MELO3C017708 (gene) Melon (DHL92) v4

Overview
NameMELO3C017708
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDisease resistance protein RGA2-like
Locationchr07: 24162725 .. 24164754 (+)
RNA-Seq ExpressionMELO3C017708
SyntenyMELO3C017708
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAATCATTGGCTGCGGGGAGCTTCGGGGGGATCGGAATTCGATCCTCCGATGGATAATTCCTTGCAGATTAAGAGAATCTGACAATGAACAAAGACATCTCAGAAAGCCAGTTCCTCATTTATCCCGTAGGTTCTTGGCTCGCTATGATGTCTACATTTTCTACTTGTTTCTCATGAACTCGATCATCCTCCTCTGCCTTCGGATCTCTTTTTTTTTTTTTTTTGTCTTTTGATTTAGGGTTTATGGAATAAAATACTTGCTGATTTGTTTTCGTCGTTTTTGGATTATGATTCCGATTTTCCAACGAGATTTGTTTTTCGTTTTCTTATTCTCTCTTTTAAATGGTAGACTTCTCGCATCTTGTTCAGGTTGAAGATGTATACTTTTATATCGAGCTATTTTCACATTGACTTAGACTTAGACGGATTATCAACGTCCTAATAATAATTGAAATAGCCCAAATGCGAGAAAAATATAAAAACTTTGCCTCTTAATCATTTCTTCTCTACATGAATATAATTGAGTGCATAGAGTATCAATTCATTTAAATTAAATAACATGGTAATTATCATTAAACAATGTAGATTTTTTACATAATCAAGGCAGCCCACTTGCTTTGTTTTTCTTCTGCACATTCAAAGTTTCCTCTGTTTTTCAAAACATTATGTGCGCTGTGGTGTTTGAATCTTCTTCCTCAATTTACTTGGGAGTTCTTAGGGAAAATATGGCTGAATTCCCGTGGACATATGGTTCGCAAGAAGTCTTGAAGAAGGTACTCAAAGTTGCATCTGAGGAAATTGGTGTGGCTTTGGGCTTTAAGAAGGAGCGCTCCAAATTGACAAAATGGTTACACAAATCTGAAGTCGTTTTAAGAGATATCAACACTAAGAAATTGCGCCATGATTCTGTGAGAATGTGGGTGGAGGATCTTTAACATCTTGTTTACGAGGCCGATGATCTGTTGAATGAGCTTGTTTATGAAGATCTTTGACGCAAAGTGGAAACAGAGAAAACAAAGAAAAAGGTCCACAGTTTCTTTTCATCTTCCCATAATCCTTTTTTGGTTTGTAGAAATATGGCCAAAAGAATGAAGGTCATTACTGAAACTGTGTAAACATTACTATGGGTCAAGTCCTTTAGGCTTGGTTGTATGGTTAAGGAGAAATGCATTGAAACACATAAGAACGTTGATCTAATTAAGCAGATTCGAGAGACAACATCAAATCTTAATTTTGATGAAGTTATAATAGGAAGAGAAGTTGAAGTTTCAAACATAGTGAGTTGGTGATTGAATTTAGCAAAGAACATCAAATGTCCGTCATACCCATTGTCGGTATTGGTGGGTTGGGGAAAAGCGGAGTTTGGGGATATGTCAGAAATCCTTCATTAATTCATAATATATTTCATTCTAAAGAGTTCATAACCATGTAACTTTGGATCTTGTCTTTGCAGGTTTATTAGTAGAAACAGAGAAGACAATTAAAGCTACATTCTGCCAACTTGCTTTAATAATTCCCATCTTCAGGCAACTTTTAATTTGACACTTTTTATTCTTGTATTTAATTTTTCTACAAACCACGTTGTTGATCCATACGGGATTCCACGTGCCCCCATGCTACTCGGGTCAGCTAGGGATGCTTTCAGCTACTGGACTAGTAGCAGAACACTTGTATTGCTCTCCCACAACCACGATACTTGCACTTTTTGCAAGCAAAAATCCCTCAAATGAAAAAAAGAATCCCATATATTGCTTGCTTATCACAATTTTTTTGAAGCAAGTAATTGCATCTACATGTGTAATCGGTATAATTCGCATCAAGTGGTATCAGAGCCTTTGATCGACATTTCTGTTAAGGGGCCAAACGCTAAATGGTGATTAGAGACTGGGTGTACATTAGTTAAGATTATTTAGGGCCTTCTTTGTAATTTTGCTTTACTAGCTCTCTTTTTGTAATTTAGTTTAACTATTTTTATTTTATCTCTTTTCTTAGTTAGAATGTTATTTAACTATTATGATTAATAG

mRNA sequence

AAAAAAAAATCATTGGCTGCGGGGAGCTTCGGGGGGATCGGAATTCGATCCTCCGATGGATAATTCCTTGCAGATTAAGAGAATCTGACAATGAACAAAGACATCTCAGAAAGCCAGTTCCTCATTTATCCCGGAAAATATGGCTGAATTCCCGTGGACATATGGTTCGCAAGAAGTCTTGAAGAAGGTACTCAAAGTTGCATCTGAGGAAATTGGTGTGGCTTTGGGCTTTAAGAAGGAGCGCTCCAAATTGACAAAATGGTTACACAAATCTGAAGTCGTTTTAAGAGATATCAACACTAAGAAATTGCGCCATGATTCTGTGAGAATGTGGGTGGAGGATCTTTAACATCTTGTTTACGAGGCCGATGATCTGTTGAATGAGCTTGTTTATGAAGATCTTTGACGCAAAGTGGAAACAGAGAAAACAAAGAAAAAGGTTTATTAGTAGAAACAGAGAAGACAATTAAAGCTACATTCTGCCAACTTGCTTTAATAATTCCCATCTTCAGGCAACTTTTAATTTGACACTTTTTATTCTTGTATTTAATTTTTCTACAAACCACGTTGTTGATCCATACGGGATTCCACGTGCCCCCATGCTACTCGGGTCAGCTAGGGATGCTTTCAGCTACTGGACTAGTAGCAGAACACTTGTATTGCTCTCCCACAACCACGATACTTGCACTTTTTGCAAGCAAAAATCCCTCAAATGAAAAAAAGAATCCCATATATTGCTTGCTTATCACAATTTTTTTGAAGCAAGTAATTGCATCTACATGTGTAATCGGTATAATTCGCATCAAGTGGTATCAGAGCCTTTGATCGACATTTCTGTTAAGGGGCCAAACGCTAAATGGTGATTAGAGACTGGGTGTACATTAGTTAAGATTATTTAGGGCCTTCTTTGTAATTTTGCTTTACTAGCTCTCTTTTTGTAATTTAGTTTAACTATTTTTATTTTATCTCTTTTCTTAGTTAGAATGTTATTTAACTATTATGATTAATAG

Coding sequence (CDS)

ATGGCTGAATTCCCGTGGACATATGGTTCGCAAGAAGTCTTGAAGAAGGTACTCAAAGTTGCATCTGAGGAAATTGGTGTGGCTTTGGGCTTTAAGAAGGAGCGCTCCAAATTGACAAAATGGTTACACAAATCTGAAGTCGTTTTAAGAGATATCAACACTAAGAAATTGCGCCATGATTCTGTGAGAATGTGGGTGGAGGATCTTTAA

Protein sequence

MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHDSVRMWVEDL
Homology
[Close]
BLAST of MELO3C017708 vs. NCBI nr
Match: TYK16982.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD
Sbjct: 21 MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 80

Query: 61 SVRMWVEDL 70
          SVRMWVEDL
Sbjct: 81 SVRMWVEDL 89

[Close]
BLAST of MELO3C017708 vs. NCBI nr
Match: KAA0044604.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEF WTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD
Sbjct: 21 MAEFLWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 80

Query: 61 SVRMWVEDL 70
          SVRMWVEDL
Sbjct: 81 SVRMWVEDL 89

[Close]
BLAST of MELO3C017708 vs. NCBI nr
Match: XP_022145177.1 (putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-17
Identity = 44/69 (63.77%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEF WT+  QEVL+K++KVA+++IG+A G +KE SKLTKWL K+E +L DIN +KL HD
Sbjct: 1  MAEFLWTFAVQEVLRKIVKVAAQQIGLAWGLEKELSKLTKWLLKAETILGDINRRKLHHD 60

Query: 61 SVRMWVEDL 70
          SVR+W+EDL
Sbjct: 61 SVRLWMEDL 69

[Close]
BLAST of MELO3C017708 vs. NCBI nr
Match: XP_038877313.1 (putative disease resistance protein RGA3 [Benincasa hispida])

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-17
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
           MAEF W +  QEVLKK +KVA+EEI +A GFKKE SKL K L KSE +LRDIN KKL H+
Sbjct: 124 MAEFLWIFAVQEVLKKTVKVAAEEISMAWGFKKELSKLRKCLLKSEAILRDINKKKLHHE 183

Query: 61  SVRMWVEDL 70
           SVRMWVEDL
Sbjct: 184 SVRMWVEDL 192

[Close]
BLAST of MELO3C017708 vs. NCBI nr
Match: KAA0042414.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa] >TYK00998.1 disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.5e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          M +F WT+  +E+LKKVLKVA E+ G+A GF+K  SKL KWL K+E  LRDINT+KL HD
Sbjct: 1  MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 61 SVRMWVEDL 70
          SVRMWV+DL
Sbjct: 61 SVRMWVDDL 69

[Close]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match: A0A5D3CZK0 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001230 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD
Sbjct: 21 MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 80

Query: 61 SVRMWVEDL 70
          SVRMWVEDL
Sbjct: 81 SVRMWVEDL 89

[Close]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match: A0A5A7TNB4 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003550 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEF WTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD
Sbjct: 21 MAEFLWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 80

Query: 61 SVRMWVEDL 70
          SVRMWVEDL
Sbjct: 81 SVRMWVEDL 89

[Close]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match: A0A6J1CVR6 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111014685 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 44/69 (63.77%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          MAEF WT+  QEVL+K++KVA+++IG+A G +KE SKLTKWL K+E +L DIN +KL HD
Sbjct: 1  MAEFLWTFAVQEVLRKIVKVAAQQIGLAWGLEKELSKLTKWLLKAETILGDINRRKLHHD 60

Query: 61 SVRMWVEDL 70
          SVR+W+EDL
Sbjct: 61 SVRLWMEDL 69

[Close]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match: A0A5A7TG70 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001980 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          M +F WT+  +E+LKKVLKVA E+ G+A GF+K  SKL KWL K+E  LRDINT+KL HD
Sbjct: 1  MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 61 SVRMWVEDL 70
          SVRMWV+DL
Sbjct: 61 SVRMWVDDL 69

[Close]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match: A0A1S3CHQ5 (disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103501070 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  MAEFPWTYGSQEVLKKVLKVASEEIGVALGFKKERSKLTKWLHKSEVVLRDINTKKLRHD 60
          M +F WT+  +E+LKKVLKVA E+ G+A GF+K  SKL KWL K+E  LRDINT+KL HD
Sbjct: 1  MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 61 SVRMWVEDL 70
          SVRMWV+DL
Sbjct: 61 SVRMWVDDL 69

The following BLAST results are available for this feature:
BLAST of MELO3C017708 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK16982.12.3e-30100.00disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
KAA0044604.13.3e-2998.55disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
XP_022145177.13.8e-1763.77putative disease resistance protein RGA3 [Momordica charantia][more]
XP_038877313.13.8e-1771.01putative disease resistance protein RGA3 [Benincasa hispida][more]
KAA0042414.16.5e-1765.22disease resistance protein RGA2-like [Cucumis melo var. makuwa] >TYK00998.1 dise... [more]
BLAST of MELO3C017708 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CZK01.1e-30100.00Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7TNB41.6e-2998.55Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1CVR61.8e-1763.77putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A5A7TG703.2e-1765.22Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CHQ53.2e-1765.22disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103501070 PE=... [more]
BLAST of MELO3C017708 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017708.1MELO3C017708.1mRNA