MELO3C018003.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C018003.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 27164248 .. 27165114 (-)
RNA-Seq ExpressionMELO3C018003.jh1
SyntenyMELO3C018003.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTATACATTATTCAAACGTGATAAATATACAAATGGATTAATCAAGCTCGCCTTTCACATTTTTGGTTATAAATAGAAGGCAGATACAAAGCATAGAATTGGAGGAAGAGAATAGAAAGAGAGGAAGGAGAAAAGAAAATAGGAAGAAAATGAAGAGCATGAATAGGAACATTGGTGCGGCGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTTGAATCAGCCTCTCCTACCGAGAAGATGATCAAACTTGTCACCGACCACCATGCTGCCGGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGGAATGGAGTTTGTCCCATAACAGGTTGGCCGTGCAATCCTGCGTATGGCTGTGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGAAGCTGCATGCACATTTGTGTTGTATCTTTCTCCCTTAGTCTTTCCTCTTTCTATATGTTTCGCCAAAATAAATCTCTCTCTCTTTTGTGAGATTCATTATGATAAAATTATGTATAACAAAATCTTATATGTTCTTCGATACACACAAAATGGGAGGAGGATATTATCTTTTCTTTTCATTGCTTTCTAAAGTCTAATCCCATGAGTTATGTCTAGAGGTTAATTTATTTACAGATGTAACAAAAATTTACTTTTTATATAGATAATGTTAGATTATATTCAGACAAACATCAATAAATTTATTGATAGATGTTTGTTTGAATTTTCTGTCTTTTGGACAAAAAGTAAATTTTTTAATATTTAGAAAATAATAAATATTTTCAAATAGTTTGGTAATGGAGGAGGACAGAATTGTCATTTTTCTTAATTT

mRNA sequence

TAATTATACATTATTCAAACGTGATAAATATACAAATGGATTAATCAAGCTCGCCTTTCACATTTTTGGTTATAAATAGAAGGCAGATACAAAGCATAGAATTGGAGGAAGAGAATAGAAAGAGAGGAAGGAGAAAAGAAAATAGGAAGAAAATGAAGAGCATGAATAGGAACATTGGTGCGGCGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTTGAATCAGCCTCTCCTACCGAGAAGATGATCAAACTTGTCACCGACCACCATGCTGCCGGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGGAATGGAGTTTGTCCCATAACAGGTTGGCCGTGCAATCCTGCGTATGGCTGTGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGAAGCTGCATGCACATTTGTGTTGTATCTTTCTCCCTTAGTCTTTCCTCTTTCTATATGTTTCGCCAAAATAAATCTCTCTCTCTTTTGTGAGATTCATTATGATAAAATTATGTATAACAAAATCTTATATGTTCTTCGATACACACAAAATGGGAGGAGGATATTATCTTTTCTTTTCATTGCTTTCTAAAGTCTAATCCCATGAGTTATGTCTAGAGGTTAATTTATTTACAGATGTAACAAAAATTTACTTTTTATATAGATAATGTTAGATTATATTCAGACAAACATCAATAAATTTATTGATAGATGTTTGTTTGAATTTTCTGTCTTTTGGACAAAAAGTAAATTTTTTAATATTTAGAAAATAATAAATATTTTCAAATAGTTTGGTAATGGAGGAGGACAGAATTGTCATTTTTCTTAATTT

Coding sequence (CDS)

ATGAAGAGCATGAATAGGAACATTGGTGCGGCGGCCACGATGATGGTGATGATGCTTCTGATTGCTACCGTCGTTGAATCAGCCTCTCCTACCGAGAAGATGATCAAACTTGTCACCGACCACCATGCTGCCGGTTCTTTCCCACGCAAAATGATGAGAAATGGGAAAGGGAATGGAGTTTGTCCCATAACAGGTTGGCCGTGCAATCCTGCGTATGGCTGTGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGA

Protein sequence

MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG
Homology
BLAST of MELO3C018003.jh1 vs. NCBI nr
Match: KAA0044337.1 (hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466.1 hypothetical protein E5676_scaffold655G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (495), Expect = 8.93e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV 60
          MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV
Sbjct: 1  MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV 60

Query: 61 CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94
          CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG
Sbjct: 61 CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94

BLAST of MELO3C018003.jh1 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_014579 [Cucumis sativus])

HSP 1 Score: 157 bits (398), Expect = 6.36e-48
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0

Query: 1  MKSMNRNIG-AAATMMVMMLLIATVVESASPTEK--MIKLVTDHHAAGSFPRKMMRNGKG 60
          MK M++NIG A ATMMVMMLLIATVVESASPTEK  MI+LVT+HHAA SFPRKMMRNGKG
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60

Query: 61 NGVCPITGWPCNPAYG-CGPFSDSCACYTAGHCGDFVG 94
          NGVCPI G PCNP YG CGPFSD+CACYTAGHCGDFVG
Sbjct: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

BLAST of MELO3C018003.jh1 vs. NCBI nr
Match: KAA0044336.1 (hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465.1 hypothetical protein E5676_scaffold655G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 1.83e-46
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0

Query: 4  MNRNIGAAATMMVMMLLIATVVESA-SPTEK-MIKLVTDHHAAGSFPRKMMRNGKGNGVC 63
          MN+N+GA ATMMVMMLLIATVVESA SPTEK MI+LVTDHHAA SFPRKMMRNGKGNGVC
Sbjct: 1  MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 60

Query: 64 PITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94
          PI GWPC PA+GCGP S  CACYT+G+CGD+VG
Sbjct: 61 PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 93

BLAST of MELO3C018003.jh1 vs. NCBI nr
Match: KAA0044338.1 (hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467.1 hypothetical protein E5676_scaffold655G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 8.77e-10
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 10 AAATMMVMML--LIATVVESASPTEKMIKLVTDHHAAGSFPRK-MMRNGKGNGVCPITGW 69
          + AT++VMM+  +IAT+ +S   TE +      +  + +FPRK +M+NG  NGVC + G 
Sbjct: 11 SVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGDQNGVCLVKGK 70

Query: 70 PCNPAYGCGPFSDSCACYTAGHCGDFV 93
           C     C     +CACYTAGHCGD+V
Sbjct: 71 ACKSHKDC---PSNCACYTAGHCGDWV 94

BLAST of MELO3C018003.jh1 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_014543 [Cucumis sativus])

HSP 1 Score: 57.0 bits (136), Expect = 3.91e-08
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 0

Query: 1  MKSMNRNIGAAATMMVMML--LIATVVESAS-PTEKMIKLVTDHHAAGSFPRK-MMRNGK 60
          M+S  ++I   AT++V+M+  +IAT+ +SA+  TE +   V     + +FPRK +++NG+
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

Query: 61 GNGVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFV 93
           NGVC + G  C     C      CACYTAGHCGD+V
Sbjct: 61 -NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWV 93

BLAST of MELO3C018003.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E0N0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00620 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.32e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV 60
          MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV
Sbjct: 1  MKSMNRNIGAAATMMVMMLLIATVVESASPTEKMIKLVTDHHAAGSFPRKMMRNGKGNGV 60

Query: 61 CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94
          CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG
Sbjct: 61 CPITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94

BLAST of MELO3C018003.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 3.08e-48
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0

Query: 1  MKSMNRNIG-AAATMMVMMLLIATVVESASPTEK--MIKLVTDHHAAGSFPRKMMRNGKG 60
          MK M++NIG A ATMMVMMLLIATVVESASPTEK  MI+LVT+HHAA SFPRKMMRNGKG
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60

Query: 61 NGVCPITGWPCNPAYG-CGPFSDSCACYTAGHCGDFVG 94
          NGVCPI G PCNP YG CGPFSD+CACYTAGHCGDFVG
Sbjct: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

BLAST of MELO3C018003.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E254 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00610 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 8.87e-47
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0

Query: 4  MNRNIGAAATMMVMMLLIATVVESA-SPTEK-MIKLVTDHHAAGSFPRKMMRNGKGNGVC 63
          MN+N+GA ATMMVMMLLIATVVESA SPTEK MI+LVTDHHAA SFPRKMMRNGKGNGVC
Sbjct: 1  MNKNMGAEATMMVMMLLIATVVESAASPTEKAMIELVTDHHAASSFPRKMMRNGKGNGVC 60

Query: 64 PITGWPCNPAYGCGPFSDSCACYTAGHCGDFVG 94
          PI GWPC PA+GCGP S  CACYT+G+CGD+VG
Sbjct: 61 PIRGWPCIPAFGCGPLSGVCACYTSGYCGDYVG 93

BLAST of MELO3C018003.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E009 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00630 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.25e-10
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 10 AAATMMVMML--LIATVVESASPTEKMIKLVTDHHAAGSFPRK-MMRNGKGNGVCPITGW 69
          + AT++VMM+  +IAT+ +S   TE +      +  + +FPRK +M+NG  NGVC + G 
Sbjct: 11 SVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGDQNGVCLVKGK 70

Query: 70 PCNPAYGCGPFSDSCACYTAGHCGDFV 93
           C     C     +CACYTAGHCGD+V
Sbjct: 71 ACKSHKDC---PSNCACYTAGHCGDWV 94

BLAST of MELO3C018003.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.89e-08
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 0

Query: 1  MKSMNRNIGAAATMMVMML--LIATVVESAS-PTEKMIKLVTDHHAAGSFPRK-MMRNGK 60
          M+S  ++I   AT++V+M+  +IAT+ +SA+  TE +   V     + +FPRK +++NG+
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

Query: 61 GNGVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFV 93
           NGVC + G  C     C      CACYTAGHCGD+V
Sbjct: 61 -NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWV 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0044337.18.93e-63100.00hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466... [more]
KGN52762.16.36e-4884.69hypothetical protein Csa_014579 [Cucumis sativus][more]
KAA0044336.11.83e-4682.80hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465... [more]
KAA0044338.18.77e-1042.53hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467... [more]
KGN52763.13.91e-0841.24hypothetical protein Csa_014543 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E0N04.32e-63100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KWE43.08e-4884.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1[more]
A0A5D3E2548.87e-4782.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3E0094.25e-1042.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KT531.89e-0841.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018003.jh1.t1MELO3C018003.jh1.t1mRNA