MELO3C017971.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017971.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein RALF-like 33
Location	chr07: 27010080 .. 27010605 (+)
RNA-Seq Expression	MELO3C017971.jh1
Synteny	MELO3C017971.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGGGCAGCAATGGGCAACTCCTCTTCTCCACCTGCCTTTACTATTCTCATTTTCACCGTAGCCGTCTTCGTCTCGTCATCCTCTTTAGCAGTCACGGCCATGAGTAGCGACCAGAGTCTCAATTGGCTCTCGACGGAAGTACGATGCCATGGACGTTCCATAAGCGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAACCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCGTTGAAGGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAAGAAAAGCTCTATCTTCTTGTTTGATTTTTCTCTTTGTAACATAGAATAAATTTGAAAAAGGCTGTGTTGCCATGTTTGGGTTTGGAGTAGATTTTTAACATTATTGTAAACTTATCTTTACAAATATAAAATAAAAAATTCTAAGTAGAAAA

mRNA sequence

CAAGGGCAGCAATGGGCAACTCCTCTTCTCCACCTGCCTTTACTATTCTCATTTTCACCGTAGCCGTCTTCGTCTCGTCATCCTCTTTAGCAGTCACGGCCATGAGTAGCGACCAGAGTCTCAATTGGCTCTCGACGGAAGTACGATGCCATGGACGTTCCATAAGCGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAACCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCGTTGAAGGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAAGAAAAGCTCTATCTTCTTGTTTGATTTTTCTCTTTGTAACATAGAATAAATTTGAAAAAGGCTGTGTTGCCATGTTTGGGTTTGGAGTAGATTTTTAACATTATTGTAAACTTATCTTTACAAATATAAAATAAAAAATTCTAAGTAGAAAA

Coding sequence (CDS)

ATGGGCAACTCCTCTTCTCCACCTGCCTTTACTATTCTCATTTTCACCGTAGCCGTCTTCGTCTCGTCATCCTCTTTAGCAGTCACGGCCATGAGTAGCGACCAGAGTCTCAATTGGCTCTCGACGGAAGTACGATGCCATGGACGTTCCATAAGCGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAACCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCGTTGAAGGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAA

Protein sequence

MGNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIEFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS

Homology

[Close]

BLAST of MELO3C017971.jh1 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (602), Expect = 2.86e-78
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIEF 60
           MGNSSSPPAFTILIFT+AVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMM IEF
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIEF 60

Query: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120
           EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS
Sbjct: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120

[Close]

BLAST of MELO3C017971.jh1 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_014956 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 1.84e-70
Identity = 109/122 (89.34%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGNSSSPPAFTILIFTVAVFVSSSS--LAVTAMSSDQSLNWLSTEVRCHGRSISECMMNI 60
           MG+SSSPPA +ILIFT+A FVSSSS  L VT MSSD+SLNWLSTE RCHGRSISECMM+I
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120
           EFEMDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

[Close]

BLAST of MELO3C017971.jh1 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata])

HSP 1 Score: 214 bits (545), Expect = 1.46e-69
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGNSSSPPAF-TILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIE 60
           MGNSSSPPAF ++LIFT+A FVSSSSL V AMS D+SL+WLSTE RCHGRS+SECMM++E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDVE 60

Query: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120
           FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of MELO3C017971.jh1 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima])

HSP 1 Score: 213 bits (543), Expect = 2.95e-69
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MGNSSSPPAF-TILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIE 60
           MGNSSSPPAF ++LIFT+A FVSSSSL V AMS D+SL+WLSTE RCHGR +SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNVE 60

Query: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120
           FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of MELO3C017971.jh1 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213 bits (542), Expect = 4.19e-69
Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MGNSSSPPAF-TILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIE 60
           MGNSSSPPAF ++LIFT+A FV SSSL V AMS D SL+WLSTE RCHGRS+SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVYSSSLMVMAMSGDHSLSWLSTEARCHGRSLSECMMNVE 60

Query: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120
           FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-25
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   GNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNI--- 61
           G S+ P A  I I TV            A++S  S +++  E +C+G +I+EC ++    
Sbjct: 3   GLSTKPVAIIIAILTV-------HFLFAAVTSQSSGDFVPIESKCNG-TIAECSLSTAEE 62

Query: 62  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120
           EFEMDSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNC+ GA+ANPY RGC+AITRC
Sbjct: 63  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.5e-24
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 10  FTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVR---CHGRSISECMMNIEFEMDSEI 69
           F  L   V   +SS  +     +    + W +T      CHG SI+EC+   E EMDSEI
Sbjct: 8   FLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSEI 67

Query: 70  NRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 121
           NRRILAT+ YISY+SLK N++PCSRRG+SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 68  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.8e-23
Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 3   NSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECM------- 62
           NS +   F IL+    + V + S+AV++ S++ + ++   E  C G +I+EC        
Sbjct: 7   NSGAAAIFAILLI---LAVHNWSVAVSSQSTEFAGDFPPFETECRG-TIAECSVSAALGD 66

Query: 63  ----------MNIEFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEA 120
                     M  EFEMDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+A
Sbjct: 67  GGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQA 126

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 17  VAVFVSSSSLAVTAMSSDQSLNWL---STEVRCHGRSISECMM-NIEFEMDSEINRRILA 76
           + V + +  +++ A     + +W+    +   C G SI EC+    EFE+DSE NRRILA
Sbjct: 9   LCVLIGAFFISMAAAGDSGAYDWVMPARSGGGCKG-SIGECIAEEEEFELDSESNRRILA 68

Query: 77  TSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 121
           T  YISY +L+ N++PCSRRG+SYYNC+PGA+ANPY RGC+AITRCRS
Sbjct: 69  TKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.7e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 46  CHGRSISECMM-NIEFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 105
           C G SI+EC+    E E DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 106 ANPYQRGCTAITRCR 120
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 1.38e-78
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIEF 60
           MGNSSSPPAFTILIFT+AVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMM IEF
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIEF 60

Query: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120
           EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS
Sbjct: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1)

HSP 1 Score: 216 bits (551), Expect = 8.89e-71
Identity = 109/122 (89.34%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGNSSSPPAFTILIFTVAVFVSSSS--LAVTAMSSDQSLNWLSTEVRCHGRSISECMMNI 60
           MG+SSSPPA +ILIFT+A FVSSSS  L VT MSSD+SLNWLSTE RCHGRSISECMM+I
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120
           EFEMDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1)

HSP 1 Score: 214 bits (545), Expect = 7.08e-70
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGNSSSPPAF-TILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIE 60
           MGNSSSPPAF ++LIFT+A FVSSSSL V AMS D+SL+WLSTE RCHGRS+SECMM++E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDVE 60

Query: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120
           FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1)

HSP 1 Score: 213 bits (543), Expect = 1.43e-69
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MGNSSSPPAF-TILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIE 60
           MGNSSSPPAF ++LIFT+A FVSSSSL V AMS D+SL+WLSTE RCHGR +SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNVE 60

Query: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120
           FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL
Match: A0A6J5XM33 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 SV=1)

HSP 1 Score: 136 bits (342), Expect = 5.14e-39
Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MGNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIEF 60
           M NSSS   F   +FT  + +S+ ++       D  L+W+ +  RC G SI+ECM + EF
Sbjct: 1   MANSSSIFLFAFYMFTATLIISTWTVHA---GGDHGLSWVPSRTRCQG-SIAECMADDEF 60

Query: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120
           +MDSEINRRILATS YISY +L+ N +PCSRRG+SYYNC+PGAE+NPY RGC+AI RCRS
Sbjct: 61  DMDSEINRRILATSQYISYGALQRNTVPCSRRGASYYNCKPGAESNPYNRGCSAIARCRS 116

[Close]

BLAST of MELO3C017971.jh1 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   GNSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNI--- 61
           G S+ P A  I I TV            A++S  S +++  E +C+G +I+EC ++    
Sbjct: 3   GLSTKPVAIIIAILTV-------HFLFAAVTSQSSGDFVPIESKCNG-TIAECSLSTAEE 62

Query: 62  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120
           EFEMDSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNC+ GA+ANPY RGC+AITRC
Sbjct: 63  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of MELO3C017971.jh1 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 112.1 bits (279), Expect = 3.2e-25
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 10  FTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVR---CHGRSISECMMNIEFEMDSEI 69
           F  L   V   +SS  +     +    + W +T      CHG SI+EC+   E EMDSEI
Sbjct: 8   FLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSEI 67

Query: 70  NRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 121
           NRRILAT+ YISY+SLK N++PCSRRG+SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 68  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MELO3C017971.jh1 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-24
Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 3   NSSSPPAFTILIFTVAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECM------- 62
           NS +   F IL+    + V + S+AV++ S++ + ++   E  C G +I+EC        
Sbjct: 7   NSGAAAIFAILLI---LAVHNWSVAVSSQSTEFAGDFPPFETECRG-TIAECSVSAALGD 66

Query: 63  ----------MNIEFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEA 120
                     M  EFEMDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+A
Sbjct: 67  GGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQA 126

[Close]

BLAST of MELO3C017971.jh1 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-21
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 46  CHGRSISECMM-NIEFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 105
           C G SI+EC+    E E DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 106 ANPYQRGCTAITRCR 120
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C017971.jh1 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 81.3 bits (199), Expect = 6.0e-16
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 25  SLAVTAMSSDQSLNWLSTEVRCHGRSISECMMNIEFEMDSEINRRILAT-SSYISYKSLK 84
           +LAV A S++ +  W  T+   +G+        +++ MDSE NRR LA   SYISY +L+
Sbjct: 13  TLAVVAESANAT--WTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALR 72

Query: 85  ANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 119
            NN+PCSRRG SYY+C+    ANPY+RGC+ IT C
Sbjct: 73  KNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of MELO3C017971.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044366.1	2.86e-78	98.33	protein RALF-like 33 [Cucumis melo var. makuwa]	[more]
KGN52797.1	1.84e-70	89.34	hypothetical protein Csa_014956 [Cucumis sativus]	[more]
XP_022934551.1	1.46e-69	87.60	protein RALF-like 1 [Cucurbita moschata]	[more]
XP_022983404.1	2.95e-69	87.60	protein RALF-like 1 [Cucurbita maxima]	[more]
XP_023529110.1	4.19e-69	87.60	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C017971.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	2.4e-25	52.89	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	4.5e-24	54.39	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9LUS7	3.8e-23	48.51	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	1.1e-22	51.85	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9MA62	6.7e-20	62.67	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of MELO3C017971.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQI0	1.38e-78	98.33	Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G...	[more]
A0A0A0KWI2	8.89e-71	89.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1	[more]
A0A6J1F244	7.08e-70	87.60	protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1	[more]
A0A6J1J798	1.43e-69	87.60	protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1	[more]
A0A6J5XM33	5.14e-39	56.67	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 S...	[more]

BLAST of MELO3C017971.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	1.7e-26	52.89	ralf-like 33	[more]
AT1G02900.1	3.2e-25	54.39	rapid alkalinization factor 1	[more]
AT3G16570.1	2.7e-24	48.51	rapid alkalinization factor 23	[more]
AT3G05490.1	4.7e-21	62.67	ralf-like 22	[more]
AT2G33775.1	6.0e-16	47.37	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 59..119 e-value: 5.0E-28 score: 97.9
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 8..120
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 8..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017971.jh1.t1	MELO3C017971.jh1.t1	mRNA