MELO3C017919.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017919.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	E3 ubiquitin-protein ligase RNF181-like protein
Location	chr07: 26683970 .. 26684641 (+)
RNA-Seq Expression	MELO3C017919.jh1
Synteny	MELO3C017919.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTACTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTGTTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTAGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCAATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTCTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

mRNA sequence

ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTACTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTGTTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTAGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCAATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTCTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

Coding sequence (CDS)

ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTACTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTGTTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTAGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCAATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTCTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

Protein sequence

MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLSVHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY

Homology

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BLAST of MELO3C017919.jh1 vs. NCBI nr
Match: XP_016901482.1 (PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo] >KAA0044413.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29540.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 455 bits (1170), Expect = 1.68e-161
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLS 60
           MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVIS+SSVSQRILYETQPIPFNNAHFYLS
Sbjct: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR
Sbjct: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180
           IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG
Sbjct: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180

Query: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223
           KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY
Sbjct: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223

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BLAST of MELO3C017919.jh1 vs. NCBI nr
Match: KGN52856.2 (hypothetical protein Csa_014722 [Cucumis sativus])

HSP 1 Score: 294 bits (752), Expect = 5.16e-98
Identity = 156/206 (75.73%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLS 60
           MSF ISSPI YLLN  GFGNGVLE+QLSY+ER ISVSS SQRILYETQP PFNNA FYLS
Sbjct: 1   MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQRILYETQPTPFNNALFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VH LQ PLF+IRQFL+SLNIRRE IARQIAS+VAHMCNGNTG NSNFYVIARVDLVR IR
Sbjct: 61  VHQLQHPLFHIRQFLYSLNIRRETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRAR--RGVVVGERLRKLKSEEEEGDCSVCLDELD 180
           IEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELD
Sbjct: 121 IEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELD 180

Query: 181 CGKREVIRIPCGHVYHESCIFEWLNN 204
           C KREVIRIPCGHVYHESCIF+WLN+
Sbjct: 181 CEKREVIRIPCGHVYHESCIFKWLNS 184

[Close]

BLAST of MELO3C017919.jh1 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 251 bits (642), Expect = 4.83e-81
Identity = 142/228 (62.28%), Postives = 165/228 (72.37%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFG--NGVLEIQLSYVERVISVSSVS---QRILYETQPIPFNNA 60
           MS A S+PIQY L GTG G  NGVLE+Q SY ER+ISVS V+    RIL+ET  IPF+NA
Sbjct: 1   MSSAASTPIQYRLYGTGSGTGNGVLEVQTSYFERMISVSPVTGRPPRILHETPRIPFHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNI---RRENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+H LQ+PLFYI QFL SLNI     E +ARQIASY+  M N N  R SNF +IA 
Sbjct: 61  LFYLSLHQLQNPLFYISQFLSSLNICPAACEIMARQIASYIDRMINEN--RESNFRIIAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRARRGV--VVGERLRKLKSEEEEGDC 180
           VD  R I +EE S++   GG  +  ETVVFDE P  RRGV  V  ER+R+LKS+EE GDC
Sbjct: 121 VDFSRVIWMEEHSIY---GGDAMAEETVVFDEAPPPRRGVEKVAVERVRELKSQEELGDC 180

Query: 181 SVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLD 218
            +CL+EL C KREVIRIPCGHVYHESC+F+WL  NNSCPLCR   PL+
Sbjct: 181 CICLEELSCEKREVIRIPCGHVYHESCVFKWLRKNNSCPLCRKPLPLN 223

[Close]

BLAST of MELO3C017919.jh1 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (578), Expect = 2.74e-71
Identity = 130/229 (56.77%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFG-NGVLEIQLSYVERVISVSSVSQR---ILYETQPIPFNNAH 60
           MSFAIS+PIQY L G+G G NG+LE+++S+ E++IS+S V+ R   IL++T  IP++NA 
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 60

Query: 61  FYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIARV 120
            YL++  LQ PLFYI QFL SLNIR    +++ARQIAS++  M + N  RN  F++IA V
Sbjct: 61  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRN--FHIIAEV 120

Query: 121 DLVRAI--RIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGV--VVGERLRKLKSEEEEG 180
           D +R I   +EE+SM   G G     ETVVFDE P A +RGV    GERL+  +  E+ G
Sbjct: 121 DFIRVIWLELEEQSM---GAGA---EETVVFDEAPPALKRGVGKARGERLKSEEKVEDLG 180

Query: 181 DCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPL 217
           DCS+CLDEL C KREVIRIPCGHVYHESCIF+WL N+NSCPLCR   PL
Sbjct: 181 DCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of MELO3C017919.jh1 vs. NCBI nr
Match: XP_004144954.1 (uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_020356 [Cucumis sativus])

HSP 1 Score: 221 bits (562), Expect = 7.30e-69
Identity = 126/223 (56.50%), Postives = 163/223 (73.09%), Query Frame = 0


Query: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISVSSVSQR---ILYETQPIPFNNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++ISVS ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180
           VD +R I +   SM   GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDFIRLIWLP--SM---GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180

Query: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 212
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 215

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BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 161 LKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNP 220
           LKSE  +  C+VC+DE + G  +V ++PC HV+H+ C+  WL  +NSCP+CR   P D+P
Sbjct: 209 LKSEMNQ--CAVCMDEFEDGS-DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 266

Query: 221 N 222
           +
Sbjct: 269 D 266

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BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot
Match: Q9VE61 (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN=CG7694 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 144 EVPRARRGVVVGERLRKLKSEEEEGD--CSVCLDELDCGKREVIRIPCGHVYHESCIFEW 203
           EVP A +  ++   + ++   +E GD  CSVC +  + G++  I +PC H +HE CI  W
Sbjct: 42  EVPEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRI-LPCKHEFHEECILLW 101

Query: 204 LNNNNSCPLCRTSFPLDNP 221
           L   NSCPLCR     D+P
Sbjct: 102 LKKTNSCPLCRYELETDDP 119

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot
Match: Q5M974 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 146 PRARRGVVVGERLRKLKSEEEEGD----CSVCLDELDCGKREVIRIPCGHVYHESCIFEW 205
           P A + VV  E L K+    E+ D    C VCL E + G+  V ++PC H++H SCI  W
Sbjct: 53  PPAAKKVV--ESLPKVTVTPEQADAALKCPVCLLEFEEGE-TVRQLPCEHLFHSSCILPW 112

Query: 206 LNNNNSCPLCRTSFPLDNP 221
           L   NSCPLCR   P D+P
Sbjct: 113 LGKTNSCPLCRHELPTDSP 128

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 146 PRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNN 205
           P A + VV       ++S + E  C VCL E +  +  VI +PC H++H +CI  WL+  
Sbjct: 64  PPAAKAVVESLPRTVIRSSKAELKCPVCLLEFE-EEETVIEMPCHHLFHSNCILPWLSKT 123

Query: 206 NSCPLCRTSFPLDN 220
           NSCPLCR   P D+
Sbjct: 124 NSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 158 LRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPL 217
           + K     E   C+VC+D+ + G  E  ++PC H+YH+ C+  WL  +NSCP+CR   P 
Sbjct: 212 ITKSNLNSEFNQCAVCMDDFEEG-TEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPT 271

Query: 218 DNPN 222
           D+P+
Sbjct: 272 DDPD 274

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TLM1 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001430 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 8.14e-162
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLS 60
           MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVIS+SSVSQRILYETQPIPFNNAHFYLS
Sbjct: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR
Sbjct: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180
           IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG
Sbjct: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180

Query: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223
           KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY
Sbjct: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DZR1 (uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 8.14e-162
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLS 60
           MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVIS+SSVSQRILYETQPIPFNNAHFYLS
Sbjct: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR
Sbjct: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180
           IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG
Sbjct: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCG 180

Query: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223
           KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY
Sbjct: 181 KREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY 223

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KYC0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 1.46e-109
Identity = 168/221 (76.02%), Postives = 179/221 (81.00%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISVSSVSQRILYETQPIPFNNAHFYLS 60
           MSF ISSPI YLLN  GFGNGVLE+QLSY+ER ISVSS SQRILYETQP PFNNA FYLS
Sbjct: 1   MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQRILYETQPTPFNNALFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VH LQ PLF+IRQFL+SLNIRRE IARQIAS+VAHMCNGNTG NSNFYVIARVDLVR IR
Sbjct: 61  VHQLQHPLFHIRQFLYSLNIRRETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRAR--RGVVVGERLRKLKSEEEEGDCSVCLDELD 180
           IEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELD
Sbjct: 121 IEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELD 180

Query: 181 CGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDN 219
           C KREVIRIPCGHVYHESCIF+WLN++NSCPLCR+SFPL N
Sbjct: 181 CEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 1.33e-71
Identity = 130/229 (56.77%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFG-NGVLEIQLSYVERVISVSSVSQR---ILYETQPIPFNNAH 60
           MSFAIS+PIQY L G+G G NG+LE+++S+ E++IS+S V+ R   IL++T  IP++NA 
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 60

Query: 61  FYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIARV 120
            YL++  LQ PLFYI QFL SLNIR    +++ARQIAS++  M + N  RN  F++IA V
Sbjct: 61  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRN--FHIIAEV 120

Query: 121 DLVRAI--RIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGV--VVGERLRKLKSEEEEG 180
           D +R I   +EE+SM   G G     ETVVFDE P A +RGV    GERL+  +  E+ G
Sbjct: 121 DFIRVIWLELEEQSM---GAGA---EETVVFDEAPPALKRGVGKARGERLKSEEKVEDLG 180

Query: 181 DCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPL 217
           DCS+CLDEL C KREVIRIPCGHVYHESCIF+WL N+NSCPLCR   PL
Sbjct: 181 DCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 1.33e-71
Identity = 130/229 (56.77%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 1   MSFAISSPIQYLLNGTGFG-NGVLEIQLSYVERVISVSSVSQR---ILYETQPIPFNNAH 60
           MSFAIS+PIQY L G+G G NG+LE+++S+ E++IS+S V+ R   IL++T  IP++NA 
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 60

Query: 61  FYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIARV 120
            YL++  LQ PLFYI QFL SLNIR    +++ARQIAS++  M + N  RN  F++IA V
Sbjct: 61  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRN--FHIIAEV 120

Query: 121 DLVRAI--RIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGV--VVGERLRKLKSEEEEG 180
           D +R I   +EE+SM   G G     ETVVFDE P A +RGV    GERL+  +  E+ G
Sbjct: 121 DFIRVIWLELEEQSM---GAGA---EETVVFDEAPPALKRGVGKARGERLKSEEKVEDLG 180

Query: 181 DCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPL 217
           DCS+CLDEL C KREVIRIPCGHVYHESCIF+WL N+NSCPLCR   PL
Sbjct: 181 DCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of MELO3C017919.jh1 vs. TAIR 10
Match: AT4G12190.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 151 GVVVGERLRKLKSEEEEGDCSVCLDELDCG--KREVIRIPCGHVYHESCIFEWLNNNNSC 210
           G +  E L+ LK E E   CS+CL+ L  G   R++ R+ C HV+H  C+ EWL   N+C
Sbjct: 5   GRIKTEELKSLKMETE--PCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTC 64

Query: 211 PLCRT 214
           PLCRT
Sbjct: 65  PLCRT 67

[Close]

BLAST of MELO3C017919.jh1 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 161 LKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNP 220
           LKSE  +  C+VC+DE + G  +V ++PC HV+H+ C+  WL  +NSCP+CR   P D+P
Sbjct: 209 LKSEMNQ--CAVCMDEFEDGS-DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 266

Query: 221 N 222
           +
Sbjct: 269 D 266

[Close]

BLAST of MELO3C017919.jh1 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 152 VVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIP-CGHVYHESCIFEWLNNNNSCPL 211
           +V  +R+     EEE+  CS+C+++      ++IR+P C H++H+ C+FEWL   NSCPL
Sbjct: 141 LVEEQRVESADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPL 200

Query: 212 CR 213
           CR
Sbjct: 201 CR 202

[Close]

BLAST of MELO3C017919.jh1 vs. TAIR 10
Match: AT4G05350.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-11
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 151 GVVVGERLRKLKSEEEEGDCSVCLDELDCG--KREVIRIPCGHVYHESCIFEWLNNNNSC 210
           G +  E  + LK E E   CS+CL+ L  G   R+V R+ C HV+H  C+ EWL   N+C
Sbjct: 140 GRMKAEEFKSLKMETE--PCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTC 199

Query: 211 PLCRT 214
           PLCRT
Sbjct: 200 PLCRT 202

[Close]

BLAST of MELO3C017919.jh1 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 159 RKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLD 218
           R+   EEEE +C +CL   + G++  +  PC H YH  C+  WL   +SCPLCR S  +D
Sbjct: 96  RERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVD 155

Query: 219 N 220
           +
Sbjct: 156 S 156

The following BLAST results are available for this feature:

BLAST of MELO3C017919.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901482.1	1.68e-161	99.55	PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo] >KAA0044413.1 E3 ...	[more]
KGN52856.2	5.16e-98	75.73	hypothetical protein Csa_014722 [Cucumis sativus]	[more]
XP_038883574.1	4.83e-81	62.28	E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]	[more]
XP_016899530.1	2.74e-71	56.77	PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 ...	[more]
XP_004144954.1	7.30e-69	56.50	uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical ...	[more]

BLAST of MELO3C017919.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	3.1e-10	45.90	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9VE61	1.2e-09	39.24	E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN...	[more]
Q5M974	1.2e-09	44.30	E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 ...	[more]
Q6AXU4	1.5e-09	40.54	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
P0CH30	2.0e-09	39.06	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of MELO3C017919.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLM1	8.14e-162	99.55	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DZR1	8.14e-162	99.55	uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=...	[more]
A0A0A0KYC0	1.46e-109	76.02	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 P...	[more]
A0A5D3E1S5	1.33e-71	56.77	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUZ4	1.33e-71	56.77	E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ...	[more]

BLAST of MELO3C017919.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12190.1	1.7e-11	46.15	RING/U-box superfamily protein	[more]
AT3G19950.1	2.2e-11	45.90	RING/U-box superfamily protein	[more]
AT5G37200.1	2.2e-11	41.94	RING/U-box superfamily protein	[more]
AT4G05350.1	3.7e-11	46.15	RING/U-box superfamily protein	[more]
AT3G11110.1	1.8e-10	40.98	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 170..211 e-value: 5.0E-8 score: 42.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 169..212 e-value: 7.6E-13 score: 48.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 170..212 score: 13.374458
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 140..217 e-value: 4.8E-19 score: 69.8
None	No IPR available	PANTHER	PTHR22765:SF329	SUBFAMILY NOT NAMED	coord: 4..213
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 4..213
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 164..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017919.jh1.t1	MELO3C017919.jh1.t1	mRNA