MELO3C018001.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C018001.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 27159027 .. 27159652 (+)
RNA-Seq ExpressionMELO3C018001.jh1
SyntenyMELO3C018001.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACACAAAAAGAGATCAAGAATAAAGTTAGGATAAATGGAGGGTTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACAGCTACAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTATTGATCACAGCCAACGATGAGTCGTCGCACCGACGAACACGATCGGATTACCAGCCACCAACATTTGAGTTTTTGGACCAACAACGACCGTCACAGGAGTTAACACATTCCCGCAGCGTCAACAAAGTCGCCTTTGGATCGTCTACTAGACCTAGTAATGGATTTGAATCTAACTTCTATTCTTATGCTGGTCAAGTTTCAAATAGGCCTGCTTATAGTTATGGTAATCCTCCTCGTTGAAAAAAATTAGCAAAATGTGAGGAGGAATATTATTATTGTTTAAAACTCTAATTAGCAATTTGGAAAATGTTTTTTCTTCTTCTTTTTATTTGTTGAATTGTATTGCTTGGTGAAGATCAATGCGTAAAGAGGTGGATCTCTCCATGAAAATATGGTCTGAGCAGCCACCTTTTATGAATTTGAAATTGTACATTAAATTTGTTGGAAAGTATTCTTTTCTTTAATTTGGTTTAAAAAATGAAGTCC

mRNA sequence

TTAAACACAAAAAGAGATCAAGAATAAAGTTAGGATAAATGGAGGGTTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACAGCTACAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTATTGATCACAGCCAACGATGAGTCGTCGCACCGACGAACACGATCGGATTACCAGCCACCAACATTTGAGTTTTTGGACCAACAACGACCGTCACAGGAGTTAACACATTCCCGCAGCGTCAACAAAGTCGCCTTTGGATCGTCTACTAGACCTAGTAATGGATTTGAATCTAACTTCTATTCTTATGCTGGTCAAGTTTCAAATAGGCCTGCTTATAGTTATGGTAATCCTCCTCGTTGAAAAAAATTAGCAAAATGTGAGGAGGAATATTATTATTGTTTAAAACTCTAATTAGCAATTTGGAAAATGTTTTTTCTTCTTCTTTTTATTTGTTGAATTGTATTGCTTGGTGAAGATCAATGCGTAAAGAGGTGGATCTCTCCATGAAAATATGGTCTGAGCAGCCACCTTTTATGAATTTGAAATTGTACATTAAATTTGTTGGAAAGTATTCTTTTCTTTAATTTGGTTTAAAAAATGAAGTCC

Coding sequence (CDS)

ATGGAGGGTTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACAGCTACAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTATTGATCACAGCCAACGATGAGTCGTCGCACCGACGAACACGATCGGATTACCAGCCACCAACATTTGAGTTTTTGGACCAACAACGACCGTCACAGGAGTTAACACATTCCCGCAGCGTCAACAAAGTCGCCTTTGGATCGTCTACTAGACCTAGTAATGGATTTGAATCTAACTTCTATTCTTATGCTGGTCAAGTTTCAAATAGGCCTGCTTATAGTTATGGTAATCCTCCTCGTTGA

Protein sequence

MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLDQQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR
Homology
[Close]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match: KAA0044340.1 (putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa] >TYK29469.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (592), Expect = 5.71e-77
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113
           QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR
Sbjct: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113

[Close]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match: KGN52765.1 (hypothetical protein Csa_015267 [Cucumis sativus])

HSP 1 Score: 214 bits (546), Expect = 5.76e-70
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113
           Q R ++ELTHSRSVNKVAFGSSTRPSNGFESNFYSY GQVSNRPAY+YGNP R
Sbjct: 61  Q-RSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSNRPAYNYGNPSR 112

[Close]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match: XP_038905929.1 (uncharacterized protein LOC120091851 [Benincasa hispida])

HSP 1 Score: 175 bits (443), Expect = 2.85e-54
Identity = 91/112 (81.25%), Postives = 97/112 (86.61%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLIT NDESSHRRTRSD+QPP  EF D
Sbjct: 1   MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLIT-NDESSHRRTRSDFQPPALEFSD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPP 112
           Q R + EL HSRSV+K AFGSSTRPS GFES F SY GQV+N+P Y YGNPP
Sbjct: 61  Q-RSTHELMHSRSVSKGAFGSSTRPSYGFESGFSSYPGQVTNKPTY-YGNPP 109

[Close]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match: KAG6576920.1 (hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139 bits (349), Expect = 3.36e-40
Identity = 79/113 (69.91%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLT--NDESSHRRTRSDFQPPRFEYLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113
           Q R   EL HSRSV+K AFGS             SYAGQVSN      GN PR
Sbjct: 61  Q-RSGHELMHSRSVSKGAFGS-------------SYAGQVSNN-----GNLPR 92

[Close]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match: KAG7014945.1 (NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (344), Expect = 9.95e-39
Identity = 75/102 (73.53%), Postives = 78/102 (76.47%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLT--NDESSHRRTRSDFQPPRFEYLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSN 102
           Q R   EL HSRSV+K AFGS             SYAGQVSN
Sbjct: 61  Q-RSGHELMHSRSVSKGAFGS-------------SYAGQVSN 86

[Close]
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TM95 (Putative beta-D-xylosidase 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00650 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 2.76e-77
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113
           QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR
Sbjct: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113

[Close]
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KT06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 2.79e-70
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60
           MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSYGNPPR 113
           Q R ++ELTHSRSVNKVAFGSSTRPSNGFESNFYSY GQVSNRPAY+YGNP R
Sbjct: 61  Q-RSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSNRPAYNYGNPSR 112

[Close]
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match: A0A5N6QPG1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004630 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 9.63e-26
Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0 

Query: 1  MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITAND--ESSHRRTRSDYQPPTFEF 60
          MEGLIPYL HA+KKQKP+HSYRS S GS+RSYHLL+ ++    SSHRRTRSD+QPP  EF
Sbjct: 1  MEGLIPYLVHAIKKQKPQHSYRSFSEGSTRSYHLLLNSDSLSGSSHRRTRSDFQPPNMEF 60

Query: 61 LDQQRPSQELTHSRSVNKVA 78
          ++Q+   ++L  S S NK +
Sbjct: 61 VEQRSGVEQLVRSYSTNKTS 80

[Close]
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match: B9SNE5 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.85e-23
Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITAND--ESSHRRTRSDYQPPTFEF 60
           MEGLIPYL HA++KQKP++SYRS SVGSSRSYHLL  A+    SSHRRTRS++QPPT E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVS 101
           LDQ R   E   S S+      +S + ++G +    SY  Q+S
Sbjct: 61  LDQ-RQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMS 102

[Close]
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match: A0A067L7P7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16324 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.22e-23
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0 

Query: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDE---SSHRRTRSDYQPPTFE 60
           MEGLIPYL HAMKKQKP ++YRS S GSSRSYHLL+   D    SSHRRTRSD+QP   +
Sbjct: 1   MEGLIPYLLHAMKKQKPHNNYRSFSAGSSRSYHLLVGGVDSVSGSSHRRTRSDFQPSNLD 60

Query: 61  FLDQQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSNRPAYSY 108
           F +Q R  + L  +  + + A   +    + F +N+Y++  QV N  + S+
Sbjct: 61  FFEQ-RSGENLRSNSLIKRTANSPAVANGSTFGANYYNH--QVKNNTSVSH 108

[Close]
BLAST of MELO3C018001.jh1 vs. TAIR 10
Match: AT3G19615.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 10 Blast hits to 10 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 42/73 (57.53%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 1  MEGLIPYLFHAMKK-QKPRHS-YRSQSVGSSRSYHLLITAND------ESSHRRTRSDYQ 60
          MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L+   D       SSHRRTRSDY 
Sbjct: 1  MEGLIPYLIHAIKKDHKPDHQRYRSISVGSSRSYRPLMMGQDGSSSMQGSSHRRTRSDYN 60

Query: 61 PPTFEFLDQQRPS 66
          P        QR S
Sbjct: 61 PHVIMDKFDQRSS 73

The following BLAST results are available for this feature:
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044340.15.71e-77100.00putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa] >TYK29469.1 p... [more]
KGN52765.15.76e-7093.81hypothetical protein Csa_015267 [Cucumis sativus][more]
XP_038905929.12.85e-5481.25uncharacterized protein LOC120091851 [Benincasa hispida][more]
KAG6576920.13.36e-4069.91hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7014945.19.95e-3973.53NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. ... [more]
BLAST of MELO3C018001.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C018001.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TM952.76e-77100.00Putative beta-D-xylosidase 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0KT062.79e-7093.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1[more]
A0A5N6QPG19.63e-2661.25Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004630 PE=4 SV=1[more]
B9SNE51.85e-2354.37Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1[more]
A0A067L7P72.22e-2347.75Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16324 PE=4 SV=1[more]
BLAST of MELO3C018001.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G19615.11.6e-1057.53unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38370BETA-1,4-XYLOSIDASEcoord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018001.jh1.t1MELO3C018001.jh1.t1mRNA