MELO3C018108.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C018108.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein MNN4-like
Locationchr04: 10336904 .. 10337125 (-)
RNA-Seq ExpressionMELO3C018108.jh1
SyntenyMELO3C018108.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACAAGCATTGCAAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGATGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAATAGCGCAATTT

mRNA sequence

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACAAGCATTGCAAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGATGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAATAGCGCAATTT

Coding sequence (CDS)

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACAAGCATTGCAAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGATGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAATAGCGCAATTT

Protein sequence

MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKKRKVAMKKKTLIAQF
Homology
BLAST of MELO3C018108.jh1 vs. NCBI nr
Match: KAA0046474.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 5.37e-37
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKK 60
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFD+HC+EFKKEIEELSPL+DEMVRPAKK
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60

Query: 61 RKVAMKKKTLIAQF 74
          RKVAMKKKTL AQF
Sbjct: 61 RKVAMKKKTLRAQF 74

BLAST of MELO3C018108.jh1 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.59e-22
Identity = 51/54 (94.44%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEM 54
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFD+HC+EFKKEIEELSPL+DEM
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 54

BLAST of MELO3C018108.jh1 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 1.33e-15
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMV-RPAKK 61
           KE KLR+ ++LL++V+K+ALSVEKGK+KE  F++  KEF+KEI+E SPL D +V RPAKK
Sbjct: 42  KEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKK 101

Query: 62  RKVAMKKKTLIAQF 74
           R V MKKK L  QF
Sbjct: 102 RNVTMKKKVLRDQF 115

BLAST of MELO3C018108.jh1 vs. NCBI nr
Match: KAE8637518.1 (hypothetical protein CSA_004751 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.90e-14
Identity = 41/73 (56.16%), Postives = 59/73 (80.82%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKKR 61
           KETKL+E K+LL++VEKV LSV+KGK K+ + +++ KE +KE+E+ SPL DE+ +P+KK+
Sbjct: 61  KETKLKERKELLNKVEKVTLSVKKGKAKKTHSEEYDKEMEKELEDESPLDDEVAKPSKKK 120

Query: 62  KVAMKKKTLIAQF 74
           KV +KKK L  QF
Sbjct: 121 KVTIKKKVLNMQF 133

BLAST of MELO3C018108.jh1 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.26e-14
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKKR 61
           KE +LRE ++LL +VEKVA+  EKGK +E  F++H +EF+KEI EL PL D+ +RPA KR
Sbjct: 72  KEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKR 131

Query: 62  KVAMKKKTLIAQF 74
           K+ MKKK L  +F
Sbjct: 132 KIMMKKKALREKF 144

BLAST of MELO3C018108.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TTT3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00540 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.60e-37
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKK 60
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFD+HC+EFKKEIEELSPL+DEMVRPAKK
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60

Query: 61 RKVAMKKKTLIAQF 74
          RKVAMKKKTL AQF
Sbjct: 61 RKVAMKKKTLRAQF 74

BLAST of MELO3C018108.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 7.69e-23
Identity = 51/54 (94.44%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEM 54
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFD+HC+EFKKEIEELSPL+DEM
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 54

BLAST of MELO3C018108.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.44e-16
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMV-RPAKK 61
           KE KLR+ ++LL++V+K+ALSVEKGK+KE  F++  KEF+KEI+E SPL D +V RPAKK
Sbjct: 42  KEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKK 101

Query: 62  RKVAMKKKTLIAQF 74
           R V MKKK L  QF
Sbjct: 102 RNVTMKKKVLRDQF 115

BLAST of MELO3C018108.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C2J1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00380 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.09e-14
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKKR 61
           KE +LRE ++LL +VEKVA+  EKGK +E  F++H +EF+KEI EL PL D+ +RPA KR
Sbjct: 72  KEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKR 131

Query: 62  KVAMKKKTLIAQF 74
           K+ MKKK L  +F
Sbjct: 132 KIMMKKKALREKF 144

BLAST of MELO3C018108.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.75e-14
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDKHCKEFKKEIEELSPLMDEMVRPAKKR 61
           KETKLRE ++LL +V+ VALS EK K +E NF+ H +EF+KEI++L PL ++++RPAKKR
Sbjct: 200 KETKLREREELLGKVDNVALSAEKDKCEEKNFEVHYEEFEKEIDKLCPLEEKVIRPAKKR 259

Query: 62  KVAMKKKTLIAQF 74
              MKKK L  QF
Sbjct: 260 TFTMKKKALRKQF 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046474.15.37e-3794.59protein MNN4-like [Cucumis melo var. makuwa][more]
TYJ97737.11.59e-2294.44protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0041276.11.33e-1562.16protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... [more]
KAE8637518.11.90e-1456.16hypothetical protein CSA_004751 [Cucumis sativus][more]
KAA0066500.12.26e-1456.16protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TTT32.60e-3794.59Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00... [more]
A0A5D3BF327.69e-2394.44Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
A0A5A7TGV46.44e-1662.16Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... [more]
A0A5D3C2J11.09e-1456.16Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00... [more]
A0A5A7SUZ43.75e-1457.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018108.jh1.t1MELO3C018108.jh1.t1mRNA