MELO3C018835.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C018835.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RNase III domain-containing protein
Location	chr01: 3210051 .. 3212725 (-)
RNA-Seq Expression	MELO3C018835.jh1
Synteny	MELO3C018835.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGATAGAGCAATAGAGGAAGAGAAAGAAATCCCCACAGCCAACAAAATAAAATTAAGTTTTGGTTTGAGAATCCCCAAAATCCCGGCATGGAAGGAGAAGAACAGAGAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTACTGGAAGAGGCTTTTACGGACGCTTCCTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGCCTCCGAGCTGCGAATGTGGACACGGAAAAACTTGCTCGAGTAGCTATTACTCATGGATTTCATCGGTATCTTCGCCACAACAAAGCCGATCTTCATCAAAAAGTAAGTATCATCAGTTATATATATATATATATATATATATATATATATATATATTTTTTTAAAAATCTTCATCCGTTCTCATCGTTCTCATCGTCTACTCATTAAACTTCCTAATTGATCCCTCTCTCTCTCTCTCTCTCTTTTTCATAATTATAATCATTTAATTCTTAACCAACCCATCCTTATGACCATCTTTCTATTTTCTTAAAATTGAATTTACACACAATTACCCTAATGACAGGCTGTAGGTTGAAGATATAAGTATCGTAGTTAATATATTTGCAGCTCCAAATATGGGTGAATTATAACAATTCACCAAACTGGGCAATATTTCTTTGAAAAGAAGTTAATATGTGATATCTTTTTCTTTACATTCATTATGCATCCAACATTTATAAAATAAATCAGTAAGTTTAATTTTCTTCGTTATTTAATATGATAGAATATCTAGAGGTTCATCTTCCAAATATAGAAACTATCATCCTAATTAAACAATAAACCAAATGTTAATAGAGATTGAATGAGCTAATTTCTTCAAAGTTAGAGAGATTTAATATTAGTGTATAAGAATTGATCTTTGAAGTTTAGAAACATATAAGGAAAGAGGGATACATATATATATATATATATATATATATATATATTATATTCTCAAAATGAAAGTTAAAATTTCAAAGTTAACTTTAGTTAAATGGTTTGACTTTCTAAAATTGCCTAATTAATTTTTAACATATTTAAAATAAAATGGGAGTTTCTAAGTTAGAGTAAAGTTTAGGAACAATGTATTAAAATACAATAGTGAAATTTTTAAAATTTATGGATGAAATATATATCATTTGAACTTTCTCATAACCATTCCTTTTAAATATACTTTCAATTTTTCTCTTTTTGGTAAGGAACTTTTTCTAATTCCTTTCTTTTCATGTGGCTTGAGTTTTAGTTCTTTTGTTTAATATCTTTCTTTTTTGTCACATCTCTAGTGAAGAGAACATAATTGAAAAAGAAACTTTTTCTATAATCGCTTTAAATTTTAATGAAACTTTGAATTAAGATACTAATTATTTTGAGTTAAATTTGTTTAATACTTACTTTTTTATGATAAAAATTTTTAAAAGAAAAGAATTACCATTTTAGTAGGTAAAGTTTTAATATTTTTAGTCATAGAAGGAAAGCAAAAATATATATACACAGACGTCATTGATGTTATCACTAACCATTTGATGTCCATAAAGAATTGGTATAACACATAAGTTCTATTAATCAATTGGCTTATTGCAATAATGAAAATGATTGACTTCTTCTATAGTATTTTGTACTTTTATCATTTAGAATTGGAATCTTTTTGCCAAATAAAGTCATAATATTTTGGAGTTTTGAATTAAATTTCAAAACATAATCTTTAGTTCAGAAGAAAATAAAAAAAAAATGAAAAAAAAAATGCACATATAGTTTGGTTTTCATTTTTATTTTTGTATCAGTTAACTAATTAACTGAGATGACAGATAGAAGAGTTTGGTAGAAGTATAGAGGAATATCCATTACATTCTAATGGAATGATAAAAGCCCCAAAAGTCCTAGCCGACATTGTTGAATCAACCATTGGAGCTGTTTTCGCCGATAGCAACTCCATTGACATTGTTTGGAAGGTACTTACTATTTATACTCAACTATTATTCCAATGTATTCCGTGTTTCGTTTTATCTTTATGACTTCATTCAACTATTACGATTATCTAATTAGAGACGAAAAAAAGATGTTTTAAAAACTTAAGTGAGTAAACAAGAACATAACTTAAACTAGATCTAATCGTTGGTTTGAACTAATTTAAAGAAAGATGAGACAAAGGTTTTGGATTATGTGTAGATATTTAAGGAATTAATGGAGCCATTGATAACATTGAAGACAATGAAGAAACATCCAATGACGGAATTGACAGAAATGTGTCAAAAGAGAAACCTGAAGTTGGAGTTCAGAGATCGTTGGCAGGAAACAAAAGAAATAGAAGTTTTGATAGAGAAACAACTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATCGCACAAAATAGAGCTGCTAAAAATGCTTTGGACAACTTAGACGCATTTTTTCCACAATTTAATCAACCTTGTCAACCTATGTAATTTCATTCTCTTTCATACATATACTTTTTATATCTATATATCGTAATTATTACCTATCTTTGTAA

mRNA sequence

ATTTGATAGAGCAATAGAGGAAGAGAAAGAAATCCCCACAGCCAACAAAATAAAATTAAGTTTTGGTTTGAGAATCCCCAAAATCCCGGCATGGAAGGAGAAGAACAGAGAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTACTGGAAGAGGCTTTTACGGACGCTTCCTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGCCTCCGAGCTGCGAATGTGGACACGGAAAAACTTGCTCGAGTAGCTATTACTCATGGATTTCATCGGTATCTTCGCCACAACAAAGCCGATCTTCATCAAAAAATAGAAGAGTTTGGTAGAAGTATAGAGGAATATCCATTACATTCTAATGGAATGATAAAAGCCCCAAAAGTCCTAGCCGACATTGTTGAATCAACCATTGGAGCTGTTTTCGCCGATAGCAACTCCATTGACATTGTTTGGAAGATATTTAAGGAATTAATGGAGCCATTGATAACATTGAAGACAATGAAGAAACATCCAATGACGGAATTGACAGAAATGTGTCAAAAGAGAAACCTGAAGTTGGAGTTCAGAGATCGTTGGCAGGAAACAAAAGAAATAGAAGTTTTGATAGAGAAACAACTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATCGCACAAAATAGAGCTGCTAAAAATGCTTTGGACAACTTAGACGCATTTTTTCCACAATTTAATCAACCTTGTCAACCTATGTAATTTCATTCTCTTTCATACATATACTTTTTATATCTATATATCGTAATTATTACCTATCTTTGTAA

Coding sequence (CDS)

ATGGAAGGAGAAGAACAGAGAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTACTGGAAGAGGCTTTTACGGACGCTTCCTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGCCTCCGAGCTGCGAATGTGGACACGGAAAAACTTGCTCGAGTAGCTATTACTCATGGATTTCATCGGTATCTTCGCCACAACAAAGCCGATCTTCATCAAAAAATAGAAGAGTTTGGTAGAAGTATAGAGGAATATCCATTACATTCTAATGGAATGATAAAAGCCCCAAAAGTCCTAGCCGACATTGTTGAATCAACCATTGGAGCTGTTTTCGCCGATAGCAACTCCATTGACATTGTTTGGAAGATATTTAAGGAATTAATGGAGCCATTGATAACATTGAAGACAATGAAGAAACATCCAATGACGGAATTGACAGAAATGTGTCAAAAGAGAAACCTGAAGTTGGAGTTCAGAGATCGTTGGCAGGAAACAAAAGAAATAGAAGTTTTGATAGAGAAACAACTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATCGCACAAAATAGAGCTGCTAAAAATGCTTTGGACAACTTAGACGCATTTTTTCCACAATTTAATCAACCTTGTCAACCTATGTAA

Protein sequence

MEGEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCQPM

Homology

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BLAST of MELO3C018835.jh1 vs. NCBI nr
Match: XP_004144598.1 (ribonuclease 3-like protein 3 [Cucumis sativus] >KGN43500.1 hypothetical protein Csa_020414 [Cucumis sativus])

HSP 1 Score: 497 bits (1279), Expect = 1.55e-176
Identity = 253/264 (95.83%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 5   EQRDGSRGG--EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 64
           E +DGSRGG  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 12  EGKDGSRGGGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 71

Query: 65  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 124
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD
Sbjct: 72  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 131

Query: 125 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEP 184
           LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEP
Sbjct: 132 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKIFKELMEP 191

Query: 185 LITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQN 244
           LITLKTMKKHPMTELTEMCQKR+LKLEFRDRW+ETKEIEVLIEKQ+VGKGSYRKKLIAQN
Sbjct: 192 LITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRKKLIAQN 251

Query: 245 RAAKNALDNLDAFFPQFNQPCQPM 266
           RAAKNAL+NLD FFPQFNQPCQPM
Sbjct: 252 RAAKNALENLDTFFPQFNQPCQPM 275

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BLAST of MELO3C018835.jh1 vs. NCBI nr
Match: XP_038888348.1 (ribonuclease 3-like protein 3 [Benincasa hispida])

HSP 1 Score: 454 bits (1169), Expect = 8.32e-160
Identity = 235/273 (86.08%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MEGEEQR-------DGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSP 60
           ME EEQR         S GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASYSP
Sbjct: 1   MEEEEQRVVFLEEEGSSGGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSP 60

Query: 61  ENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH 120
           ENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH
Sbjct: 61  ENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH 120

Query: 121 RYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVW 180
           RYLRHNK DLH KIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSNSI+ VW
Sbjct: 121 RYLRHNKPDLHPKIEEFIKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIETVW 180

Query: 181 KIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGS 240
           KIFK+LMEPLITLKTMKKHPMTELTE+CQKRNL LEF D W+E KE++V I+KQLVGKGS
Sbjct: 181 KIFKDLMEPLITLKTMKKHPMTELTEICQKRNLNLEFVDCWEERKEVQVFIDKQLVGKGS 240

Query: 241 YRKKLIAQNRAAKNALDNLDAFFPQFNQPCQPM 266
           YRKKLIAQNRAAK+AL+NLD    +FNQPCQPM
Sbjct: 241 YRKKLIAQNRAAKDALNNLDRVLGEFNQPCQPM 273

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BLAST of MELO3C018835.jh1 vs. NCBI nr
Match: XP_023554575.1 (ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1103), Expect = 7.31e-150
Identity = 217/253 (85.77%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 14  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL 73
           E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL
Sbjct: 14  EGRGGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL 73

Query: 74  ITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRS 133
           ITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF ++
Sbjct: 74  ITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKN 133

Query: 134 IEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP 193
           IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Sbjct: 134 IEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHP 193

Query: 194 MTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLD 253
           MTELTEMCQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN  
Sbjct: 194 MTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFH 253

Query: 254 AFFPQFNQPCQPM 266
               QFN+PCQPM
Sbjct: 254 TILGQFNEPCQPM 266

[Close]

BLAST of MELO3C018835.jh1 vs. NCBI nr
Match: XP_022969213.1 (ribonuclease 3-like protein 3 [Cucurbita maxima])

HSP 1 Score: 429 bits (1103), Expect = 7.31e-150
Identity = 217/249 (87.15%), Postives = 227/249 (91.16%), Query Frame = 0


Query: 18  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE 77
           G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE
Sbjct: 18  GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE 77

Query: 78  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEY 137
           QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF ++IEEY
Sbjct: 78  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEY 137

Query: 138 PLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTEL 197
           PLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTEL
Sbjct: 138 PLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTEL 197

Query: 198 TEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP 257
           TEMCQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      
Sbjct: 198 TEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFHTILG 257

Query: 258 QFNQPCQPM 266
           QFN+PCQPM
Sbjct: 258 QFNEPCQPM 266

[Close]

BLAST of MELO3C018835.jh1 vs. NCBI nr
Match: KAG6572281.1 (Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429 bits (1102), Expect = 1.04e-149
Identity = 220/266 (82.71%), Postives = 232/266 (87.22%), Query Frame = 0


Query: 1   MEGEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEG   R      E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGRGDRGDLLKQEGRGGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELM 180
           ADL QKIEEF ++IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIA 240
           EPLITLKTMK+HPMTELTEMCQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKNALDNLDAFFPQFNQPCQPM 266
           QNRAAK+ALDN      QFN+PCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot
Match: Q69KJ0 (Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0358800 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-59
Identity = 120/237 (50.63%), Postives = 169/237 (71.31%), Query Frame = 0


Query: 22  PASLDGIEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQY 81
           P  +  +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE +
Sbjct: 36  PGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVF 95

Query: 82  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPL 141
            +   L PG LTRLRAANVD EKLARVA+ HG H +LRH   +L  +I +F   +  YP+
Sbjct: 96  LTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPI 155

Query: 142 HSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELT 201
           HSNG++  PKVL D+VES IGA++ DSN + +IVW++F++L +PLI+L+T+ KHP++EL 
Sbjct: 156 HSNGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSELF 215

Query: 202 EMCQK--RNLKLEFRDRWQETKEIEVLIEKQLVGKGSY-RKKLIAQNRAAKNALDNL 253
           E CQK  R +K+  +D W +   +EVLI+ ++VG+ +Y +KK IAQNRAAK ALD L
Sbjct: 216 EFCQKTRRGVKI-VKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDKL 271

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42
Identity = 101/231 (43.72%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 27   GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 86
            G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L 
Sbjct: 1561 GLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLP 1620

Query: 87   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEE------YPLH 146
            PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++I EF + ++       +   
Sbjct: 1621 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSF 1680

Query: 147  SNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTE 206
              G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E
Sbjct: 1681 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQE 1740

Query: 207  MCQKRNLKLEFR-DRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL 250
             CQ++   LE++  R   T  +EV I+   VG     +K +AQ  AA+NAL
Sbjct: 1741 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNAL 1791

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41
Identity = 98/234 (41.88%), Postives = 141/234 (60.26%), Query Frame = 0


Query: 24   SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 83
            + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  
Sbjct: 1537 NFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYT 1596

Query: 84   NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN- 143
            +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L  +I EF + ++E  L    
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656

Query: 144  -----GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTE 203
                 G  KAPKVL DIVES  GA+F DS     +VWK+F+ L+ P++T +T+  HP+ E
Sbjct: 1657 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRE 1716

Query: 204  LTEMCQKRNLKLEFR-DRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL 250
            L E CQ++   LE++  R      +EV ++   +G     +K +AQ  AA+NAL
Sbjct: 1717 LQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNAL 1770

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot
Match: Q9LTQ0 (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.4e-40
Identity = 97/255 (38.04%), Postives = 153/255 (60.00%), Query Frame = 0


Query: 10  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSV 69
           S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS 
Sbjct: 45  SPSAPSVPVSSEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSA 104

Query: 70  LNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEE 129
           +   I+   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   L +K++E
Sbjct: 105 IGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKE 164

Query: 130 FGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLIT 189
           F  ++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++T
Sbjct: 165 FSEAVGKEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVT 224

Query: 190 LKTMKK--HPMTELTEMCQKRNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQN 249
           L  ++K   P++ L ++C K   +++ ++       I V+ ++ +L+  G    K IA+ 
Sbjct: 225 LDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARL 284

Query: 250 RAAKNALDNLDAFFP 258
            AAK AL  L   FP
Sbjct: 285 IAAKEALRKLSEVFP 297

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot
Match: Q6ATG6 (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 9.8e-40
Identity = 95/235 (40.43%), Postives = 144/235 (61.28%), Query Frame = 0


Query: 28  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSP 87
           +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L P
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFA-DDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGP 99

Query: 88  GSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYP-------LH 147
           G L+ LRAAN+ TEKLARVA+ H  +  LR N   L   + +F  ++++ P        +
Sbjct: 100 GPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPY 159

Query: 148 SNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTE 207
              ++KAPKVLADIVE+   AV+ D    ++ +WK+ + L EP+IT +T+ + P+T L E
Sbjct: 160 GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVTMLHE 219

Query: 208 MCQKRNLKLEFRDRWQE--TKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNL 253
           +CQK     +F+  WQ+     + V +  +LVG GS  +K+IA+  AA++A   L
Sbjct: 220 LCQKHGKMAQFK-TWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKL 272

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K1J8 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 PE=4 SV=1)

HSP 1 Score: 497 bits (1279), Expect = 7.50e-177
Identity = 253/264 (95.83%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 5   EQRDGSRGG--EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 64
           E +DGSRGG  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 12  EGKDGSRGGGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 71

Query: 65  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 124
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD
Sbjct: 72  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 131

Query: 125 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEP 184
           LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEP
Sbjct: 132 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKIFKELMEP 191

Query: 185 LITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQN 244
           LITLKTMKKHPMTELTEMCQKR+LKLEFRDRW+ETKEIEVLIEKQ+VGKGSYRKKLIAQN
Sbjct: 192 LITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRKKLIAQN 251

Query: 245 RAAKNALDNLDAFFPQFNQPCQPM 266
           RAAKNAL+NLD FFPQFNQPCQPM
Sbjct: 252 RAAKNALENLDTFFPQFNQPCQPM 275

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I0C1 (ribonuclease 3-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468279 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 3.54e-150
Identity = 217/249 (87.15%), Postives = 227/249 (91.16%), Query Frame = 0


Query: 18  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE 77
           G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE
Sbjct: 18  GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITRE 77

Query: 78  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEY 137
           QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF ++IEEY
Sbjct: 78  QYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEY 137

Query: 138 PLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTEL 197
           PLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTEL
Sbjct: 138 PLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTEL 197

Query: 198 TEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP 257
           TEMCQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      
Sbjct: 198 TEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFHTILG 257

Query: 258 QFNQPCQPM 266
           QFN+PCQPM
Sbjct: 258 QFNEPCQPM 266

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GKQ4 (ribonuclease 3-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111455247 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 8.31e-149
Identity = 215/253 (84.98%), Postives = 227/253 (89.72%), Query Frame = 0


Query: 14  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL 73
           E   G  + ASLDG+EAIL YEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL
Sbjct: 14  EGRGGESTAASLDGMEAILKYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFL 73

Query: 74  ITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRS 133
           ITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF ++
Sbjct: 74  ITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKN 133

Query: 134 IEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP 193
           IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Sbjct: 134 IEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHP 193

Query: 194 MTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLD 253
           MTELTEMCQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN  
Sbjct: 194 MTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFH 253

Query: 254 AFFPQFNQPCQPM 266
               QFN+PCQPM
Sbjct: 254 TILGQFNEPCQPM 266

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C375 (ribonuclease 3-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111007843 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 1.25e-144
Identity = 205/248 (82.66%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 19  SDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQ 78
           S+SP SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQ
Sbjct: 33  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQ 92

Query: 79  YFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYP 138
           YFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL +KIEEF   ++EYP
Sbjct: 93  YFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKIEEFAEGMKEYP 152

Query: 139 LHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELT 198
           LHSNG+IKAPK+LADIVESTIGAVF DSNS+D VW IF+ LMEPLITLKT+K+HPMTELT
Sbjct: 153 LHSNGLIKAPKILADIVESTIGAVFTDSNSMDTVWTIFRGLMEPLITLKTIKRHPMTELT 212

Query: 199 EMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQ 258
           E+CQKRNLKLEF D W++TKE++V I+KQLVGKGSYRKKLIAQNRAAK+AL+NLD    Q
Sbjct: 213 EICQKRNLKLEFVDSWEKTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVQ 272

Query: 259 FNQPCQPM 266
            NQPCQPM
Sbjct: 273 INQPCQPM 280

[Close]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL
Match: A0A1Q3BNT8 (Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13208 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 1.05e-98
Identity = 153/231 (66.23%), Postives = 191/231 (82.68%), Query Frame = 0


Query: 25  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNP 84
           L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  P
Sbjct: 1   LEGVEEILGYKFGNKSLLEEAFTHASYTSPDQCASYERLEFVGDSVLNLLFTKEQYFLYP 60

Query: 85  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNG 144
           NL PG LTRLRAANVDTEKLARV+I HG HRYL H K  L Q+I+EF ++I +YPLHSNG
Sbjct: 61  NLQPGDLTRLRAANVDTEKLARVSIRHGLHRYLCHKKPLLEQQIQEFTQAILDYPLHSNG 120

Query: 145 MIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ 204
           ++  PKVLADIVESTIGAVF DSN SIDIVWK+FK L+EP+I+++T+K+HP+TEL E+CQ
Sbjct: 121 LVDPPKVLADIVESTIGAVFIDSNLSIDIVWKVFKGLLEPIISVETLKRHPVTELYEVCQ 180

Query: 205 KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSY-RKKLIAQNRAAKNALDNL 252
           K+NLK++F D W+E+   EV I+ QLVG+ +Y  KK IA NRAAK+AL+N+
Sbjct: 181 KKNLKVKFVDLWKESTAFEVFIDDQLVGRDTYGTKKEIAHNRAAKDALNNM 231

[Close]

BLAST of MELO3C018835.jh1 vs. TAIR 10
Match: AT4G15417.1 (RNAse II-like 1 )

HSP 1 Score: 251.1 bits (640), Expect = 9.7e-67
Identity = 136/260 (52.31%), Postives = 175/260 (67.31%), Query Frame = 0


Query: 9   GSRGGEAVNGSDSPAS-----------LDGIEAILNYEFRDKRLLEEAFTDASYSPENCS 68
           GS+   A++G D+  +           ++ +E ILNY+F+DK LL +AFTDASY  +   
Sbjct: 2   GSQLSNAIDGKDNTKTIGSADPDQLMEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSE 61

Query: 69  SFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR 128
           S+E LE +GDS+LN  I  +     P  +PG LT+LRA NVDTEKLARVA+ H  + YLR
Sbjct: 62  SYELLELLGDSILNMGIIYDFIKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLR 121

Query: 129 HNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFK 188
           H K  L ++I EF  ++E+YPLHSNG++K PKVLADIVESTIGA+F D NS + VWK+ K
Sbjct: 122 HKKPLLEEQILEFVEAMEKYPLHSNGLLKVPKVLADIVESTIGAIFMDCNSTETVWKVIK 181

Query: 189 ELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYR-K 248
            L+EP+I L  MK HPMTEL EMCQKRNLKL  +D W+E +     IE + VG G +  K
Sbjct: 182 PLLEPIIHLDKMKSHPMTELNEMCQKRNLKLTSKDTWEENQTYCFHIEDKFVGCGHHPVK 241

Query: 249 KLIAQNRAAKNALDNLDAFF 257
           K  A+N AAKNA+DN   FF
Sbjct: 242 KETARNFAAKNAIDNFAKFF 261

[Close]

BLAST of MELO3C018835.jh1 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 174.9 bits (442), Expect = 8.8e-44
Identity = 101/231 (43.72%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 27   GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 86
            G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L 
Sbjct: 1561 GLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLP 1620

Query: 87   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEE------YPLH 146
            PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++I EF + ++       +   
Sbjct: 1621 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSF 1680

Query: 147  SNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTE 206
              G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E
Sbjct: 1681 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQE 1740

Query: 207  MCQKRNLKLEFR-DRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL 250
             CQ++   LE++  R   T  +EV I+   VG     +K +AQ  AA+NAL
Sbjct: 1741 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNAL 1791

[Close]

BLAST of MELO3C018835.jh1 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 174.9 bits (442), Expect = 8.8e-44
Identity = 101/231 (43.72%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 27   GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 86
            G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L 
Sbjct: 1562 GLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLP 1621

Query: 87   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEE------YPLH 146
            PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++I EF + ++       +   
Sbjct: 1622 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSF 1681

Query: 147  SNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTE 206
              G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E
Sbjct: 1682 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQE 1741

Query: 207  MCQKRNLKLEFR-DRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL 250
             CQ++   LE++  R   T  +EV I+   VG     +K +AQ  AA+NAL
Sbjct: 1742 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNAL 1792

[Close]

BLAST of MELO3C018835.jh1 vs. TAIR 10
Match: AT3G20420.1 (RNAse THREE-like protein 2 )

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-41
Identity = 97/255 (38.04%), Postives = 153/255 (60.00%), Query Frame = 0


Query: 10  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSV 69
           S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS 
Sbjct: 45  SPSAPSVPVSSEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSA 104

Query: 70  LNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEE 129
           +   I+   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   L +K++E
Sbjct: 105 IGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKE 164

Query: 130 FGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLIT 189
           F  ++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++T
Sbjct: 165 FSEAVGKEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVT 224

Query: 190 LKTMKK--HPMTELTEMCQKRNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQN 249
           L  ++K   P++ L ++C K   +++ ++       I V+ ++ +L+  G    K IA+ 
Sbjct: 225 LDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARL 284

Query: 250 RAAKNALDNLDAFFP 258
            AAK AL  L   FP
Sbjct: 285 IAAKEALRKLSEVFP 297

[Close]

BLAST of MELO3C018835.jh1 vs. TAIR 10
Match: AT3G03300.1 (dicer-like 2 )

HSP 1 Score: 135.6 bits (340), Expect = 5.9e-32
Identity = 91/240 (37.92%), Postives = 135/240 (56.25%), Query Frame = 0


Query: 28   IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 87
            +E++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LS
Sbjct: 1152 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1211

Query: 88   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHS----N 147
            PG LT +R+A+V+ E  A VA+    H+++ +    LH+ I       E+  L S     
Sbjct: 1212 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1271

Query: 148  GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMC 207
              I  PKVL D++ES  GA+F DS  + ++V+   K L+  +IT +T+K HP+ ELTE+C
Sbjct: 1272 SDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1331

Query: 208  QKRNLKL----EFRDRWQETKEIEVLI-------EKQLVGKGSYRKKLIAQNRAAKNALD 251
            QK   +L    +F     E K  E+         +K++  K +Y++ L       KN+LD
Sbjct: 1332 QKWQFELSKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVL----NLLKNSLD 1387

The following BLAST results are available for this feature:

BLAST of MELO3C018835.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144598.1	1.55e-176	95.83	ribonuclease 3-like protein 3 [Cucumis sativus] >KGN43500.1 hypothetical protein...	[more]
XP_038888348.1	8.32e-160	86.08	ribonuclease 3-like protein 3 [Benincasa hispida]	[more]
XP_023554575.1	7.31e-150	85.77	ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022969213.1	7.31e-150	87.15	ribonuclease 3-like protein 3 [Cucurbita maxima]	[more]
KAG6572281.1	1.04e-149	82.71	Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C018835.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q69KJ0	2.5e-59	50.63	Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0...	[more]
Q9SP32	1.2e-42	43.72	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV...	[more]
Q8LMR2	2.3e-41	41.88	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]
Q9LTQ0	4.4e-40	38.04	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1	[more]
Q6ATG6	9.8e-40	40.43	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0...	[more]

BLAST of MELO3C018835.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1J8	7.50e-177	95.83	RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 P...	[more]
A0A6J1I0C1	3.54e-150	87.15	ribonuclease 3-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468279 PE=4 S...	[more]
A0A6J1GKQ4	8.31e-149	84.98	ribonuclease 3-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111455247 PE=4...	[more]
A0A6J1C375	1.25e-144	82.66	ribonuclease 3-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111007843 PE=...	[more]
A0A1Q3BNT8	1.05e-98	66.23	Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis O...	[more]

BLAST of MELO3C018835.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15417.1	9.7e-67	52.31	RNAse II-like 1	[more]
AT1G01040.1	8.8e-44	43.72	dicer-like 1	[more]
AT1G01040.2	8.8e-44	43.72	dicer-like 1	[more]
AT3G20420.1	3.1e-41	38.04	RNAse THREE-like protein 2	[more]
AT3G03300.1	5.9e-32	37.92	dicer-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 40..189 e-value: 7.4E-32 score: 121.8
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 60..166 e-value: 5.9E-22 score: 78.3
IPR000999	Ribonuclease III domain	PROSITE	PS00517	RNASE_3_1	coord: 60..68
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 25..167 score: 34.01506
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 40..185 e-value: 1.77653E-39 score: 131.966
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 16..187 e-value: 4.8E-48 score: 165.3
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 24..186
None	No IPR available	GENE3D	3.30.160.20		coord: 188..256 e-value: 3.2E-9 score: 38.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR14950:SF54	RNASE II-LIKE 1	coord: 19..255
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 19..255
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 149..252
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 193..252 e-value: 7.6E-5 score: 23.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018835.jh1.t1	MELO3C018835.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
molecular_function	GO:0004525	ribonuclease III activity