MELO3C018004 (gene) Melon (DHL92) v4

Overview


Name	MELO3C018004
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr07: 26179225 .. 26182293 (-)
RNA-Seq Expression	MELO3C018004
Synteny	MELO3C018004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATACCAAATGCATAAGGGGTTCTTAAAAAAAACAGAAAAATAATGCACTCAAGTTAGTTGTTAGGTCTATAAATAGAGAGAGTTAAAAGATCACGGAGATCCAGTCAAGAGAGAGAGAGAAAGCAAAGAAAGAGAGAAAAAAAAAATGGAGTGGAAAAAAGTTGCTTTAGTTGCAGTAATGGGGATGTTGGTTATGGCTACTTTTACAGAGTCGGTCGGTTTGGGGGTGGATGAGGAGATCATTCAATTAGTTTCGGACGGAGTGAATGAGTACTCACAAAATATTGGAAAGAAAAATGTAGGCTGCCCTCGAATCCTTATGAAGTGTAAAACCGATCGCGATTGCTTAACTGGCTGCACTTGCAAACGGAACGGCTATTGTGGTTGACTCTTGGCTGTGTCGTCTCGTATCAGCTTCTACGGTGTCTTTGTTAGTGTGTTTTCTATTTTGTGATAATAATAACGCATGGTTGTTGTGTGTCTTTGTCATAGATCACTTTACACTCGTATCTATGAGTTAGTGTGATCATATCCGTGGCAATATGTGATATCCCATCTAGCTGTTTCGTGTAATATTATTATGTTTTCTATGTCACTATGGTCTTTCAGGATATCTTCACCATCTTCTTTCATGAATTTAAAGTTTCATTTTTCTAACCATTAAACACTCAAATATGAAAAATCTGTAAGAAATTGAAATTTATTCATCTTGAAGAGTGTAGCTTCAAGAATAAAGAAAATTTCCCCTTTCCGCGGATGTAGGTCGTCGATTGCCGAACCACGTACATTTCCTTGTTCATATTCTTCTTCTTTTTTACTTCCTTTATTTGCATGTGTACGTATTACCTCCTTCAAATTTGTGCAATTCATAGTGAAGCTTGAGAGGTTTCTTTGAAGAGAGTAAAGTAGAGAGAGATCAATTTTCCTTTCTTTTCGTTTCTGTAAATTCAAAAGAAGAAACGCAAGAAAATTTGTACTTACCACGTGTGTAATTCCTAGGCAGAAAACGTGAACTCACCTCCTCGAAGCATTCCCACCTACCTCAACTTCATGGATCATCAATTGTTTCTCCATTATTGGGGCTGCAAATCAGTAAAAGTAAGCCCAACATAAATTTATTAGAAACCAACTTATATTATGTTTGAAATCCAACCCAAACACACCCTACCCTACATACGAAAGAGGGCAATATATTGTAACCGGCAGCATTTGAAGGAATATTAATTAAGAATCTAGTAATATTTAGAACAAATTGCAAATATAGAGCCTTTTTGTTAACAACGTGATTTGCTTTATATAAGTTCGACAATAATGTGTTGTTAGGACTCAATTTCCTTTTGTATTTAGGAATATCTGTCTTTTAAAATTTTAAATGTCAGGAAAGAGAAGAAAAGAAGCTAGAATTTATATATATGTTCTTATTTAGTTATAGTAGAGGGATGAAATAACAGAGAAGAGGATGTGTGGAATAATGGAAGGGGAAGCTCGTGGGTTGGGAAGGAATATATGAAAAAGTTTCATTGTATTTTACAGAGATTTCAAGCTTGAATTGATTTGAATCAATGTTTTTGTTGGCCAAGCAACTTATCAGTACGTCCACTGGTGGAAACATGGATTATTTGGGTAAGTAATTATTGAGTTTGACTGGGAAATGTTGAAGAAATAAGGTTTCAATAATGGTGACCGTTGCAGTCTCTCCAACTTAAATAGTCTGTTATTTACTGTGACCCAATAATTTAGACTCCAATAGTCAGTGTTAGTGATCTAAAGCAAACTATTTTAGTTTTGATTGTTGCAAAAGTATAATTACTCTACCTTCCACTTCAAAATTAGCAGGTTAAATTGGGGTAAAGAGATAAATGGCTTCCACAAGTTAGGATTCAATTCCTTCGGGAAAGATAACTTCAAATAAGGAGTATTCTTATAAATTTAGAGGGAGTCTAAATTCTTCACCATTAATACCCATATACTAAATTAGGAAGAGATTAGGTTCTAAAGGGAGGCTCGTATCTAGGAAGAGTCTAGATGTTCACGAGTTATATCTTTATGGTCATTACTATAATCTTGAGTGTATACAAATAAGTATAATATTGCAAGTGGTAGGCTTTCTTGAACTTTTACCTTCTATATTCATGGCAGGTATGATAATATTTTACCAAAATCCTTTCACATGCGTAGTCCATAAAGCTCTTCAAAAGTAAATAAATTTGTAAATACCATTGCACTTGCTAATATTATGAGGTTGGACACAATAGTCGATACACATAATTCCAAACTGGTCACTTCTTAAAGGTACTAGATCTATTATTTACAAGTCCCTAGCAATTATTGTTATTTATTTAGTTGACTTTGAGGATAAGAATTAGGTGTGGTTTACAAGATGATCTATTAAAATTAAATAAAATATGTATTGGGATACATATATTATTCAAACGTGATAAATATACAAATGAATTAATCAAGCTTTCGCCTGTTACATTTTTGGTTATAAATAGAGAAGGCAAATACAAAGCATAGAATTGGAGGAAGAGGATAGAAAAAGAGAGGAAAGGAAAAAGGAAAATAGTAAGAAAATTATGAAGAGCATGAATAAGAACATGGGTGCCGAGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTCGAATCAGCTGCCTCTCCTACCGAGAAGGCGATGATCGAACTTGTCACCGACCACCATGCTGCCAGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGAAATGGAGTTTGTCCCATAAGGGGTTGGCCGTGCATTCCTGCGTTCGGCTGTGGCCCTTTGTCCGGCGTTTGTGCTTGCTACACTTCTGGATATTGTGGAGATTACGTCGGTTGAAGTTGCACATTTTTTTTTGGTTTCTTTTTCGTTAGTCTTTCCTGTTTCGATGTTTTTCCAAAATAAATCTCTCTTTTATGTGAGATTTACTATGATAAATTTATGTAACAAAATCTTATGTTGTTAGATGCACAAAAAGGGAGGACGAGTACATTATCTTTTCTTTTCATCGCTTTCTAATAATATCAAAGTTTTAACAA

mRNA sequence

TGATACCAAATGCATAAGGGGTTCTTAAAAAAAACAGAAAAATAATGCACTCAAGTTAGTTGTTAGGTCTATAAATAGAGAGAGTTAAAAGATCACGGAGATCCAGTCAAGAGAGAGAGAGAAAGCAAAGAAAGAGAGAAAAAAAAAATGGAGTGGAAAAAAGTTGCTTTAGTTGCAGTAATGGGGATGTTGGTTATGGCTACTTTTACAGAGTCGGTCGGTTTGGGGGTGGATGAGGAGATCATTCAATTAGTTTCGGACGGAGTGAATGAGTACTCACAAAATATTGGAAAGAAAAATGTAGGCTGCCCTCGAATCCTTATGAAGTGTAAAACCGATCGCGATTGCTTAACTGGCTGCACTTGCAAACGGAACGGCTATTGTGGTTGACTCTTGGCTGTGTCGTCTCGTATCAGCTTCTACGGTGTCTTTGTTAGTGTGTTTTCTATTTTGTGATAATAATAACGCATGGTTGTTGTGTGTCTTTGTCATAGATCACTTTACACTCGTATCTATGAGTTAGTGTGATCATATCCGTGGCAATATGTGATATCCCATCTAGCTGTTTCGTGTAATATTATTATGTTTTCTATGTCACTATGGTCTTTCAGGATATCTTCACCATCTTCTTTCATGAATTTAAAGTTTCATTTTTCTAACCATTAAACACTCAAATATGAAAAATCTGTAAGAAATTGAAATTTATTCATCTTGAAGAGTGTAGCTTCAAGAATAAAGAAAATTTCCCCTTTCCGCGGATGTAGGTCGTCGATTGCCGAACCACGTACATTTCCTTGTTCATATTCTTCTTCTTTTTTACTTCCTTTATTTGCATGTGTACGTATTACCTCCTTCAAATTTGTGCAATTCATAGTGAAGCTTGAGAGGTTTCTTTGAAGAGAGTAAAGTAGAGAGAGATCAATTTTCCTTTCTTTTCGTTTCTGTAAATTCAAAAGAAGAAACGCAAGAAAATTTGTACTTACCACGTGTGTAATTCCTAGGCAGAAAACGTGAACTCACCTCCTCGAAGCATTCCCACCTACCTCAACTTCATGGATCATCAATTGTTTCTCCATTATTGGGGCTGCAAATCAGTAAAAAGAAGGCAAATACAAAGCATAGAATTGGAGGAAGAGGATAGAAAAAGAGAGGAAAGGAAAAAGGAAAATAGTAAGAAAATTATGAAGAGCATGAATAAGAACATGGGTGCCGAGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTCGAATCAGCTGCCTCTCCTACCGAGAAGGCGATGATCGAACTTGTCACCGACCACCATGCTGCCAGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGAAATGGAGTTTGTCCCATAAGGGGTTGGCCGTGCATTCCTGCGTTCGGCTGTGGCCCTTTGTCCGGCGTTTGTGCTTGCTACACTTCTGGATATTGTGGAGATTACGTCGGTTGAAGTTGCACATTTTTTTTTGGTTTCTTTTTCGTTAGTCTTTCCTGTTTCGATGTTTTTCCAAAATAAATCTCTCTTTTATGTGAGATTTACTATGATAAATTTATGTAACAAAATCTTATGTTGTTAGATGCACAAAAAGGGAGGACGAGTACATTATCTTTTCTTTTCATCGCTTTCTAATAATATCAAAGTTTTAACAA

Coding sequence (CDS)

ATGGATCATCAATTGTTTCTCCATTATTGGGGCTGCAAATCAGTAAAAAGAAGGCAAATACAAAGCATAGAATTGGAGGAAGAGGATAGAAAAAGAGAGGAAAGGAAAAAGGAAAATAGTAAGAAAATTATGAAGAGCATGAATAAGAACATGGGTGCCGAGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTCGAATCAGCTGCCTCTCCTACCGAGAAGGCGATGATCGAACTTGTCACCGACCACCATGCTGCCAGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGAAATGGAGTTTGTCCCATAAGGGGTTGGCCGTGCATTCCTGCGTTCGGCTGTGGCCCTTTGTCCGGCGTTTGTGCTTGCTACACTTCTGGATATTGTGGAGATTACGTCGGTTGA

Protein sequence

MDHQLFLHYWGCKSVKRRQIQSIELEEEDRKREERKKENSKKIMKSMNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVCPIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG

Homology

[Close]

BLAST of MELO3C018004 vs. NCBI nr
Match: KAA0044336.1 (hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465.1 hypothetical protein E5676_scaffold655G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 47  MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 106
           MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC
Sbjct: 1   MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 60

Query: 107 PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 140
           PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG
Sbjct: 61  PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 93

[Close]

BLAST of MELO3C018004 vs. NCBI nr
Match: KAA0044337.1 (hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466.1 hypothetical protein E5676_scaffold655G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 44  MKSMNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGN 103
           MKSMN+N+GA ATMMVMMLLIATVVES ASPTEK MI+LVTDHHAA SFPRKMMRNGKGN
Sbjct: 1   MKSMNRNIGAAATMMVMMLLIATVVES-ASPTEK-MIKLVTDHHAAGSFPRKMMRNGKGN 60

Query: 104 GVCPIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 140
           GVCPI GWPC PA+GCGP S  CACYT+G+CGD+VG
Sbjct: 61  GVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94

[Close]

BLAST of MELO3C018004 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_014579 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 6.1e-30
Identity = 78/99 (78.79%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 44  MKSMNKNMG-AEATMMVMMLLIATVVESAASPTEK-AMIELVTDHHAASSFPRKMMRNGK 103
           MK M+KN+G A ATMMVMMLLIATVVES ASPTEK  MIELVT+HHAASSFPRKMMRNGK
Sbjct: 1   MKRMDKNIGLAVATMMVMMLLIATVVES-ASPTEKITMIELVTNHHAASSFPRKMMRNGK 60

Query: 104 GNGVCPIRGWPCIPAF-GCGPLSGVCACYTSGYCGDYVG 140
           GNGVCPI G PC P + GCGP S  CACYT+G+CGD+VG
Sbjct: 61  GNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

[Close]

BLAST of MELO3C018004 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_014543 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-04
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 44  MKSMNKNMGAEATMMVMML--LIATVVESAASPTEKAMIELVTDHHAASSFPRK-MMRNG 103
           M+S  K++   AT++V+M+  +IAT+ +SA   TE     ++ D   + +FPRK +++NG
Sbjct: 1   MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVD-GGSHAFPRKNVVKNG 60

Query: 104 KGNGVCPIRGWPCIPAFGCGPLSGVCACYTSGYCGDYV 139
           + NGVC ++G  C     C      CACYT+G+CGD+V
Sbjct: 61  E-NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWV 93

[Close]

BLAST of MELO3C018004 vs. ExPASy TrEMBL
Match: A0A5D3E254 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00610 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 47  MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 106
           MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC
Sbjct: 1   MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 60

Query: 107 PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 140
           PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG
Sbjct: 61  PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 93

[Close]

BLAST of MELO3C018004 vs. ExPASy TrEMBL
Match: A0A5D3E0N0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00620 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.0e-36
Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 44  MKSMNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGN 103
           MKSMN+N+GA ATMMVMMLLIATVVES ASPTEK MI+LVTDHHAA SFPRKMMRNGKGN
Sbjct: 1   MKSMNRNIGAAATMMVMMLLIATVVES-ASPTEK-MIKLVTDHHAAGSFPRKMMRNGKGN 60

Query: 104 GVCPIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 140
           GVCPI GWPC PA+GCGP S  CACYT+G+CGD+VG
Sbjct: 61  GVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94

[Close]

BLAST of MELO3C018004 vs. ExPASy TrEMBL
Match: A0A0A0KWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-30
Identity = 78/99 (78.79%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 44  MKSMNKNMG-AEATMMVMMLLIATVVESAASPTEK-AMIELVTDHHAASSFPRKMMRNGK 103
           MK M+KN+G A ATMMVMMLLIATVVES ASPTEK  MIELVT+HHAASSFPRKMMRNGK
Sbjct: 1   MKRMDKNIGLAVATMMVMMLLIATVVES-ASPTEKITMIELVTNHHAASSFPRKMMRNGK 60

Query: 104 GNGVCPIRGWPCIPAF-GCGPLSGVCACYTSGYCGDYVG 140
           GNGVCPI G PC P + GCGP S  CACYT+G+CGD+VG
Sbjct: 61  GNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

[Close]

BLAST of MELO3C018004 vs. ExPASy TrEMBL
Match: A0A0A0KT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 44  MKSMNKNMGAEATMMVMML--LIATVVESAASPTEKAMIELVTDHHAASSFPRK-MMRNG 103
           M+S  K++   AT++V+M+  +IAT+ +SA   TE     ++ D   + +FPRK +++NG
Sbjct: 1   MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVD-GGSHAFPRKNVVKNG 60

Query: 104 KGNGVCPIRGWPCIPAFGCGPLSGVCACYTSGYCGDYV 139
           + NGVC ++G  C     C      CACYT+G+CGD+V
Sbjct: 61  E-NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWV 93

The following BLAST results are available for this feature:

BLAST of MELO3C018004 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044336.1	2.3e-45	100.00	hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465...	[more]
KAA0044337.1	1.6e-35	83.33	hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466...	[more]
KGN52762.1	6.1e-30	78.79	hypothetical protein Csa_014579 [Cucumis sativus]	[more]
KGN52763.1	5.7e-04	38.78	hypothetical protein Csa_014543 [Cucumis sativus]	[more]

BLAST of MELO3C018004 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C018004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E254	1.1e-45	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E0N0	8.0e-36	83.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KWE4	2.9e-30	78.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1	[more]
A0A0A0KT53	2.8e-04	38.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1	[more]

BLAST of MELO3C018004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018004.1	MELO3C018004.1	mRNA