MELO3C018426 (gene) Melon (DHL92) v4

Overview


Name	MELO3C018426
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 184798 .. 185580 (-)
RNA-Seq Expression	MELO3C018426
Synteny	MELO3C018426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAGAGAAGAAGAAGAAGACGACGACTAACAACATTTCTCGAAAAAGAAAAAGAAAAAAAAGAACGACGCGGAAACTTGAGAGAAGCAGAGAAAATCGTTTCGAAATTTCTCGATCTCAAAGAAACTCGAATTCGAAAGCACCGATTTTTCCCGTTCTTCAATCCGGCGGAGATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTCGTGGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGGGTTCCGGTTCCTTTTGTCGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCGAAGTTAGTGTGAATTTTGTTTTTTTTTTTTTTTTAGTAATATTGTAATTGATCTCTTGGAAATAATCCAATTATCTTCTTTCTTTTAGTACGAAATTATTCTCTCTCTCTCTCTCTCTTTTGGATTAGTACGAAATTATGAAATTGTTATTTGGTTGTAATTTGTTGGTTTTATCGTCATTTTGACGCCGGACCTTCTGACCAACAATAATTCAGGAACTTGGAGTTGCACTTTAACTTAATTTATGTTCTTTCTTTTTCTTTTTATTTATTTATTCCTTTTTAAAAAGAAAAAGAAAAAAAAAAAGAAAATGTATGGACTGAATGTGTAAATATTGTAGAATTTTAGGGACGAGTTGTGAAATATAATCATTATTCAATGGCTCATGTG

mRNA sequence

GGCAGAGAAGAAGAAGAAGACGACGACTAACAACATTTCTCGAAAAAGAAAAAGAAAAAAAAGAACGACGCGGAAACTTGAGAGAAGCAGAGAAAATCGTTTCGAAATTTCTCGATCTCAAAGAAACTCGAATTCGAAAGCACCGATTTTTCCCGTTCTTCAATCCGGCGGAGATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTCGTGGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGGGTTCCGGTTCCTTTTGTCGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCGAAGTTAGTGTGAATTTTGTTTTTTTTTTTTTTTTAGTAATATTGTAATTGATCTCTTGGAAATAATCCAATTATCTTCTTTCTTTTAGTACGAAATTATTCTCTCTCTCTCTCTCTCTTTTGGATTAGTACGAAATTATGAAATTGTTATTTGGTTGTAATTTGTTGGTTTTATCGTCATTTTGACGCCGGACCTTCTGACCAACAATAATTCAGGAACTTGGAGTTGCACTTTAACTTAATTTATGTTCTTTCTTTTTCTTTTTATTTATTTATTCCTTTTTAAAAAGAAAAAGAAAAAAAAAAAGAAAATGTATGGACTGAATGTGTAAATATTGTAGAATTTTAGGGACGAGTTGTGAAATATAATCATTATTCAATGGCTCATGTG

Coding sequence (CDS)

CAGAGAAGAAGAAGAAGACGACGACTAACAACATTTCTCGAAAAAGAAAAAGAAAAAAAAGAACGACGCGGAAACTTGAGAGAAGCAGAGAAAATCGTTTCGAAATTTCTCGATCTCAAAGAAACTCGAATTCGAAAGCACCGATTTTTCCCGTTCTTCAATCCGGCGGAGATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTCGTGGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGGGTTCCGGTTCCTTTTGTCGGCTTTTACCCCTAA

Protein sequence

QRRRRRRRLTTFLEKEKEKKERRGNLREAEKIVSKFLDLKETRIRKHRFFPFFNPAEMGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP

Homology

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BLAST of MELO3C018426 vs. NCBI nr
Match: KAA0031272.1 (hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa] >KGN43958.1 hypothetical protein Csa_017301 [Cucumis sativus] >TYK06724.1 hypothetical protein E5676_scaffold13G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1   MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

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BLAST of MELO3C018426 vs. NCBI nr
Match: XP_015874275.1 (uncharacterized protein LOC107411246 [Ziziphus jujuba])

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-08
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1   MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

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BLAST of MELO3C018426 vs. NCBI nr
Match: OAY29431.1 (hypothetical protein MANES_15G144200v8 [Manihot esculenta])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           M  QRLE+C++L+R+A+ FV +VAE++G VI ++   + +PT    VPVPFVGF P
Sbjct: 1   MMFQRLEMCIQLIRLALEFVFIVAEAIGIVIEQDSSHRYIPTQTFAVPVPFVGFLP 56

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BLAST of MELO3C018426 vs. NCBI nr
Match: KAB2042822.1 (hypothetical protein ES319_D02G244200v1 [Gossypium barbadense] >KAG4160081.1 hypothetical protein ERO13_D02G211700v2 [Gossypium hirsutum] >TYG80995.1 hypothetical protein ES288_D02G261900v1 [Gossypium darwinii] >TYH85421.1 hypothetical protein ES332_D02G265400v1 [Gossypium tomentosum] >TYI95055.1 hypothetical protein E1A91_D02G250500v1 [Gossypium mustelinum])

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 114
           M +QRLE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1   MVLQRLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

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BLAST of MELO3C018426 vs. NCBI nr
Match: XP_021286324.1 (uncharacterized protein LOC110418034 [Herrania umbratica])

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-05
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 60  IQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGR----VPVPFVGFYP 114
           +QRLE+C+ELL++AI FV+VVAE+VG VIH   Q    P   GR     PVPFVGF P
Sbjct: 38  LQRLEICVELLKLAIEFVMVVAEAVGVVIH---QNDRAPVLTGRRSFAAPVPFVGFLP 92

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BLAST of MELO3C018426 vs. ExPASy TrEMBL
Match: A0A5D3C626 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00250 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.2e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1   MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

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BLAST of MELO3C018426 vs. ExPASy TrEMBL
Match: A0A0A0K3A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074910 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.2e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1   MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

[Close]

BLAST of MELO3C018426 vs. ExPASy TrEMBL
Match: A0A6P3ZHL2 (uncharacterized protein LOC107411246 OS=Ziziphus jujuba OX=326968 GN=LOC107411246 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1   MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

[Close]

BLAST of MELO3C018426 vs. ExPASy TrEMBL
Match: A0A2C9UG64 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G144200 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 114
           M  QRLE+C++L+R+A+ FV +VAE++G VI ++   + +PT    VPVPFVGF P
Sbjct: 1   MMFQRLEMCIQLIRLALEFVFIVAEAIGIVIEQDSSHRYIPTQTFAVPVPFVGFLP 56

[Close]

BLAST of MELO3C018426 vs. ExPASy TrEMBL
Match: A0A5D2M247 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G265400v1 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.1e-06
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 58  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 114
           M +QRLE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1   MVLQRLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

[Close]

BLAST of MELO3C018426 vs. TAIR 10
Match: AT3G19030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxine biosynthetic process, homoserine biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 61  QRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTA-GGR------VPVPFVGF 112
           Q+LE+C+EL+++A+ FV  VAESV +   +   P +LP   GGR      VP+P VGF
Sbjct: 4   QKLEICIELVKIAVVFVTTVAESVEEAFRK--PPPSLPAVHGGRRNNYAAVPIPLVGF 59

The following BLAST results are available for this feature:

BLAST of MELO3C018426 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031272.1	1.7e-22	100.00	hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa] >KGN4395...	[more]
XP_015874275.1	2.4e-08	55.36	uncharacterized protein LOC107411246 [Ziziphus jujuba]	[more]
OAY29431.1	2.2e-06	50.00	hypothetical protein MANES_15G144200v8 [Manihot esculenta]	[more]
KAB2042822.1	1.9e-05	50.88	hypothetical protein ES319_D02G244200v1 [Gossypium barbadense] >KAG4160081.1 hyp...	[more]
XP_021286324.1	3.2e-05	56.90	uncharacterized protein LOC110418034 [Herrania umbratica]	[more]

BLAST of MELO3C018426 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C018426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C626	8.2e-23	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K3A1	8.2e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074910 PE=4 SV=1	[more]
A0A6P3ZHL2	1.2e-08	55.36	uncharacterized protein LOC107411246 OS=Ziziphus jujuba OX=326968 GN=LOC10741124...	[more]
A0A2C9UG64	1.1e-06	50.00	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G144200 PE=4 SV=...	[more]
A0A5D2M247	9.1e-06	50.88	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G265400v1 P...	[more]

BLAST of MELO3C018426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19030.1	2.0e-05	44.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxi...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37705	BNAA08G11710D PROTEIN	coord: 58..113
None	No IPR available	PANTHER	PTHR37705:SF1	BNAA08G11710D PROTEIN	coord: 58..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018426.1	MELO3C018426.1	mRNA