MELO3C018233 (gene) Melon (DHL92) v4

Overview


Name	MELO3C018233
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 7816567 .. 7816785 (+)
RNA-Seq Expression	MELO3C018233
Synteny	MELO3C018233

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGAAGACCTTTAGAGCATTGTTTGAGAAGAGGCGAGCTGAGAATGTGAAAAGAAAGCCCAAAAAAAATGAAGGGGAAGAGGGCAAGGAAAATGAATTAGAAGGACCACTCTCCTCTTCTCAAGTTAACAACAGTTCCAGGGTTCCTCGCGGCACCCATCCAACTGTTCAAATGGAAGAGCTTTTTCCAAGGGGTGATCGTAATAAGATCTGA

mRNA sequence

ATGAAAAAGAAGACCTTTAGAGCATTGTTTGAGAAGAGGCGAGCTGAGAATGTGAAAAGAAAGCCCAAAAAAAATGAAGGGGAAGAGGGCAAGGAAAATGAATTAGAAGGACCACTCTCCTCTTCTCAAGTTAACAACAGTTCCAGGGTTCCTCGCGGCACCCATCCAACTGTTCAAATGGAAGAGCTTTTTCCAAGGGGTGATCGTAATAAGATCTGA

Coding sequence (CDS)

ATGAAAAAGAAGACCTTTAGAGCATTGTTTGAGAAGAGGCGAGCTGAGAATGTGAAAAGAAAGCCCAAAAAAAATGAAGGGGAAGAGGGCAAGGAAAATGAATTAGAAGGACCACTCTCCTCTTCTCAAGTTAACAACAGTTCCAGGGTTCCTCGCGGCACCCATCCAACTGTTCAAATGGAAGAGCTTTTTCCAAGGGGTGATCGTAATAAGATCTGA

Protein sequence

MKKKTFRALFEKRRAENVKRKPKKNEGEEGKENELEGPLSSSQVNNSSRVPRGTHPTVQMEELFPRGDRNKI

Homology

[Close]

BLAST of MELO3C018233 vs. NCBI nr
Match: TYJ99631.1 (hypothetical protein E5676_scaffold562G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 5.1e-04
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1  MKKKTFRALFEKRRAENVKRKPKKNEGEEGKENELEGPLSSSQVNNSSRVPRGTHP 57
          MKKKT +A FEK RAE  KRKP+ N+ EEG+E++  GPLSS +V+    + +G +P
Sbjct: 1  MKKKTLKAQFEKTRAEKAKRKPQNNDAEEGEESDSNGPLSSIRVSKQFMIEKGLYP 56

[Close]

BLAST of MELO3C018233 vs. ExPASy TrEMBL
Match: A0A5D3BLM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00010 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1  MKKKTFRALFEKRRAENVKRKPKKNEGEEGKENELEGPLSSSQVNNSSRVPRGTHP 57
          MKKKT +A FEK RAE  KRKP+ N+ EEG+E++  GPLSS +V+    + +G +P
Sbjct: 1  MKKKTLKAQFEKTRAEKAKRKPQNNDAEEGEESDSNGPLSSIRVSKQFMIEKGLYP 56

The following BLAST results are available for this feature:

BLAST of MELO3C018233 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99631.1	5.1e-04	51.79	hypothetical protein E5676_scaffold562G00010 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C018233 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C018233 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLM8	2.4e-04	51.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C018233 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018233.1	MELO3C018233.1	mRNA