MELO3C018318 (gene) Melon (DHL92) v4

Overview
NameMELO3C018318
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 6089245 .. 6089423 (-)
RNA-Seq ExpressionMELO3C018318
SyntenyMELO3C018318
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTATGA

mRNA sequence

TGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTATGA

Coding sequence (CDS)

ATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTAT

Protein sequence

MKTSTVTPYVGHAVRTMLQMNFGFAVISMRNGSMGSLLY
Homology
[Close]
BLAST of MELO3C018318 vs. NCBI nr
Match: TYK10342.1 (uncharacterized protein E5676_scaffold367G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MKTSTVTPYVGHAVRTMLQMNFGFAVISMRNGSMGSLLY 40
          MKTSTVTPYVGH VRT+LQMNFGFAVISMRNGSMG+LLY
Sbjct: 17 MKTSTVTPYVGHVVRTVLQMNFGFAVISMRNGSMGNLLY 55

[Close]
BLAST of MELO3C018318 vs. NCBI nr
Match: KAA0058974.1 (hypothetical protein E6C27_scaffold98G001610 [Cucumis melo var. makuwa] >TYK11007.1 hypothetical protein E5676_scaffold874G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.6e-10
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  MKTSTVTPYVGHAVRTMLQMNFGFAVISMRNGSMGSLL 39
          MKTSTVTPYVGHAVRTMLQMNFGFAVIS+RNGSMG+LL
Sbjct: 27 MKTSTVTPYVGHAVRTMLQMNFGFAVISVRNGSMGNLL 64

[Close]
BLAST of MELO3C018318 vs. ExPASy TrEMBL
Match: A0A5D3CGG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00170 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-11
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MKTSTVTPYVGHAVRTMLQMNFGFAVISMRNGSMGSLLY 40
          MKTSTVTPYVGH VRT+LQMNFGFAVISMRNGSMG+LLY
Sbjct: 17 MKTSTVTPYVGHVVRTVLQMNFGFAVISMRNGSMGNLLY 55

[Close]
BLAST of MELO3C018318 vs. ExPASy TrEMBL
Match: A0A5A7UV27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00450 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-10
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  MKTSTVTPYVGHAVRTMLQMNFGFAVISMRNGSMGSLL 39
          MKTSTVTPYVGHAVRTMLQMNFGFAVIS+RNGSMG+LL
Sbjct: 27 MKTSTVTPYVGHAVRTMLQMNFGFAVISVRNGSMGNLL 64

The following BLAST results are available for this feature:
BLAST of MELO3C018318 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C018318 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10342.11.1e-1092.31uncharacterized protein E5676_scaffold367G00170 [Cucumis melo var. makuwa][more]
KAA0058974.12.6e-1094.74hypothetical protein E6C27_scaffold98G001610 [Cucumis melo var. makuwa] >TYK1100... [more]
BLAST of MELO3C018318 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CGG95.6e-1192.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UV271.2e-1094.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C018318 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018318.1MELO3C018318.1mRNA