Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCACACAAATACCTCAACGGCGCAAACCAAATGTCACGTCGTGAAGCTCGGGAATCCGATTCCAAGCGCCACCGTTCCCGATTTGATAGAGAACCCAGGTACCCTCTTCTCTTTTTCTCTGATTGCATCCCCTTGTCTCTAAGTTTACTGACTTATTACCACTTTGTTCACTTTAAATGGATTGTTATTGCGTTACCACTGCCGGAGTTTTGCTCCAGTATAATTTGTTGATGATGATTGTTTTGATGTCATCGTAATCGGGATGGTTGAACAGTGTTCATTAAGTGAACATTGTTTGAAAAGTAAAGTCGTTCAATTTGACTGTCGGTTTGTTATATAGTTGGTTGATGTGGTATATGTTTACATGGGTCTCGAGGAATTAGCAATTTTATGAAGCTTCTGGTTTGGGAGGACGAATAGTGAATTACTAATTCCTTCTTAATGAGGGTTGGAGTGTCTTTCAGCTCTTGGTTCACTGTTTTCTCACTATGGTGTGAGAGTTTCTTTTTAAAAATTTGTAACTTTTAGCTATAAATAGTATCCGTTCGTTAGTTCTTTTTGTTTGTCAGGACGATAGTTCATGGAGTTTTTTTTTTTTTTTGAAGATGAAACTATGTACTATAAGTTCCCATCTTATGTTGATTGGACCCTCTTTGAGCCCTTGTTCCATTATGTTTCGCTAATGACGTGAGAGACATTTATAAAAAACTCTGAATTTGAGATAGAAAATTTTATTTGCAAGCGTAATGTTTGTTCTTAGCTAGGAAACATGGACACATGGGGATACGTTTGGACAAGTGATGGACATGTCTTTGACACACCAAATCTACGATCCTAATTTTTATTTTTTTTCTTTGGTAATTTCAGTCATGTCCAAATACAGTTGTATCCAACCGGAGATAGAAGCACCCCACTTTTTATTGTTTATTTTGCTGAAAGGAAGAGAATAGAAAGACACCACTTATATCAAATCACACACATCTACTTTCCATTAGGCATAGGCAAATGACAAGCCTAATTTCTATCTAAAACATTTCTTCCTTTGAGATTGCAGATAGAGGGAGGAATCAAGTGCCTCCACCCTAGAAAGAGTTGATGAAATAAATAGAGGGATAGTTGCTTTTGTTTGGTTAAAATTGTGCACATAGAAACAGAGAAAATCAAGTTAGTTTCCATAAATTCTTCAAAACAACTGGTTTAAGGAGAGTAGAGAATTTCTTTGACTGGAATTGTAACAGAGAATCGAAGGAGAGAGATGACAAATACAGGGAGGTTTATTTCCTCTCCCTCTCTAAACAAATTGACTTATATCCCACACCAAACTAAAACAATTGAAGAAACATTATTATTATTATTCTAATTTTTTTAACAGAACACAACATATATATGTATATATATTTAATTCTTTTATTTTTAATCAAAATATAACTTTCTTCTTGATTATTTGATATATTCTTTGACTCACATTATTTAAATTAAAATGTTAGGATGATTTCTTCTTCATTTAGCGAGAATGGATCAACTCCTATTTATTCGGTTGCTTTGTAATGTTGAAGATGAATTTAAGCCACTATGGAAATATGTCCCCAAGCATCACAAGTTGAGTGATGGGGTTATACAAGAGTTAGGGCTCACTTCTTAAAGATAAGTGGTCTAGGAGTTAGAGTGTGCCCGTAAGTCACTCTTAAAGATGTTGCTGATATGCAACAAGATGACTCCATTCTTTATCGTCTAATTGAATCAAAATAATATTTAAGATAGAATAAGTAATCCATGCATTTATTATGCGATGTTTAATCATGGAACTCTAATATGGCATAAATACGTGATGCATTGTTACTAGTCCCAAGAGGTCAAAGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCTTGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTTCGTCTTGTGGGGCAAGACATGATACCGCATGAGTCTTCATTAGCACTTGAGTCTAAACCAGAAGGTGGAGCTGGCACAGGAGCAAACAGGAACAGTGATGGGAGAGATGGAGGGACTAAACATTCAGTGAATCCCAATGAAGTGCCACGATCAAGATCTTATTTTCAGGTTTGTGCTACATTGAAGATTTCTTCCAATTAATCTTGCTATTTTCTTTCTTATTTTGTTTTTGGAAACTAACATGACTTCAGTTTGGGTTGTTCTTGTCCACTATTTATCCAAATTTCATGGCTTGATCTCAAGAATTATTGGCAGAATCTTAAAGGTCATTATTGATATGCTTTTCCATTCTTTAATCTGTCATCTCAATCCCAACTTAGTATCAGATTTTTTTTTTTTATATTTTTTACTTATACCGTGTTTGATAAAAAATAAGGCTGGAAGCTTCAAATGTTTTGTGTTTTTATTTTGAATCTAGCTGTAATTTAAATATTCACAGCTTTTCATATGAACCATCGAGTCCCTGCAAGATATGGGCATAAAAATTCTCTGACTGGGTCTACCTGGAGCTAGTGTTTTATCCTTGCAGATATAAATGAATCCGTATGAGGATTTCCTTTGAATTTCACTAAATTTATAGTCTACTTAATATTTCATTTAACGATGTAGGATACAATACTAGGTATGGACCGTAGTCAATGTTTTCTTGAAATGAAACGAGAGATTTTTTTTTTCTTTGAAGAGATTGTTAAAGTAGGCATCTCAGCCAGAGCATTTTCTTCCTTGATAAAATAACTTAATAGAGATTAAGGCATGCAATTTCAGGTGGGTCACCTCAGTGAGGTGCAAGGTAAGGTGCTCCAGCGACACTCTCACTTTCAAAGTATGTTGTGACATGGTTTTATGGCTTATGAAGGGCACGTTTGTTGGGTCAAACATATATTTCTATTTTCTTTGAGATCTTAATTTAGATAGCTGTGGAATTTCATCATCAATATTGGTAAATTAAATTGCTCGGCTCAGTAATAGTTCTCTCCACTTCTCTGCATTTCTTGCTCCTCCCTTCTCCTTTTTCGATTCTTTGTTGCAACTGAGATTACCCAACATTTTGCTGGGCTGATGTAATTGGAATCTTGTTCAGCCCTGCCTTCGAGTGCATCCGTGTATATAACTTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGATGAACGCAGTAATGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTACAACTAGTGGTGGGTTTCGTTACTTCCTTTTAAGCCATAATTCCAACTTTTTTTGAGTTCTCTTATTTTTCTCTTGTGCAACGCCATGATGTTTTAGTCTACTCTTTGTAACATCACTAATCATAACTATTATGCATGTATTATTAAAGTTATTATTCATATGATTATTATAATTATTTTGACTTTCATAAATATTATTCTAAATGTTTGGAGCAACTATAGATATTATATTTTTGTAGCTTAATGGGACCAGATCTACTTTTGGATATTTTCTAATTACTGTTCTACCTATGGCTATGTATTGGTGTAAATGGCTTCCTCTCCTTAATAATTACAGTGTTGTGACTTCTTTGCAACTCCATTTTGGGATCTCAGATGTATCTCCATCCTCTTTCATATTATGAATAAAATATCCTTCTGAAAAAAAAGAAAGAAACTATTGTTTCTGTAGTAAATGCATGTGCCTGTTTCTGTAGTAAATCATTGGTAATGAAGGCATTGACATGTCAACGTTTCAACATACAATCTTCCAGAGATCATGTTCTTATTTAAGAATAGTCTTGCATGAGAAAATTTAGAGTATCTGTTCAACCTTTCCATTCTTGATTCTCTAATGATTTTGTATCTGGTTTTGCCTTGTTTTTCCCTCTTAGAGCGTGGTTGGTGGAAGGATTCAAAGGATCCAGATAAGGATATTGATAGGAAGACAATAACTTATAAGTCACAGCAAAGAGATGAGAAATCACAAGCTGCGAGAGAGGATAGGCACCATGAAGGGTCGTCGAAACTGGAGGTTGATGCACTTACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACAGTAGACAATGAAGATGGTGAGAAAGTGGCAATGGTACCAGAGAGTAAGAAATCAAGTGATATGCACCAGATTCAGGAGGGAAGGGAACGAAGAGAAGAAAGAGGCCGCGACACCCGCTATTCTGAAAAACTTAATAATAAGCATGCCAATGGAGACATGGCTTCCAAAAGGGATGAAATGAAGAGAGTCGGCTATCCAGTGAGAGAAAGATATGGCAATGGAAGTGGTGGTGGAAATTACAGGGGAAGGGACAGATTCGGTGGGCGGCAAGGATATCGAACCAGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAAGCTAACCGGAGTCCAACCCCAAAGAATGAAGAGGATCAAATTGCCAAGGTTGAAGCTCTTCTTTCTTCGTAGATTGGAATTGGCCAACGATGCCATCTGATTTTATTGAGTCTTTAGTGAATACGCATTTGACAAAAATATTCTCAAGCCTAGTGCATTTGAAATGACGTAGCTTTTGTTATGTTTTTCTATGACATCATCTCCTTTTTGTTCTCTTGCTTCTTGTTTGGTACATCTCAATGTAATTGAATTGCCGTATTCTACAACCCAAATTAGTATTTCATTAGAACGTTGGTTGACTTTGAGTTCACTGTTCTTTCATGTGCAAGGCTCATTTCCATTGGGCAGTTGGAAAACTAGCCTGGAAAGATGTTATTAGGCTTGAAGAACACAATATTACATCTTTTGACAGTTCACATAAA
mRNA sequence
TTCACACAAATACCTCAACGGCGCAAACCAAATGTCACGTCGTGAAGCTCGGGAATCCGATTCCAAGCGCCACCGTTCCCGATTTGATAGAGAACCCAGTCCCAAGAGGTCAAAGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCTTGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTTCGTCTTGTGGGGCAAGACATGATACCGCATGAGTCTTCATTAGCACTTGAGTCTAAACCAGAAGGTGGAGCTGGCACAGGAGCAAACAGGAACAGTGATGGGAGAGATGGAGGGACTAAACATTCAGTGAATCCCAATGAAGTGCCACGATCAAGATCTTATTTTCAGCACGATGAACGCAGTAATGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTACAACTAGTGAGCGTGGTTGGTGGAAGGATTCAAAGGATCCAGATAAGGATATTGATAGGAAGACAATAACTTATAAGTCACAGCAAAGAGATGAGAAATCACAAGCTGCGAGAGAGGATAGGCACCATGAAGGGTCGTCGAAACTGGAGGTTGATGCACTTACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACAGTAGACAATGAAGATGGTGAGAAAGTGGCAATGGTACCAGAGAGTAAGAAATCAAGTGATATGCACCAGATTCAGGAGGGAAGGGAACGAAGAGAAGAAAGAGGCCGCGACACCCGCTATTCTGAAAAACTTAATAATAAGCATGCCAATGGAGACATGGCTTCCAAAAGGGATGAAATGAAGAGAGTCGGCTATCCAGTGAGAGAAAGATATGGCAATGGAAGTGGTGGTGGAAATTACAGGGGAAGGGACAGATTCGGTGGGCGGCAAGGATATCGAACCAGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAAGCTAACCGGAGTCCAACCCCAAAGAATGAAGAGGATCAAATTGCCAAGGTTGAAGCTCTTCTTTCTTCGTAGATTGGAATTGGCCAACGATGCCATCTGATTTTATTGAGTCTTTAGTGAATACGCATTTGACAAAAATATTCTCAAGCCTAGTGCATTTGAAATGACGTAGCTTTTGTTATGTTTTTCTATGACATCATCTCCTTTTTGTTCTCTTGCTTCTTGTTTGGTACATCTCAATGTAATTGAATTGCCGTATTCTACAACCCAAATTAGTATTTCATTAGAACGTTGGTTGACTTTGAGTTCACTGTTCTTTCATGTGCAAGGCTCATTTCCATTGGGCAGTTGGAAAACTAGCCTGGAAAGATGTTATTAGGCTTGAAGAACACAATATTACATCTTTTGACAGTTCACATAAA
Coding sequence (CDS)
ATGTCACGTCGTGAAGCTCGGGAATCCGATTCCAAGCGCCACCGTTCCCGATTTGATAGAGAACCCAGTCCCAAGAGGTCAAAGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCTTGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTTCGTCTTGTGGGGCAAGACATGATACCGCATGAGTCTTCATTAGCACTTGAGTCTAAACCAGAAGGTGGAGCTGGCACAGGAGCAAACAGGAACAGTGATGGGAGAGATGGAGGGACTAAACATTCAGTGAATCCCAATGAAGTGCCACGATCAAGATCTTATTTTCAGCACGATGAACGCAGTAATGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTACAACTAGTGAGCGTGGTTGGTGGAAGGATTCAAAGGATCCAGATAAGGATATTGATAGGAAGACAATAACTTATAAGTCACAGCAAAGAGATGAGAAATCACAAGCTGCGAGAGAGGATAGGCACCATGAAGGGTCGTCGAAACTGGAGGTTGATGCACTTACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACAGTAGACAATGAAGATGGTGAGAAAGTGGCAATGGTACCAGAGAGTAAGAAATCAAGTGATATGCACCAGATTCAGGAGGGAAGGGAACGAAGAGAAGAAAGAGGCCGCGACACCCGCTATTCTGAAAAACTTAATAATAAGCATGCCAATGGAGACATGGCTTCCAAAAGGGATGAAATGAAGAGAGTCGGCTATCCAGTGAGAGAAAGATATGGCAATGGAAGTGGTGGTGGAAATTACAGGGGAAGGGACAGATTCGGTGGGCGGCAAGGATATCGAACCAGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAAGCTAACCGGAGTCCAACCCCAAAGAATGAAGAGGATCAAATTGCCAAGGTTGAAGCTCTTCTTTCTTCGTAG
Protein sequence
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Homology
BLAST of MELO3C018010.jh1 vs. NCBI nr
Match:
XP_008454399.1 (PREDICTED: uncharacterized protein LOC103494816 [Cucumis melo])
HSP 1 Score: 628 bits (1620), Expect = 1.94e-226
Identity = 329/332 (99.10%), Postives = 330/332 (99.40%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL
Sbjct: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
VGQDMIPHESSLALESKPEGGAGTGANR+SDGRDGGTKHSVNPNEVPRSRSYFQHDERSN
Sbjct: 61 VGQDMIPHESSLALESKPEGGAGTGANRSSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKL 180
AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEK QAAREDRHHEGSSKL
Sbjct: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEKPQAAREDRHHEGSSKL 180
Query: 181 EVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY 240
EVD LTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY
Sbjct: 181 EVDTLTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY 240
Query: 241 SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE 300
SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE
Sbjct: 241 SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE 300
Query: 301 KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Sbjct: 301 KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
BLAST of MELO3C018010.jh1 vs. NCBI nr
Match:
XP_004152279.1 (uncharacterized protein LOC101213709 [Cucumis sativus] >KGN52754.1 hypothetical protein Csa_015080 [Cucumis sativus])
HSP 1 Score: 604 bits (1557), Expect = 8.65e-217
Identity = 318/335 (94.93%), Postives = 325/335 (97.01%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRL
Sbjct: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
VGQDMIPHESSLALESKPEGGAG GANRNSDGRDGGTKHSVNP EVPRSRSYFQHDERSN
Sbjct: 61 VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDR---KTITYKSQQRDEKSQAAREDRHHEGS 180
AGQVGRSFGRS TSERGWWKDSKDPDKD DR K++TYKSQQRDEK QAAREDRHH+GS
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGS 180
Query: 181 SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRD 240
SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+D+HQIQEGRERREERGRD
Sbjct: 181 SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRD 240
Query: 241 TRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT 300
RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Sbjct: 241 PRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT 300
Query: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Sbjct: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 335
BLAST of MELO3C018010.jh1 vs. NCBI nr
Match:
KAA0044330.1 (rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 597 bits (1540), Expect = 2.37e-213
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 23 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 82
SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA
Sbjct: 79 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 138
Query: 83 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 142
GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS
Sbjct: 139 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 198
Query: 143 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 202
KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD
Sbjct: 199 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 258
Query: 203 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 262
NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR
Sbjct: 259 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 318
Query: 263 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 322
VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ
Sbjct: 319 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 378
Query: 323 IAKVEALLSS 332
IAKVEALLSS
Sbjct: 379 IAKVEALLSS 388
BLAST of MELO3C018010.jh1 vs. NCBI nr
Match:
TYK29459.1 (rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 592 bits (1526), Expect = 3.22e-211
Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0
Query: 23 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 82
SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA
Sbjct: 79 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 138
Query: 83 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 142
GTGANR+SDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS
Sbjct: 139 GTGANRSSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 198
Query: 143 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 202
KDPDKDIDRKTITYKSQQRDEK QAAREDRHHEGSSKLEVD LTPARKRPAFREKKITVD
Sbjct: 199 KDPDKDIDRKTITYKSQQRDEKPQAAREDRHHEGSSKLEVDTLTPARKRPAFREKKITVD 258
Query: 203 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 262
NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR
Sbjct: 259 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 318
Query: 263 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 322
VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ
Sbjct: 319 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 378
Query: 323 IAKVEALLSS 332
IAKVEALLSS
Sbjct: 379 IAKVEALLSS 388
BLAST of MELO3C018010.jh1 vs. NCBI nr
Match:
XP_038903819.1 (uncharacterized protein LOC120090316 [Benincasa hispida])
HSP 1 Score: 548 bits (1411), Expect = 1.46e-194
Identity = 293/335 (87.46%), Postives = 303/335 (90.45%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRRE RESDSKRHRSRFDREPSPKRS+RDRKTLEEKLSRNSSS VEDNKDRDQKHELR
Sbjct: 1 MSRREVRESDSKRHRSRFDREPSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHELRH 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
VGQDM+PHESSLALESK EG G GA RNSDGRDGGTKHSVNP EVPRSRSYFQHDER N
Sbjct: 61 VGQDMMPHESSLALESKLEGEVGKGAKRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERGN 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDR---KTITYKSQQRDEKSQAAREDRHHEGS 180
AGQVGRSFG++ TSER WWKDSKDPDKD DR KT Y SQQRDEK QAAREDRHH+GS
Sbjct: 121 AGQVGRSFGQTATSERSWWKDSKDPDKDNDRASGKTTAYNSQQRDEKPQAAREDRHHDGS 180
Query: 181 SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRD 240
SKLEVDAL PARKRPAFREKKITV NE+GEK AMVPESKKSSD+HQ QEGRERREERGRD
Sbjct: 181 SKLEVDALAPARKRPAFREKKITVGNENGEKAAMVPESKKSSDLHQPQEGRERREERGRD 240
Query: 241 TRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT 300
T YSEKLN KH NGDM ++RDEMKR GYP RERYGNGSGGGNYRGRDRF GRQGYR SGT
Sbjct: 241 TSYSEKLN-KHVNGDMTTRRDEMKRGGYPARERYGNGSGGGNYRGRDRFSGRQGYRASGT 300
Query: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLS+
Sbjct: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLST 334
BLAST of MELO3C018010.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3BY17 (uncharacterized protein LOC103494816 OS=Cucumis melo OX=3656 GN=LOC103494816 PE=4 SV=1)
HSP 1 Score: 628 bits (1620), Expect = 9.38e-227
Identity = 329/332 (99.10%), Postives = 330/332 (99.40%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL
Sbjct: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
VGQDMIPHESSLALESKPEGGAGTGANR+SDGRDGGTKHSVNPNEVPRSRSYFQHDERSN
Sbjct: 61 VGQDMIPHESSLALESKPEGGAGTGANRSSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKL 180
AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEK QAAREDRHHEGSSKL
Sbjct: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQRDEKPQAAREDRHHEGSSKL 180
Query: 181 EVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY 240
EVD LTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY
Sbjct: 181 EVDTLTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY 240
Query: 241 SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE 300
SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE
Sbjct: 241 SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVE 300
Query: 301 KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Sbjct: 301 KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
BLAST of MELO3C018010.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0KV12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)
HSP 1 Score: 604 bits (1557), Expect = 4.19e-217
Identity = 318/335 (94.93%), Postives = 325/335 (97.01%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRL
Sbjct: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
VGQDMIPHESSLALESKPEGGAG GANRNSDGRDGGTKHSVNP EVPRSRSYFQHDERSN
Sbjct: 61 VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDR---KTITYKSQQRDEKSQAAREDRHHEGS 180
AGQVGRSFGRS TSERGWWKDSKDPDKD DR K++TYKSQQRDEK QAAREDRHH+GS
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGS 180
Query: 181 SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRD 240
SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+D+HQIQEGRERREERGRD
Sbjct: 181 SKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRD 240
Query: 241 TRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT 300
RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Sbjct: 241 PRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT 300
Query: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Sbjct: 301 RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 335
BLAST of MELO3C018010.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7TM88 (rRNA biogenesis protein RRP36-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00520 PE=4 SV=1)
HSP 1 Score: 597 bits (1540), Expect = 1.15e-213
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 23 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 82
SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA
Sbjct: 79 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 138
Query: 83 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 142
GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS
Sbjct: 139 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 198
Query: 143 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 202
KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD
Sbjct: 199 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 258
Query: 203 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 262
NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR
Sbjct: 259 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 318
Query: 263 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 322
VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ
Sbjct: 319 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 378
Query: 323 IAKVEALLSS 332
IAKVEALLSS
Sbjct: 379 IAKVEALLSS 388
BLAST of MELO3C018010.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3E169 (rRNA biogenesis protein RRP36-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00530 PE=4 SV=1)
HSP 1 Score: 592 bits (1526), Expect = 1.56e-211
Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0
Query: 23 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 82
SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA
Sbjct: 79 SPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLVGQDMIPHESSLALESKPEGGA 138
Query: 83 GTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 142
GTGANR+SDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS
Sbjct: 139 GTGANRSSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNAGQVGRSFGRSTTSERGWWKDS 198
Query: 143 KDPDKDIDRKTITYKSQQRDEKSQAAREDRHHEGSSKLEVDALTPARKRPAFREKKITVD 202
KDPDKDIDRKTITYKSQQRDEK QAAREDRHHEGSSKLEVD LTPARKRPAFREKKITVD
Sbjct: 199 KDPDKDIDRKTITYKSQQRDEKPQAAREDRHHEGSSKLEVDTLTPARKRPAFREKKITVD 258
Query: 203 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 262
NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR
Sbjct: 259 NEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRYSEKLNNKHANGDMASKRDEMKR 318
Query: 263 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 322
VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ
Sbjct: 319 VGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQ 378
Query: 323 IAKVEALLSS 332
IAKVEALLSS
Sbjct: 379 IAKVEALLSS 388
BLAST of MELO3C018010.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1FPJ0 (pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)
HSP 1 Score: 482 bits (1241), Expect = 6.18e-169
Identity = 267/339 (78.76%), Postives = 288/339 (84.96%), Query Frame = 0
Query: 1 MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRL 60
MSRREARESDSKR+RSRFD+EPSPKRS+RDRK LEEKLSRNSSS VEDNKDRDQKHELR
Sbjct: 1 MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
Query: 61 VGQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSN 120
GQD PHESSLAL+S PEGG GANRNSD R+GGTK S+NP EVPRSRSYFQHD+R +
Sbjct: 61 EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
Query: 121 AGQVGRSFGRSTTSERGWWKDSKDPDKDIDR---KTITYKSQQRDEKSQAAREDRH---H 180
AGQVGRSFGRS++S RGWWKDSK+ DK+ DR KT TY SQ+RDE Q +ED H
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
Query: 181 EGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREER 240
+GSSKLEVD+ PARKRPAFREKKIT DNE+ EK M ESKK SD HQ Q+GRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREER 240
Query: 241 GRDTRYSEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT 300
GRDTRYS+KL+ KH GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY
Sbjct: 241 GRDTRYSDKLS-KHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA 300
Query: 301 SG-TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 332
SG TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Sbjct: 301 SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
BLAST of MELO3C018010.jh1 vs. TAIR 10
Match:
AT3G19650.1 (cyclin-related )
HSP 1 Score: 120.6 bits (301), Expect = 2.5e-27
Identity = 124/335 (37.01%), Postives = 165/335 (49.25%), Query Frame = 0
Query: 2 SRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSLVEDNKDRDQKHELRLV 61
+RRE+R+SD +RHRSR DREPSPKRS+RD K E++ V D D ++ L
Sbjct: 3 TRRESRDSDPRRHRSRIDREPSPKRSRRDGKPEAERVLSKKDLDVRDGTDTEKNSRQSL- 62
Query: 62 GQDMIPHESSLALESKPEGGAGTGANRNSDGRDGGTKHSVNPNEVPRSRSYFQHDERSNA 121
++ L L++ G+ + + G TK + + ++VPRSR Y QHD+R +
Sbjct: 63 ------RDAPLELDAH---GSRKDSEKKHSGHHETTKAAPHLSQVPRSRPYSQHDDRRSD 122
Query: 122 GQVGRSFGRSTTSERGWWKDSKDPDKDIDRKTITYKSQQR-DEKSQAAREDRHHEGSSKL 181
G+V R TS RG W+ S+D R KSQ R DE + R DR E
Sbjct: 123 GKV----DRRPTSVRGSWRSSRDQSN--RRAGDDEKSQHRKDEDKSSWRHDRFRESDD-- 182
Query: 182 EVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSSDMHQIQEGRERREERGRDTRY 241
AL +RKRPAFREKKI + + + K ++ R + E R +
Sbjct: 183 TQGAL--SRKRPAFREKKIAEETGNNTDRTRTEDGKDTN-----LNNRRQNERNWRSNTH 242
Query: 242 SEKLNNKHANGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRF--GGRQGYRTSGTR 301
SE+ D RD+ + G GS RDRF GR G+ S TR
Sbjct: 243 SERHERPAMGRDRVWNRDDER----------GAGSRQSYQADRDRFNGNGRSGFSGSWTR 302
Query: 302 VE-KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 333
E KW HDLF EAN+SP EE+QIAKVEALL+S
Sbjct: 303 NEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008454399.1 | 1.94e-226 | 99.10 | PREDICTED: uncharacterized protein LOC103494816 [Cucumis melo] | [more] |
XP_004152279.1 | 8.65e-217 | 94.93 | uncharacterized protein LOC101213709 [Cucumis sativus] >KGN52754.1 hypothetical ... | [more] |
KAA0044330.1 | 2.37e-213 | 100.00 | rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa] | [more] |
TYK29459.1 | 3.22e-211 | 99.03 | rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa] | [more] |
XP_038903819.1 | 1.46e-194 | 87.46 | uncharacterized protein LOC120090316 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BY17 | 9.38e-227 | 99.10 | uncharacterized protein LOC103494816 OS=Cucumis melo OX=3656 GN=LOC103494816 PE=... | [more] |
A0A0A0KV12 | 4.19e-217 | 94.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1 | [more] |
A0A5A7TM88 | 1.15e-213 | 100.00 | rRNA biogenesis protein RRP36-like isoform X2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3E169 | 1.56e-211 | 99.03 | rRNA biogenesis protein RRP36-like isoform X2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A6J1FPJ0 | 6.18e-169 | 78.76 | pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |