MELO3C017641.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017641.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	zinc finger CCCH domain-containing protein 54
Location	chr07: 24498294 .. 24498944 (+)
RNA-Seq Expression	MELO3C017641.jh1
Synteny	MELO3C017641.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTCTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

mRNA sequence

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTCTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Coding sequence (CDS)

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTCTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Protein sequence

MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK

Homology

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BLAST of MELO3C017641.jh1 vs. NCBI nr
Match: XP_008454474.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044676.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa] >TYK16906.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1177), Expect = 8.38e-163
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHK NLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of MELO3C017641.jh1 vs. NCBI nr
Match: KGN53171.2 (hypothetical protein Csa_015342 [Cucumis sativus])

HSP 1 Score: 422 bits (1084), Expect = 5.99e-148
Identity = 195/214 (91.12%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 3   QGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHD 62
            GFVFGINDVYGHEFS VSLPE+TVGNLTEK DDTAVFS+DEFRMYSYKIQRCPRNRSHD
Sbjct: 46  HGFVFGINDVYGHEFSVVSLPELTVGNLTEKTDDTAVFSSDEFRMYSYKIQRCPRNRSHD 105

Query: 63  WTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT 122
           WTECPYAHRGEKAQRRDPR+FNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT
Sbjct: 106 WTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT 165

Query: 123 RACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILEIP 182
           RACNAGRFCQRKVCFFAHSPEELRPETK KS+ +A +QRVAV A+ESPPEEKNDGILEIP
Sbjct: 166 RACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPPEEKNDGILEIP 225

Query: 183 ARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           AR +G GRKNERSFG DV+ELELPHIEWISELLK
Sbjct: 226 ARVSGSGRKNERSFGLDVTELELPHIEWISELLK 259

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BLAST of MELO3C017641.jh1 vs. NCBI nr
Match: XP_038878131.1 (zinc finger CCCH domain-containing protein 54 [Benincasa hispida])

HSP 1 Score: 385 bits (990), Expect = 1.98e-134
Identity = 180/216 (83.33%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVS+PE+         DDTA+FS+DEFRMY+YKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSVPEI---------DDTAMFSSDEFRMYAYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSP+ELRPETK K N NA RQRVAVA VESP EEK DG  E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVADVESPSEEKFDGASE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IP R   GGR+ +RSFG +VSEL+LPH+EWISELL+
Sbjct: 181 IPVRGTSGGREKQRSFGLEVSELDLPHVEWISELLQ 207

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BLAST of MELO3C017641.jh1 vs. NCBI nr
Match: XP_023553083.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357 bits (916), Expect = 5.53e-123
Identity = 166/218 (76.15%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   RVA+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARVALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of MELO3C017641.jh1 vs. NCBI nr
Match: XP_022922815.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita moschata])

HSP 1 Score: 355 bits (912), Expect = 2.25e-122
Identity = 165/218 (75.69%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot
Match: O65036 (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN=TZF6 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-55
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 36  DTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ +DEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+
Sbjct: 44  DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 153
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 104 GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

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BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKSNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
              S L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

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BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

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BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 81/141 (57.45%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 40  FSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           ++ DEFRMY +K++RC R RSHDWTECP+AH GEKA+RRDPRR+ Y+  ACP FR G C 
Sbjct: 73  YACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCK 132

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR---PETKHKSNLN 159
           +GD CEFAHGVFE WLHPARYRT+ C  G  C+R+VCFFAH+P++LR   P  +  SN  
Sbjct: 133 RGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNSP 192

Query: 160 AQRQRVAVAAVESPPEEKNDG 178
                    A  SP  E  DG
Sbjct: 193 RGCGGGGAGAAASPLAESYDG 213

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BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot
Match: Q9LXV4 (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN=At5g12850 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.0e-44
Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 21  SLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP++  G          ++STDEFRM+S+KI+ C R  SHDWTECP+AH GE A+RRDP
Sbjct: 244 SLPDIKSG----------IYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDP 303

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+YT V CP F+ GSC +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 304 RKFHYTCVPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAH 363

Query: 141 SPEELRP-ETKHKSNLNAQRQRVAVAA 167
           + EELRP      S L + R   AV+A
Sbjct: 364 ANEELRPLYPSTGSGLPSPRASSAVSA 380

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BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TRB5 (Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00410 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 4.06e-163
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHK NLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BYP8 (zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC103494870 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 4.06e-163
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHK NLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E9W0 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=LOC111430684 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 1.09e-122
Identity = 165/218 (75.69%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

[Close]

BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JDT4 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC111483496 PE=4 SV=1)

HSP 1 Score: 355 bits (911), Expect = 1.55e-122
Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           MFQGFVFGINDVYGHEF+AV+LPE    N  LT + +DTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MFQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTNDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK+K +  A  +R A+AA++ P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKNKLHFAAPVERAALAALKYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASESELPHIEWISELLQ 218

[Close]

BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CJI1 (zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011570 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.37e-102
Identity = 149/224 (66.52%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 1   MFQGFVFGIND-VYGHEFSAVSLPEVTVGNLTEKVDDTA-VFSTDEFRMYSYKIQRCPRN 60
           MFQGF  GIN+ V+ H+FS           L E+V+D A VF +DEFRM++YKIQRCPR 
Sbjct: 2   MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRT 61

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPA
Sbjct: 62  RSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPA 121

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKSNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK K + NA R RV V AVE+P E KND +
Sbjct: 122 RYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDV 181

Query: 181 LEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 216
             I     G        RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 182 SNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWIRELLQ 218

[Close]

BLAST of MELO3C017641.jh1 vs. TAIR 10
Match: AT5G07500.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-56
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 36  DTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ +DEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+
Sbjct: 44  DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 153
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 104 GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

[Close]

BLAST of MELO3C017641.jh1 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKSNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
              S L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

[Close]

BLAST of MELO3C017641.jh1 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKSNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
              S L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

[Close]

BLAST of MELO3C017641.jh1 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of MELO3C017641.jh1 vs. TAIR 10
Match: AT5G12850.1 (CCCH-type zinc finger protein with ARM repeat domain )

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-45
Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 21  SLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP++  G          ++STDEFRM+S+KI+ C R  SHDWTECP+AH GE A+RRDP
Sbjct: 244 SLPDIKSG----------IYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDP 303

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+YT V CP F+ GSC +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 304 RKFHYTCVPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAH 363

Query: 141 SPEELRP-ETKHKSNLNAQRQRVAVAA 167
           + EELRP      S L + R   AV+A
Sbjct: 364 ANEELRPLYPSTGSGLPSPRASSAVSA 380

The following BLAST results are available for this feature:

BLAST of MELO3C017641.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454474.1	8.38e-163	99.54	PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044...	[more]
KGN53171.2	5.99e-148	91.12	hypothetical protein Csa_015342 [Cucumis sativus]	[more]
XP_038878131.1	1.98e-134	83.33	zinc finger CCCH domain-containing protein 54 [Benincasa hispida]	[more]
XP_023553083.1	5.53e-123	76.15	zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]	[more]
XP_022922815.1	2.25e-122	75.69	zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]	[more]

BLAST of MELO3C017641.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65036	3.9e-55	78.81	Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82307	1.8e-44	52.38	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	3.1e-44	69.16	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L4N4	4.1e-44	57.45	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
Q9LXV4	7.0e-44	57.14	Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MELO3C017641.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRB5	4.06e-163	99.54	Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BYP8	4.06e-163	99.54	zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1E9W0	1.09e-122	75.69	zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JDT4	1.55e-122	75.23	zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CJI1	1.37e-102	66.52	zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia ...	[more]

BLAST of MELO3C017641.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07500.1	2.8e-56	78.81	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	1.3e-45	52.38	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	1.3e-45	52.38	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	2.2e-45	69.16	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G12850.1	5.0e-45	57.14	CCCH-type zinc finger protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 84..110 e-value: 1.2E-5 score: 34.7 coord: 119..142 e-value: 13.0 score: 7.5
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 88..109 e-value: 1.2E-5 score: 25.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 84..111 score: 13.196945
None	No IPR available	GENE3D	3.30.1370.210		coord: 85..148 e-value: 4.9E-8 score: 34.9
None	No IPR available	PANTHER	PTHR14493:SF109	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54	coord: 34..167
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 34..167
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 83..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017641.jh1.t1	MELO3C017641.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding