MELO3C018641 (gene) Melon (DHL92) v4

Overview
NameMELO3C018641
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 1715057 .. 1715683 (+)
RNA-Seq ExpressionMELO3C018641
SyntenyMELO3C018641
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAAGATGGCATTGCAGGGCGGCACCATGTGAGATAGAGAACCCATTCATCTATAGGGGGCAGCGGCGGCGTTGAAGTAGCTCATCGGAGCCTCCGAATAGAGAAACGGTTCAAATTCACAAATCTGAGGTTTGCTGCTATGGGTATTCAGATCGGTGATGACAAACGCATGGTTCTCGCAAGTCAATTAACTTTGGTCCATTGGGGTCACTACCAAGAGACAGATGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGGCGGCTGGAGAAGGTTAACGAAAGAGTGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAGAAACCGCCGTTATGGGTCGGGCTTGCTCGCCCTGAGGCTGACCCAATAACTCAAAAACCAAACTAAAGGAAAATTGTCCAAAATGACCTCTAACGTAAAAAAATTATTTACGATCGATATCTTCTTGAAAACTTGTTTTCTTATTTTTACCCTTTTTCACATATGAATACCAATTGTATTCTCTATTTTTTTTAACCTTAGACTAGCGCACTTGTTCGCTTACCATATTTGAACGATCGTTTGCACTCTTCTTTTCTTCTTATTATGTGACTATTGTTCTCGGTTTTCTC

mRNA sequence

GAGAAAGATGGCATTGCAGGGCGGCACCATGTGAGATAGAGAACCCATTCATCTATAGGGGGCAGCGGCGGCGTTGAAGTAGCTCATCGGAGCCTCCGAATAGAGAAACGGTTCAAATTCACAAATCTGAGGTTTGCTGCTATGGGTATTCAGATCGGTGATGACAAACGCATGGTTCTCGCAAGTCAATTAACTTTGGTCCATTGGGGTCACTACCAAGAGACAGATGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGGCGGCTGGAGAAGGTTAACGAAAGAGTGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAGAAACCGCCGTTATGGGTCGGGCTTGCTCGCCCTGAGGCTGACCCAATAACTCAAAAACCAAACTAAAGGAAAATTGTCCAAAATGACCTCTAACGTAAAAAAATTATTTACGATCGATATCTTCTTGAAAACTTGTTTTCTTATTTTTACCCTTTTTCACATATGAATACCAATTGTATTCTCTATTTTTTTTAACCTTAGACTAGCGCACTTGTTCGCTTACCATATTTGAACGATCGTTTGCACTCTTCTTTTCTTCTTATTATGTGACTATTGTTCTCGGTTTTCTC

Coding sequence (CDS)

ATGGGTATTCAGATCGGTGATGACAAACGCATGGTTCTCGCAAGTCAATTAACTTTGGTCCATTGGGGTCACTACCAAGAGACAGATGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGGCGGCTGGAGAAGGTTAACGAAAGAGTGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAGAAACCGCCGTTATGGGTCGGGCTTGCTCGCCCTGA

Protein sequence

MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVRVHEEEETAVMGRACSP
Homology
[Close]
BLAST of MELO3C018641 vs. NCBI nr
Match: KAA0031480.1 (hypothetical protein E6C27_scaffold139G002410 [Cucumis melo var. makuwa] >TYK06933.1 hypothetical protein E5676_scaffold13G002440 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR 60
          MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR
Sbjct: 1  MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR 60

Query: 61 VHEEEETAVMGRACSP 77
          VHEEEETAVMGRACSP
Sbjct: 61 VHEEEETAVMGRACSP 76

[Close]
BLAST of MELO3C018641 vs. NCBI nr
Match: KGN43719.1 (hypothetical protein Csa_017319 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 23 GHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVRVHEEEETAVMGRACS 76
          GHYQET+DNILQSCWTSPKWKTGRRLEKVNER CEGVRVHEEE+TA MGRACS
Sbjct: 9  GHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTA-MGRACS 60

[Close]
BLAST of MELO3C018641 vs. ExPASy TrEMBL
Match: A0A5A7SL79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002440 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.9e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR 60
          MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR
Sbjct: 1  MGIQIGDDKRMVLASQLTLVHWGHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVR 60

Query: 61 VHEEEETAVMGRACSP 77
          VHEEEETAVMGRACSP
Sbjct: 61 VHEEEETAVMGRACSP 76

[Close]
BLAST of MELO3C018641 vs. ExPASy TrEMBL
Match: A0A0A0K404 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062850 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-20
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 23 GHYQETDDNILQSCWTSPKWKTGRRLEKVNERVCEGVRVHEEEETAVMGRACS 76
          GHYQET+DNILQSCWTSPKWKTGRRLEKVNER CEGVRVHEEE+TA MGRACS
Sbjct: 9  GHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTA-MGRACS 60

The following BLAST results are available for this feature:
BLAST of MELO3C018641 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031480.11.6e-37100.00hypothetical protein E6C27_scaffold139G002410 [Cucumis melo var. makuwa] >TYK069... [more]
KGN43719.11.2e-1992.45hypothetical protein Csa_017319 [Cucumis sativus][more]
BLAST of MELO3C018641 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C018641 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SL797.9e-38100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K4045.7e-2092.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062850 PE=4 SV=1[more]
BLAST of MELO3C018641 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018641.1MELO3C018641.1mRNA