAAACTCACGAGGAAGATGAGCGTCTCCGTCAAACCTTCAAAGAGAAAAAGAAGAATGTTAAGTCTTTAACAGAGACGAAGACAAAGTTGGCGAAAATCCAAACCTCCAAAAAGAAGAAACAAGAAAAGCTCACAGGCCTAAGTGAGCAAGTAGATAGTGTGGCCGCAAGATGTAAGGTGGCTAAGCATGAAAAGGTAGATTGCATGGATGCTGTGGTGGAAGAGCTTAACAGAGAAATAGAAGGAATGAGCCCATTGGAACCAAGGCTAAGGCCTAAAGAACCAAGGCTAGTCAGCACCCAACTACCAAAGAAAAGCAAAAGCAAGGCGTGGACATCTAGACCTGAGGATGTCCAAAGAGGGAACTGTTAG
Coding sequence (CDS)
ATGGGGCTAGTAAGGTACTTGTGGGTCATAAGGCAAATGAGAAGGAAGATGAGAAATGAAGAAAGGGCCTTGTGCGAGGAGTGGGCTTGGCGAAAGGAGCAAAGAATAAAGGAGGACGAAGAAAGGACAAGTAAGGAACGCGCACACAAGACGTGTATGATGGAAGAGAAAAGGAAGAAGGAAGCAAAAGAAACAAGGGAGAAAGAAAAAACTCACGAGGAAGATGAGCGTCTCCGTCAAACCTTCAAAGAGAAAAAGAAGAATGTTAAGTCTTTAACAGAGACGAAGACAAAGTTGGCGAAAATCCAAACCTCCAAAAAGAAGAAACAAGAAAAGCTCACAGGCCTAAGTGAGCAAGTAGATAGTGTGGCCGCAAGATGTAAGGTGGCTAAGCATGAAAAGGTAGATTGCATGGATGCTGTGGTGGAAGAGCTTAACAGAGAAATAGAAGGAATGAGCCCATTGGAACCAAGGCTAAGGCCTAAAGAACCAAGGCTAGTCAGCACCCAACTACCAAAGAAAAGCAAAAGCAAGGCGTGGACATCTAGACCTGAGGATGTCCAAAGAGGGAACTGTTAG
Protein sequence
MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTSKERAHKTCMMEEKRKKEAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAWTSRPEDVQRGNC
Homology
BLAST of MELO3C018955.jh1 vs. NCBI nr
Match:
KAA0053403.1 (hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa])
HSP 1 Score: 348 bits (893), Expect = 2.69e-120
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTSKERAHKTCMMEEKRKK 60
MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERT+KERAHKTCMMEEKRKK
Sbjct: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTNKERAHKTCMMEEKRKK 60
Query: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV
Sbjct: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
Query: 121 DSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
DSVAARCKVAKHEKVDCMD VVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW
Sbjct: 121 DSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
Query: 181 TSRPEDVQRGNC 192
TSRPEDVQRGNC
Sbjct: 181 TSRPEDVQRGNC 192
BLAST of MELO3C018955.jh1 vs. NCBI nr
Match:
TYK15883.1 (hypothetical protein E5676_scaffold637G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 343 bits (880), Expect = 2.58e-118
Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTSKERAHKTCMMEEKRKK 60
MGLVRYLWVIRQMRRKMRNEERALCEE AWRKEQRIKEDEERT+KERAHKTCMMEEKRKK
Sbjct: 1 MGLVRYLWVIRQMRRKMRNEERALCEERAWRKEQRIKEDEERTNKERAHKTCMMEEKRKK 60
Query: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV
Sbjct: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
Query: 121 DSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
DSVAARCKVAKHEKVDC+DAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW
Sbjct: 121 DSVAARCKVAKHEKVDCLDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
Query: 181 TSRPEDVQRGNC 192
TSRPEDVQRGNC
Sbjct: 181 TSRPEDVQRGNC 192
BLAST of MELO3C018955.jh1 vs. NCBI nr
Match:
KAA0066651.1 (hypothetical protein E6C27_scaffold979G00830 [Cucumis melo var. makuwa] >TYK04094.1 hypothetical protein E5676_scaffold2119G00320 [Cucumis melo var. makuwa])
HSP 1 Score: 139 bits (350), Expect = 2.98e-38
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 45 KERAHKTCMMEEKRKKEAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQT 104
+E AHK+CMM EKRK+E +E R K K E+D+R Q FKEKKKNV+SL ETKTK+A+IQT
Sbjct: 6 RESAHKSCMMMEKRKREEEEKRRKVKGREQDDRFCQVFKEKKKNVESLAETKTKMAEIQT 65
Query: 105 SKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEP 164
KKKKQ L LSEQV+SV R KV H++VD +D V E +++IE MSPLE RLRPKE
Sbjct: 66 DKKKKQTMLVDLSEQVESVTMRNKVVAHQEVDRLDVVAVEFSQKIERMSPLELRLRPKER 125
Query: 165 RLVSTQLPKKSKSKAWTSRPEDVQRGN 191
LVS PKK K+K TS+ EDV++G+
Sbjct: 126 GLVSATQPKKDKNKVVTSKLEDVKKGS 152
BLAST of MELO3C018955.jh1 vs. NCBI nr
Match:
KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 139 bits (351), Expect = 1.13e-37
Identity = 84/129 (65.12%), Postives = 100/129 (77.52%), Query Frame = 0
Query: 63 KETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQVDS 122
KE R KEK HEEDE LRQ FKEKKKNVKSL ETKTKL++IQT+KKKKQE L LSEQ +S
Sbjct: 82 KERRRKEKGHEEDESLRQVFKEKKKNVKSLAETKTKLSEIQTAKKKKQETLANLSEQAES 141
Query: 123 VAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAWTS 182
VA + K ++V+ ++ VVEE ++EI+ MS LEPRLRPKE LVS PKK K+K TS
Sbjct: 142 VATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQPKKGKNKEGTS 201
Query: 183 RPEDVQRGN 191
RPEDVQ+G+
Sbjct: 202 RPEDVQKGS 210
BLAST of MELO3C018955.jh1 vs. NCBI nr
Match:
TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 142 bits (358), Expect = 3.71e-36
Identity = 89/148 (60.14%), Postives = 116/148 (78.38%), Query Frame = 0
Query: 32 KEQRIKEDEERTSKERAHKTCMMEEKRKKEAKETREKEKTHEEDERLRQTFKEKKKNVKS 91
K+++ KE+E + K+ +T E +R+K K +E+EK ++EDE LRQTFKEKKKNV S
Sbjct: 182 KDEKRKEEERKKQKKDEERTLQEEWERRKRKK--KEREKAYKEDEHLRQTFKEKKKNVTS 241
Query: 92 LTETKTKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDAVVEELNREIEG 151
L ETKTKLA++QT+KKKKQE L G SEQV+SV R KV +HE+VD +D V +EL+REIEG
Sbjct: 242 LVETKTKLAEVQTTKKKKQETLAGQSEQVESVDTRSKVIEHEEVDRVDVVAKELSREIEG 301
Query: 152 MSPLEPRLRPKEPRLVSTQLPKKSKSKA 179
MSPL+PRLRP+E L++TQLPKK KSK+
Sbjct: 302 MSPLKPRLRPEEQGLINTQLPKKRKSKS 327
BLAST of MELO3C018955.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7UBY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00710 PE=4 SV=1)
HSP 1 Score: 348 bits (893), Expect = 1.30e-120
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTSKERAHKTCMMEEKRKK 60
MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERT+KERAHKTCMMEEKRKK
Sbjct: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTNKERAHKTCMMEEKRKK 60
Query: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV
Sbjct: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
Query: 121 DSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
DSVAARCKVAKHEKVDCMD VVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW
Sbjct: 121 DSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
Query: 181 TSRPEDVQRGNC 192
TSRPEDVQRGNC
Sbjct: 181 TSRPEDVQRGNC 192
BLAST of MELO3C018955.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3CVJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00630 PE=4 SV=1)
HSP 1 Score: 343 bits (880), Expect = 1.25e-118
Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MGLVRYLWVIRQMRRKMRNEERALCEEWAWRKEQRIKEDEERTSKERAHKTCMMEEKRKK 60
MGLVRYLWVIRQMRRKMRNEERALCEE AWRKEQRIKEDEERT+KERAHKTCMMEEKRKK
Sbjct: 1 MGLVRYLWVIRQMRRKMRNEERALCEERAWRKEQRIKEDEERTNKERAHKTCMMEEKRKK 60
Query: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV
Sbjct: 61 EAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQV 120
Query: 121 DSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
DSVAARCKVAKHEKVDC+DAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW
Sbjct: 121 DSVAARCKVAKHEKVDCLDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAW 180
Query: 181 TSRPEDVQRGNC 192
TSRPEDVQRGNC
Sbjct: 181 TSRPEDVQRGNC 192
BLAST of MELO3C018955.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3BYN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00320 PE=4 SV=1)
HSP 1 Score: 139 bits (350), Expect = 1.44e-38
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 45 KERAHKTCMMEEKRKKEAKETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQT 104
+E AHK+CMM EKRK+E +E R K K E+D+R Q FKEKKKNV+SL ETKTK+A+IQT
Sbjct: 6 RESAHKSCMMMEKRKREEEEKRRKVKGREQDDRFCQVFKEKKKNVESLAETKTKMAEIQT 65
Query: 105 SKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEP 164
KKKKQ L LSEQV+SV R KV H++VD +D V E +++IE MSPLE RLRPKE
Sbjct: 66 DKKKKQTMLVDLSEQVESVTMRNKVVAHQEVDRLDVVAVEFSQKIERMSPLELRLRPKER 125
Query: 165 RLVSTQLPKKSKSKAWTSRPEDVQRGN 191
LVS PKK K+K TS+ EDV++G+
Sbjct: 126 GLVSATQPKKDKNKVVTSKLEDVKKGS 152
BLAST of MELO3C018955.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)
HSP 1 Score: 139 bits (351), Expect = 5.48e-38
Identity = 84/129 (65.12%), Postives = 100/129 (77.52%), Query Frame = 0
Query: 63 KETREKEKTHEEDERLRQTFKEKKKNVKSLTETKTKLAKIQTSKKKKQEKLTGLSEQVDS 122
KE R KEK HEEDE LRQ FKEKKKNVKSL ETKTKL++IQT+KKKKQE L LSEQ +S
Sbjct: 82 KERRRKEKGHEEDESLRQVFKEKKKNVKSLAETKTKLSEIQTAKKKKQETLANLSEQAES 141
Query: 123 VAARCKVAKHEKVDCMDAVVEELNREIEGMSPLEPRLRPKEPRLVSTQLPKKSKSKAWTS 182
VA + K ++V+ ++ VVEE ++EI+ MS LEPRLRPKE LVS PKK K+K TS
Sbjct: 142 VATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQPKKGKNKEGTS 201
Query: 183 RPEDVQRGN 191
RPEDVQ+G+
Sbjct: 202 RPEDVQKGS 210
BLAST of MELO3C018955.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)
HSP 1 Score: 142 bits (358), Expect = 1.79e-36
Identity = 89/148 (60.14%), Postives = 116/148 (78.38%), Query Frame = 0
Query: 32 KEQRIKEDEERTSKERAHKTCMMEEKRKKEAKETREKEKTHEEDERLRQTFKEKKKNVKS 91
K+++ KE+E + K+ +T E +R+K K +E+EK ++EDE LRQTFKEKKKNV S
Sbjct: 182 KDEKRKEEERKKQKKDEERTLQEEWERRKRKK--KEREKAYKEDEHLRQTFKEKKKNVTS 241
Query: 92 LTETKTKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDAVVEELNREIEG 151
L ETKTKLA++QT+KKKKQE L G SEQV+SV R KV +HE+VD +D V +EL+REIEG
Sbjct: 242 LVETKTKLAEVQTTKKKKQETLAGQSEQVESVDTRSKVIEHEEVDRVDVVAKELSREIEG 301
Query: 152 MSPLEPRLRPKEPRLVSTQLPKKSKSKA 179
MSPL+PRLRP+E L++TQLPKK KSK+
Sbjct: 302 MSPLKPRLRPEEQGLINTQLPKKRKSKS 327
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0053403.1 | 2.69e-120 | 98.96 | hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa] | [more] |
| TYK15883.1 | 2.58e-118 | 98.44 | hypothetical protein E5676_scaffold637G00630 [Cucumis melo var. makuwa] | [more] |
| KAA0066651.1 | 2.98e-38 | 59.86 | hypothetical protein E6C27_scaffold979G00830 [Cucumis melo var. makuwa] >TYK0409... | [more] |
| KAA0052868.1 | 1.13e-37 | 65.12 | stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ... | [more] |
| TYK25721.1 | 3.71e-36 | 60.14 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UBY9 | 1.30e-120 | 98.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CVJ5 | 1.25e-118 | 98.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BYN0 | 1.44e-38 | 59.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BXZ2 | 5.48e-38 | 65.12 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3DPW8 | 1.79e-36 | 60.14 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
