MELO3C017858.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017858.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Ribonuclease 3-like protein 1
Location	chr07: 26330331 .. 26333514 (+)
RNA-Seq Expression	MELO3C017858.jh1
Synteny	MELO3C017858.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAACAATGAGTTGGTTTATGAATACTCTGTTATTCCAATGGTCAACCAAACCAACCCATTTACCCTTGTACTTTCTAGAATGCTCGTTTCTTCTTTTCTTTTCGGGAATAGTTTTTTTGAAACGAATGATCCCAAATCCTCACCACCACACCACAACAAATCACAAAATACATTTAAAATCTCTCGATCTCTTTATTACTTACTCACTTCATGCATATTAAGAAACTTCGGACATAATCTATTTTCCACTACGCACCTATTGGAAAATGTAATTTTTCTAAGTATATTGAATTACCATATGATAGTTTTGATATGATTGTAACACCTCAACTATAATTAATTACCCTTTTTTTTCTTGTAAATGAGAGTGTAATGAGTTCACTTCAATTTTGATTCATTTTATGGATGAAATTAAAGTGTAATGAGTCTTATTCACTTCTTACCCATCCCCCATGGAACCTTTAACACCATCGAATCACTTTTCAGATAAAGAAGAAGAAGAAGAAGAACAACAACAACAACCAACCAAGAATTTATTCCGATCATCGAAAGGCCTGAATCTGCACAACCTATCCCATTTCTTGGATTGTATATCAACACTTTCTTGCTCTGAATTTGATTGATGAGACACTACACAGAAATCGTCGGAGCAGAGCGAAAGAATCGAGGAATTCAGATGGAGAAGAACAATCCTTCTTGTCCTCCAAGATTAAATATCAATCTTAAAAATCTTCCTCCAATTAATAACCCGCGCAATGTTACTGGGACTCACTCCTCGATTCCGGTAAAACTCTGTTGATTTACTGCGGTTGTATTCGATTTTTCTTCGGGATTTGAAACCCTTTTTGACTTTCGATCTGACTTGTTTCAGGCTAAATTTGAGAAATCTAGGTATATTAGGCGCGTTCCTCAGTTTATACCGTTTGATCACCGGCCGGAAATAAGGTCGAATAATTACCCTGGCTTGCCGGCGATGAAACTAGCGTGTTCTGATTCCGCTCGAGCTATGAACACGAAGACGATTCCGGTGGCTCCGTCGGCGGATTACTTCGTTCAAAAGAAAGATAATTGCAAGGATTTAGCTTCGAGGTGTAGTTGTTGCAGACATGGCTCGACCAAAGAAGGTGCCGGTTTAAACCTAGTTCCTCAACTTCATTGATTGTTATTTCGAATTCGAGATAGATGATTCTTGTTGTGTGTTATCATTTTCGGTTATTGTTGTTTTCTTCGCGATTTTCTTCCAACAATTGATTGTTCAACTGAACTCACATGCATTTCATCAGGAACACTGTCTTTATCGCCTGTTTATTACCCCTATTCACTTCCCAATTCGTCATTAATATTTGTCCATTAATTTCAAAGTGCAGTTTAAAAAGGAAAGAAAGAAAATGTAAGGATTTGGTCTCTAAAAATTTTCCAAAACAAAACTCTGGATCAAAACCATTTTCTGGATCATGTTTGAACAGTTTGATTTCTTTCAATTTTTTCTCTCTTGTTTTTCTTTTGATTCTTCTCAGGATGACTTGTTTTCAGTAATGAATGAAGTTGTGTGCGAATGATAGCATGCATTAGATTTCATAAATCATTCGATCACAATCCCTAGTGGTTGAAAGTTTTGAGAGTTGTTTCTGAATTTATGATTGTTTCCTCTTATTAATTTTTAATTAGTCAGAGAAACACTCATCAAATTCTAAAACAAAAATGTTTTTGAAAACCATTTGTTTAGTTTTCAAAACTCTGACTTGTTTTATTTTAAATATTAATAGAAAGTGAATTACAAATATAGAAACTTATGGATGTTATGAGTATTTATAAACTTGTCGTTATCAAATGACTTATAATTTATTACTTTCTCTTGCTCCAAAGAACAAGTTATGATGCTCTGCTCTTGAGAGTTGGAATCTCAAAATATCACTTCGAGTATGTAAAGAGGAGACTAAATGATTTAAAATCGTTGTTGTTCTTTGGAGTTGAGCACATAAGCTAGGAGTGCAAGGAGTGAGCCTCATTCTCCATTTACCAAATAAAATAAATCAGTTATTCAAACATGTTTATACCTTTTTTCCCCTTAATTAAAAGGATGGAATATAATTTTGCAACTTAAATATCCAAAAGTGCTTAAGCTTTTTCACTTTGATGGCTTACTTTATCTTCGTTTAAGTTGGATGAGGAAGACTGCTTGTTGCCTCTCTGATTCCCATGAGCGTTGCCATGGCGCTTCAGAAATTTTGATTTTGACTACTCAAAGTTTGCTCTAATGGTTTGGCTTCACCCTTTTTCATTTTAGGTACTCCAGAAAAGAGAGCGGCAAAGTCCCTTCTATTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTATTTGAATGCTGTGAAGAAGAAGGTCCCAGCCATGCAAGAAAGTAAGCTCAATATAACTCTCATCAACATAAGTAATACACTTGCGAACTTACAGATTACTTGTTATGCCTTTTGGTCTTGTAGATTAACCGATAGTACTCAGAAGTTGCCCTCTTCTAACAACTACTTTTTGAAGATTTTATAGCGTTTACAAGCCTTACTTGAACAAAATTTGTTATTATAAGTCGTACAACTCTGTTTCTTCTTTTTATATTCAAAACGGGTACAATTAGATGGCACCATGGAATCAGCTGATGAAGGTTTCTTTTTAGCTATGTTTGGATTTGACATGTCAATATAGTATCTGTACTGTGCGAACATGAGCAAGAATATAGATCGGATCGAAAGGAAGAAAAAAACACATCCGAGCAAAGAATCAAATTAGTAACTAGCTTCATTTATGGAAAACAGAGTTATTTGATGGGATTTTAGGAATTGATGCAAACTTTTGATTTTGATTCAGGTATAGATTCAAGGTTAGTATTGAAATGAAGGGAGATTGTGAAGCAGTTGTGGAATGCTATGGAAACCTTCAAACAAGAAAGAAAATGGCAGCAGAGCATGCAGCCGAAGGAGCATTATGGTACTTAAAGAATTTGGGATATCGTTTTGAAAGATGATAATTAGGAATTGTAAAGAACTAGAAATGAGAAATGGAAAATGAGTAAATCATTTTTTTGACCTAAACTCTTTCCATCGAATACAGTTTTTATTCAACCTGCAAAGAACTAGAATAAAGGTTTTTCTCGACGTCTACGTAAATAGAAGAACTTCTACA

mRNA sequence

AAAAAAGAACAATGAGTTGGTTTATGAATACTCTGTTATTCCAATGGTCAACCAAACCAACCCATTTACCCTTGTACTTTCTAGAATGCTCGTTTCTTCTTTTCTTTTCGGGAATAGTTTTTTTGAAACGAATGATCCCAAATCCTCACCACCACACCACAACAAATCACAAAATACATTTAAAATCTCTCGATCTCTTTATTACTTACTCACTTCATGCATATTAAGAAACTTCGGACATAATCTATTTTCCACTACGCACCTATTGGAAAATGTAATTTTTCTAAGTATATTGAATTACCATATGATAGTTTTGATATGATTGTAACACCTCAACTATAATTAATTACCCTTTTTTTTCTTGTAAATGAGAGTGTAATGAGTTCACTTCAATTTTGATTCATTTTATGGATGAAATTAAAGTGTAATGAGTCTTATTCACTTCTTACCCATCCCCCATGGAACCTTTAACACCATCGAATCACTTTTCAGATAAAGAAGAAGAAGAAGAAGAACAACAACAACAACCAACCAAGAATTTATTCCGATCATCGAAAGGCCTGAATCTGCACAACCTATCCCATTTCTTGGATTGTATATCAACACTTTCTTGCTCTGAATTTGATTGATGAGACACTACACAGAAATCGTCGGAGCAGAGCGAAAGAATCGAGGAATTCAGATGGAGAAGAACAATCCTTCTTGTCCTCCAAGATTAAATATCAATCTTAAAAATCTTCCTCCAATTAATAACCCGCGCAATGTTACTGGGACTCACTCCTCGATTCCGGCTAAATTTGAGAAATCTAGGTATATTAGGCGCGTTCCTCAGTTTATACCGTTTGATCACCGGCCGGAAATAAGGTCGAATAATTACCCTGGCTTGCCGGCGATGAAACTAGCGTGTTCTGATTCCGCTCGAGCTATGAACACGAAGACGATTCCGGTGGCTCCGTCGGCGGATTACTTCGTTCAAAAGAAAGATAATTGCAAGGATTTAGCTTCGAGGTGTAGTTGTTGCAGACATGGCTCGACCAAAGAAGGTGCCGGTACTCCAGAAAAGAGAGCGGCAAAGTCCCTTCTATTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTATTTGAATGCTGTGAAGAAGAAGGTCCCAGCCATGCAAGAAAGTATAGATTCAAGGTTAGTATTGAAATGAAGGGAGATTGTGAAGCAGTTGTGGAATGCTATGGAAACCTTCAAACAAGAAAGAAAATGGCAGCAGAGCATGCAGCCGAAGGAGCATTATGGTACTTAAAGAATTTGGGATATCGTTTTGAAAGATGATAATTAGGAATTGTAAAGAACTAGAAATGAGAAATGGAAAATGAGTAAATCATTTTTTTGACCTAAACTCTTTCCATCGAATACAGTTTTTATTCAACCTGCAAAGAACTAGAATAAAGGTTTTTCTCGACGTCTACGTAAATAGAAGAACTTCTACA

Coding sequence (CDS)

ATGAGACACTACACAGAAATCGTCGGAGCAGAGCGAAAGAATCGAGGAATTCAGATGGAGAAGAACAATCCTTCTTGTCCTCCAAGATTAAATATCAATCTTAAAAATCTTCCTCCAATTAATAACCCGCGCAATGTTACTGGGACTCACTCCTCGATTCCGGCTAAATTTGAGAAATCTAGGTATATTAGGCGCGTTCCTCAGTTTATACCGTTTGATCACCGGCCGGAAATAAGGTCGAATAATTACCCTGGCTTGCCGGCGATGAAACTAGCGTGTTCTGATTCCGCTCGAGCTATGAACACGAAGACGATTCCGGTGGCTCCGTCGGCGGATTACTTCGTTCAAAAGAAAGATAATTGCAAGGATTTAGCTTCGAGGTGTAGTTGTTGCAGACATGGCTCGACCAAAGAAGGTGCCGGTACTCCAGAAAAGAGAGCGGCAAAGTCCCTTCTATTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTATTTGAATGCTGTGAAGAAGAAGGTCCCAGCCATGCAAGAAAGTATAGATTCAAGGTTAGTATTGAAATGAAGGGAGATTGTGAAGCAGTTGTGGAATGCTATGGAAACCTTCAAACAAGAAAGAAAATGGCAGCAGAGCATGCAGCCGAAGGAGCATTATGGTACTTAAAGAATTTGGGATATCGTTTTGAAAGATGA

Protein sequence

MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKSRYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDNCKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER

Homology

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BLAST of MELO3C017858.jh1 vs. NCBI nr
Match: XP_008454206.1 (PREDICTED: uncharacterized protein LOC103494682 isoform X1 [Cucumis melo] >KAA0044459.1 ribonuclease 3-like protein 1 [Cucumis melo var. makuwa] >TYK29586.1 ribonuclease 3-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 474 bits (1221), Expect = 4.48e-169
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60
           MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS
Sbjct: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60

Query: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120
           RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN
Sbjct: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120

Query: 121 CKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180
           CKDLASRCSCCRHGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY
Sbjct: 121 CKDLASRCSCCRHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180

Query: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER
Sbjct: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 228

[Close]

BLAST of MELO3C017858.jh1 vs. NCBI nr
Match: XP_004152191.1 (uncharacterized protein LOC101212514 [Cucumis sativus] >KGN52916.1 hypothetical protein Csa_014441 [Cucumis sativus])

HSP 1 Score: 413 bits (1062), Expect = 7.54e-145
Identity = 204/231 (88.31%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPP-RLNINLKNLPPINNPRNVTGTHSSIPAKFEK 60
           MRHY++IVG ERKNRGIQME NNPSCPP RLNINLKNLPPINNPRNV+G+HSSIPAKFEK
Sbjct: 1   MRHYSDIVGPERKNRGIQME-NNPSCPPPRLNINLKNLPPINNPRNVSGSHSSIPAKFEK 60

Query: 61  SRYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKD 120
           SRYIRRVPQF+P DHRPEIRSN+Y GLP MKLA SDSARA+NTKT PVAPSAD FV+KKD
Sbjct: 61  SRYIRRVPQFMPSDHRPEIRSNDYAGLP-MKLAYSDSARALNTKTFPVAPSADSFVRKKD 120

Query: 121 NCKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 180
            CKDLASRCSCCRH STKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHA+K
Sbjct: 121 TCKDLASRCSCCRHDSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKK 180

Query: 181 YRFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           YRFKV IEMKGDCEAVVECYGNLQTRKK+AAEHAAEGALWYL +LGYRF+R
Sbjct: 181 YRFKVRIEMKGDCEAVVECYGNLQTRKKVAAEHAAEGALWYLNHLGYRFKR 227

[Close]

BLAST of MELO3C017858.jh1 vs. NCBI nr
Match: XP_016901448.1 (PREDICTED: uncharacterized protein LOC103494682 isoform X2 [Cucumis melo])

HSP 1 Score: 369 bits (946), Expect = 1.19e-127
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60
           MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS
Sbjct: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60

Query: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120
           RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN
Sbjct: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120

Query: 121 CKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 179
           CKDLASRCSCCRHGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK
Sbjct: 121 CKDLASRCSCCRHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 177

[Close]

BLAST of MELO3C017858.jh1 vs. NCBI nr
Match: XP_038878769.1 (ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida] >XP_038878776.1 ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 342 bits (877), Expect = 9.00e-117
Identity = 178/226 (78.76%), Postives = 191/226 (84.51%), Query Frame = 0


Query: 5   TEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKSRYIR 64
           TEIV AERKNRG QME N  SCP RLN NLKNLPPINN    TG HSSI AKFEKSRYIR
Sbjct: 4   TEIVEAERKNRGNQME-NTHSCPRRLNFNLKNLPPINNSLIGTGNHSSISAKFEKSRYIR 63

Query: 65  RVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDNCKDL 124
           RVPQFIP +HRP    N Y GLP MK ACS SARA+N+KTIP APS D FVQKKDN +++
Sbjct: 64  RVPQFIPQNHRP----NEYAGLP-MKPACSGSARALNSKTIPEAPS-DSFVQKKDNSQEI 123

Query: 125 ASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKV 184
           ASR SCC HGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHA+KYRFKV
Sbjct: 124 ASRSSCCGHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKV 183

Query: 185 SIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           ++EMKG  E V+ECYGNLQTRKK+AAEHAAEGA+WYLKNLGY F+R
Sbjct: 184 TVEMKGASETVLECYGNLQTRKKVAAEHAAEGAIWYLKNLGYCFKR 220

[Close]

BLAST of MELO3C017858.jh1 vs. NCBI nr
Match: XP_038878786.1 (ribonuclease 3-like protein 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 323 bits (829), Expect = 1.54e-109
Identity = 169/215 (78.60%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 5   TEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKSRYIR 64
           TEIV AERKNRG QME N  SCP RLN NLKNLPPINN    TG HSSI AKFEKSRYIR
Sbjct: 4   TEIVEAERKNRGNQME-NTHSCPRRLNFNLKNLPPINNSLIGTGNHSSISAKFEKSRYIR 63

Query: 65  RVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDNCKDL 124
           RVPQFIP +HRP    N Y GLP MK ACS SARA+N+KTIP APS D FVQKKDN +++
Sbjct: 64  RVPQFIPQNHRP----NEYAGLP-MKPACSGSARALNSKTIPEAPS-DSFVQKKDNSQEI 123

Query: 125 ASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKV 184
           ASR SCC HGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHA+KYRFKV
Sbjct: 124 ASRSSCCGHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKV 183

Query: 185 SIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALW 219
           ++EMKG  E V+ECYGNLQTRKK+AAEHAAEGA+W
Sbjct: 184 TVEMKGASETVLECYGNLQTRKKVAAEHAAEGAIW 209

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy Swiss-Prot
Match: A7LFZ6 (Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL4 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 43/81 (53.09%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 146  RAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECYGNLQTR 205
            + A+S LFE+C AN+W+PP F+ C+EEGPSH RK+ +KV +E+KG    ++EC+ + + +
Sbjct: 1568 KTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQ 1627

Query: 206  KKMAAEHAAEGALWYLKNLGY 227
            KK A EHAA+GALW LK LG+
Sbjct: 1628 KKAAQEHAAQGALWCLKQLGH 1648

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy Swiss-Prot
Match: P84634 (Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 140  AGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECY 199
            AG P  + AKSLL E C AN W+PP FECCEEEGP H + + +KV +E++      +ECY
Sbjct: 1614 AGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECY 1673

Query: 200  GNLQTRKKMAAEHAAEGALWYLKNLGY 227
            G  +  KK AAEHAA+ A+W LK+ G+
Sbjct: 1674 GEARATKKGAAEHAAQAAIWCLKHSGF 1700

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy Swiss-Prot
Match: Q9M8N2 (Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RTL1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-19
Identity = 39/90 (43.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 136 TKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDC-EA 195
           +K+      + +AKS+L E+C +  W+PP++ECC  +GP H R + +KV +E++    + 
Sbjct: 103 SKDDESKTRRGSAKSVLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKT 162

Query: 196 VVECYGNLQTRKKMAAEHAAEGALWYLKNL 225
           V+EC+G+ + +KK AAEHAAEGALWYL+++
Sbjct: 163 VLECFGDPRRKKKAAAEHAAEGALWYLEHV 192

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy Swiss-Prot
Match: Q9FKF0 (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.4e-04
Identity = 23/63 (36.51%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 152 LFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECYGNLQTRKKMAAE 211
           L EICT N W  P+F   EE+GP +  K+   V IE+  + E      G+++++KK A  
Sbjct: 312 LIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIP-NIEGTFHMKGDIKSKKKQAEN 371

Query: 212 HAA 215
             A
Sbjct: 372 SLA 373

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E0Z9 (Ribonuclease 3-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001930 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 2.17e-169
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60
           MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS
Sbjct: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60

Query: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120
           RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN
Sbjct: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120

Query: 121 CKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180
           CKDLASRCSCCRHGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY
Sbjct: 121 CKDLASRCSCCRHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180

Query: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER
Sbjct: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 228

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BXK0 (uncharacterized protein LOC103494682 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494682 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 2.17e-169
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60
           MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS
Sbjct: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60

Query: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120
           RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN
Sbjct: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120

Query: 121 CKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180
           CKDLASRCSCCRHGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY
Sbjct: 121 CKDLASRCSCCRHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKY 180

Query: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER
Sbjct: 181 RFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 228

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KYI7 (DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006230 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 3.65e-145
Identity = 204/231 (88.31%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPP-RLNINLKNLPPINNPRNVTGTHSSIPAKFEK 60
           MRHY++IVG ERKNRGIQME NNPSCPP RLNINLKNLPPINNPRNV+G+HSSIPAKFEK
Sbjct: 1   MRHYSDIVGPERKNRGIQME-NNPSCPPPRLNINLKNLPPINNPRNVSGSHSSIPAKFEK 60

Query: 61  SRYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKD 120
           SRYIRRVPQF+P DHRPEIRSN+Y GLP MKLA SDSARA+NTKT PVAPSAD FV+KKD
Sbjct: 61  SRYIRRVPQFMPSDHRPEIRSNDYAGLP-MKLAYSDSARALNTKTFPVAPSADSFVRKKD 120

Query: 121 NCKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 180
            CKDLASRCSCCRH STKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHA+K
Sbjct: 121 TCKDLASRCSCCRHDSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKK 180

Query: 181 YRFKVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 230
           YRFKV IEMKGDCEAVVECYGNLQTRKK+AAEHAAEGALWYL +LGYRF+R
Sbjct: 181 YRFKVRIEMKGDCEAVVECYGNLQTRKKVAAEHAAEGALWYLNHLGYRFKR 227

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DZP1 (uncharacterized protein LOC103494682 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494682 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 5.76e-128
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60
           MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS
Sbjct: 1   MRHYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKS 60

Query: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120
           RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN
Sbjct: 61  RYIRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDN 120

Query: 121 CKDLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 179
           CKDLASRCSCCRHGSTKEG  TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK
Sbjct: 121 CKDLASRCSCCRHGSTKEG--TPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARK 177

[Close]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GW48 (ribonuclease 3-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458030 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 2.82e-94
Identity = 146/224 (65.18%), Postives = 169/224 (75.45%), Query Frame = 0


Query: 3   HYTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKSRY 62
           HY EIVG ERKNR  QME N PSCP  +N+NLKNLPPI+NP      HSSIPAKFEKSRY
Sbjct: 6   HYREIVGEERKNRENQME-NTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRY 65

Query: 63  IRRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDNCK 122
           I RVPQF+P +H P++R N Y G+P M  AC DSAR+ N +T P         ++K+N  
Sbjct: 66  IGRVPQFMPPNHSPDVRPNEYDGVP-MNPACFDSARSPNARTTPK--------ERKENFG 125

Query: 123 DLASRCSCCRHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRF 182
           D ASR S C H STKEG  T  K++AKSLL+EICTANHW+PPLFECCEEEGPSHA+KY F
Sbjct: 126 DSASRSSGCSHDSTKEG--TSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTF 185

Query: 183 KVSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGY 226
           KV +EMKGDC   +ECYG  QTRKK+AAE AAEGA+WYLK+LGY
Sbjct: 186 KVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY 217

[Close]

BLAST of MELO3C017858.jh1 vs. TAIR 10
Match: AT5G20320.1 (dicer-like 4 )

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-23
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 140  AGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECY 199
            AG P  + AKSLL E C AN W+PP FECCEEEGP H + + +KV +E++      +ECY
Sbjct: 1614 AGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECY 1673

Query: 200  GNLQTRKKMAAEHAAEGALWYLKNLGY 227
            G  +  KK AAEHAA+ A+W LK+ G+
Sbjct: 1674 GEARATKKGAAEHAAQAAIWCLKHSGF 1700

[Close]

BLAST of MELO3C017858.jh1 vs. TAIR 10
Match: AT5G20320.2 (dicer-like 4 )

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-23
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 140  AGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCEAVVECY 199
            AG P  + AKSLL E C AN W+PP FECCEEEGP H + + +KV +E++      +ECY
Sbjct: 1600 AGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECY 1659

Query: 200  GNLQTRKKMAAEHAAEGALWYLKNLGY 227
            G  +  KK AAEHAA+ A+W LK+ G+
Sbjct: 1660 GEARATKKGAAEHAAQAAIWCLKHSGF 1686

[Close]

BLAST of MELO3C017858.jh1 vs. TAIR 10
Match: AT1G80650.1 (RNAse THREE-like protein 1 )

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-20
Identity = 39/90 (43.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 136 TKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDC-EA 195
           +K+      + +AKS+L E+C +  W+PP++ECC  +GP H R + +KV +E++    + 
Sbjct: 103 SKDDESKTRRGSAKSVLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKT 162

Query: 196 VVECYGNLQTRKKMAAEHAAEGALWYLKNL 225
           V+EC+G+ + +KK AAEHAAEGALWYL+++
Sbjct: 163 VLECFGDPRRKKKAAAEHAAEGALWYLEHV 192

[Close]

BLAST of MELO3C017858.jh1 vs. TAIR 10
Match: AT4G00420.1 (Double-stranded RNA-binding domain (DsRBD)-containing protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-19
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 132 RHGSTKEGAGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGD 191
           R  +T+      ++ +AKS L+ +C+  HW+ PL+E    EGP H + +  KV++EMK D
Sbjct: 68  RPHTTEPTTEETQRSSAKSQLYNLCSVRHWKAPLYEYI-AEGPCHMKIFTGKVTVEMKED 127

Query: 192 CE-AVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFE 230
               V+EC+GN Q +KK+AAE AAE ALWYLKN+GY  +
Sbjct: 128 SRITVLECFGNPQYKKKIAAEQAAEAALWYLKNVGYTLQ 165

[Close]

BLAST of MELO3C017858.jh1 vs. TAIR 10
Match: AT4G00420.2 (Double-stranded RNA-binding domain (DsRBD)-containing protein )

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-19
Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 144 EKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFKVSIEMKGDCE-AVVECYGNL 203
           ++ +AKS L+ +C+  HW+ PL+E    EGP H + +  KV++EMK D    V+EC+GN 
Sbjct: 81  QRSSAKSQLYNLCSVRHWKAPLYEYI-AEGPCHMKIFTGKVTVEMKEDSRITVLECFGNP 140

Query: 204 QTRKKMAAEHAAEGALWYLKNLGYRFE 230
           Q +KK+AAE AAE ALWYLKN+GY  +
Sbjct: 141 QYKKKIAAEQAAEAALWYLKNVGYTLQ 166

The following BLAST results are available for this feature:

BLAST of MELO3C017858.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454206.1	4.48e-169	99.13	PREDICTED: uncharacterized protein LOC103494682 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004152191.1	7.54e-145	88.31	uncharacterized protein LOC101212514 [Cucumis sativus] >KGN52916.1 hypothetical ...	[more]
XP_016901448.1	1.19e-127	98.88	PREDICTED: uncharacterized protein LOC103494682 isoform X2 [Cucumis melo]	[more]
XP_038878769.1	9.00e-117	78.76	ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida] >XP_038878776.1 rib...	[more]
XP_038878786.1	1.54e-109	78.60	ribonuclease 3-like protein 1 isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C017858.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7LFZ6	1.0e-21	53.09	Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]
P84634	1.4e-21	51.72	Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2	[more]
Q9M8N2	3.7e-19	43.33	Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RTL1 PE=2 SV=1	[more]
Q9FKF0	4.4e-04	36.51	Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1	[more]

BLAST of MELO3C017858.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0Z9	2.17e-169	99.13	Ribonuclease 3-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BXK0	2.17e-169	99.13	uncharacterized protein LOC103494682 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KYI7	3.65e-145	88.31	DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006230 PE=4 S...	[more]
A0A1S4DZP1	5.76e-128	98.88	uncharacterized protein LOC103494682 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GW48	2.82e-94	65.18	ribonuclease 3-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MELO3C017858.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20320.1	9.7e-23	51.72	dicer-like 4	[more]
AT5G20320.2	9.7e-23	51.72	dicer-like 4	[more]
AT1G80650.1	2.6e-20	43.33	RNAse THREE-like protein 1	[more]
AT4G00420.1	1.7e-19	45.45	Double-stranded RNA-binding domain (DsRBD)-containing protein	[more]
AT4G00420.2	2.2e-19	49.43	Double-stranded RNA-binding domain (DsRBD)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 148..222 e-value: 1.3E-8 score: 44.6
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 147..223 score: 9.294987
None	No IPR available	GENE3D	3.30.160.20		coord: 154..223 e-value: 1.1E-21 score: 79.1
None	No IPR available	PFAM	PF14709	DND1_DSRM	coord: 148..222 e-value: 2.6E-14 score: 53.2
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 11..230
None	No IPR available	PANTHER	PTHR14950:SF67	DOUBLE-STRANDED RNA-BINDING DOMAIN (DSRBD)-CONTAINING PROTEIN	coord: 11..230
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 148..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017858.jh1.t1	MELO3C017858.jh1.t1	mRNA