MELO3C017602 (gene) Melon (DHL92) v4

Overview


Name	MELO3C017602
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	polyadenylate-binding protein 2-like
Location	chr07: 23262442 .. 23265934 (-)
RNA-Seq Expression	MELO3C017602
Synteny	MELO3C017602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTATGCAGTTCTACGCATCGAACGAGGAGATTTCTAGAAACCGAAGCGAAATTGCGAGCGAACGAGATATGGAGGAAGAAGAGCACGAGGTATACGGTGGAGAGATCCCAGTTGAAGGGGAGATGGAAGGGGACGTCGACATGTCCGCCGGCGACGACGACGCTGTCAAGGTTGCCATTTGTTCTTTTTCTTTATGTTTCTCGTGCTTTAGAGAGAATCAGAAGAATTACAATTGTGATCGTTTATGTGTTACAGGAGCTTGACGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAAGAAGCAGCTGCTCTTCGAGAAATGCAGGCCAAGGTTGAAAAAGAAATGGGAGCTGTGCAAGGTTGTTTTCTTATGATTACGCATTGTTGTTTTCGTTTAGAAACATTTAGTTATGGAATTTCTTGAATTTGAATTCTGATATTGTAACCAATGATTTGGGGCTTGATTTTTTTTGATGTGTTGTGATATATTTGCTAGTATTTCTACATATCTGTTTTGTTTCTTGCATACAACAGATGCAGATATAGTTAGTGACTTGACATTATGGTTCATAATTGTTAAATTAAATTTTAGAATATGTTTATGCTTGGAAGTTTAGTTTTATGTAACCTAGGGGAGCAATAATCCTATGTGATTATGGTTTTAGACAAACCAATATTGAATTATTCGATCATGCTGGTTGAAAGTTTCTTAAACTGGGTGAATTTCATAGTATGCTATTATACTTAGTTTCTTCCTATAATTATTCTCCTATTTGACCTATTTTATTTATACCTATTACTGTTATGTTGATGTAGATCCTGCTGGTACATCAGCTGGTCAAGCAGGCAAGGAGGAGACTGATTCACGATCAGTATTTGTTGGCAATGTGAGAAGAAAAATGTCCCTACTGATGTCCTTTAGATTTGAGAAAAACTTTTTAGTTATTTGATCTGTGGAAAAATGTTATTGAAATGGGGAATTTCTACAAAAATTCAAAAAGAAAAAAAAAAAAAAAAAGGAAGGAAGAAGAAAAGAAAAAAGAAAGAAGAAAACTGTGAACGATGGTTGAAATACTGGTATAATGGGAAAAAATCATTGAGAAAAAGAAAGAAAGAAAGAAAGAAAAAAATCTGAAACGTCAAAAACCATTAGTGAATTGTTGCATTTAGAACAAAGGGACTGTTGCGAGTAGAACTTATGTTGCTGTAAGACATGCGCTTTGGAGGCTGAGACCGTTAAATGTGGAATAAAGATGTCGATGACTCAACTCTAGGTGACAACTCAAATGTCTCCGAGGAAGCAGAGGCGAGCCAAGTGCATGCAATTTTAGTTGCAGAGCCTTGTCAATGCTCGCAGTATTGTCGTTTGTCTCACAAATGAGCCGTAAAGAAGGAGGCGAGGGTGTAAGATAATCGCTTTTTTGTGGAATTATTTTTCTAGTTTGTGCTTCATTTGACCCAGTTAGACCAACTATTAGATTTTAATGCATTCATTTCACCTTAACCAAGTGATCTTTGAAAGAACTATGAGTCCTTTTCTTCATACTAGAAGAATTTACTAGATTTATTTATTAATCTAGACTTTTCCTTTTAGTTAGAAACTCAACCTGTCATCTTCCTGCAGAGAGTCTTCTAGTTTCAGTGTGGTAATTTTATTTCAAAACTATGTGAACTAAGATAAATGTGAGAAATCCTCTATGTTGAAGAATAAACACTTCATTCCCAATCATATCTAATGCGGAACTGTTTCTACTAATTATAATTGATCTCTTAGCAGAGGGAGGCATGCTTGGACATGCATCTGCCATGTGAATCTCATGCCTCTGATTGACTGCTACTTCTAAATATGTTCATTGAACATGAGTTGGATTTTCGTGGTGATTCGGTGATTTTGGTTATAGTTAATAATTTCTGATTCTCTTCCCATCCCATTGGAAGTTTATTACTTCTCAATGTTGCTCTGGTGTATTTATCCCCAAACCTTGTTGATTACATGTGATGAAGTTTGCTTTTTTTTATTTTATTTTATTTATTTTATTTATTTATTTTTTGTACAAAGCTTCTTGGCGTAAAACTTTATTAAGAAACCAACAATTAAGTCATATCGAAAATGTAAGTAGTGTTTATATTTATATTAAAAGCTAAACAACAATCATAAGACCTTTTTTTTAAAGATAACGACATACTAAATCTTTGCTGTTTGATGTGTTCGAGAACACATAGAGCTTTGTATTCACTTTTTATGGAACTTAACTATTTTATGCTCAAAGCTCTACTTCAACAATCAACATCCTTGTTTTGAAGGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGTCAGCCGAAGGGCTTTGCCTATGTAGAGTTTCTTGAAGCTGAAGCTGTTCAAGAGGCTCTCGTTCTGAATGAATCTGAGCTACATGGGCGGCAACTGAAGGTGAGTCCTTCATTTTCTCGGTTTTCCATAAAAAAGAAATGGTTTTTCGTCCACAAAAGAAGAAAAAAAAGGAAAAAAAGAAATTTCTGGAAGGAGAAACCTTTCTTGTTCACTGGTTTGGTGTGAATATAGATATAGGTTAAATTTTAAATTTGGTTGTAGAGTTTGAGTTAGAATTTAGTCTTGATGGTTCATAATTAATATTTAGTCCCTAGGGTTTCATAAATAATTCACAGATGGGTTCAACGCTAAGGACATTTATGAGAATTTTATCAAATAATAGGGACTATTTATGAGGTTTTGTCAAAACTGTAGAGACTAAATTCTATCTTTAAAAATATATGGATTAAACTCTAACTCTTCAGTTTGACAAACCCTAGGAACAAATTTGTAATTCAACCAGATAGATATTATGCAATGCTTGGGAACTTCAATATCACTCTGACCAATATTGACCTTATTATTTTTGCTTCGTTACACCATTCCAGGTTTTGCCCAAGAGAACAAATGTTCCTGGTATGAAGCAATATCGTGCACGTCGCTATAACCCGTATGTGGGATTTAGGAGACCTTATGCACCACCATATTTCTATTCACCTTACGGATATGGGTACAGTTTCTAGTTTCCTAATATTGCATTGTCATGAAATTGTTGATTCTGCCAATTTCTTGATCCTTCAATATCCCACCAATGCAGGAAGATGCCCCGGTTTCGAAGGTCCATGAGGTACATGCCTTACTATTAGATGATGCCATATCATTGTTCAGGTTTAATAAGTTTGTCCTGAAAGAGTTGGCAGTTGCTTTTGATCCTCGAGAGAATAGAGAAAGGATACATGTCTATATTCATGTTATATTGTTATCTGCCTATTGCTTTTGTTATCTTGGATATAAATTACTTTGCCGTTTCAATAAGTACATATATATATTTTTTGCCTAATTACCGGTTAATACACCGTGACACCGTGTCCAGTTTTAAGGATGCGTCTTAATTGA

mRNA sequence

TTCTATGCAGTTCTACGCATCGAACGAGGAGATTTCTAGAAACCGAAGCGAAATTGCGAGCGAACGAGATATGGAGGAAGAAGAGCACGAGGTATACGGTGGAGAGATCCCAGTTGAAGGGGAGATGGAAGGGGACGTCGACATGTCCGCCGGCGACGACGACGCTGTCAAGGAGCTTGACGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAAGAAGCAGCTGCTCTTCGAGAAATGCAGGCCAAGGTTGAAAAAGAAATGGGAGCTGTGCAAGATCCTGCTGGTACATCAGCTGGTCAAGCAGGCAAGGAGGAGACTGATTCACGATCAGTATTTGTTGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGTCAGCCGAAGGGCTTTGCCTATGTAGAGTTTCTTGAAGCTGAAGCTGTTCAAGAGGCTCTCGTTCTGAATGAATCTGAGCTACATGGGCGGCAACTGAAGGTTTTGCCCAAGAGAACAAATGTTCCTGGTATGAAGCAATATCGTGCACGTCGCTATAACCCGTATGTGGGATTTAGGAGACCTTATGCACCACCATATTTCTATTCACCTTACGGATATGGGAAGATGCCCCGGTTTCGAAGGTCCATGAGGTACATGCCTTACTATTAGATGATGCCATATCATTGTTCAGGTTTAATAAGTTTGTCCTGAAAGAGTTGGCAGTTGCTTTTGATCCTCGAGAGAATAGAGAAAGGATACATGTCTATATTCATGTTATATTGTTATCTGCCTATTGCTTTTGTTATCTTGGATATAAATTACTTTGCCGTTTCAATAAGTACATATATATATTTTTTGCCTAATTACCGGTTAATACACCGTGACACCGTGTCCAGTTTTAAGGATGCGTCTTAATTGA

Coding sequence (CDS)

ATGCAGTTCTACGCATCGAACGAGGAGATTTCTAGAAACCGAAGCGAAATTGCGAGCGAACGAGATATGGAGGAAGAAGAGCACGAGGTATACGGTGGAGAGATCCCAGTTGAAGGGGAGATGGAAGGGGACGTCGACATGTCCGCCGGCGACGACGACGCTGTCAAGGAGCTTGACGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAAGAAGCAGCTGCTCTTCGAGAAATGCAGGCCAAGGTTGAAAAAGAAATGGGAGCTGTGCAAGATCCTGCTGGTACATCAGCTGGTCAAGCAGGCAAGGAGGAGACTGATTCACGATCAGTATTTGTTGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGTCAGCCGAAGGGCTTTGCCTATGTAGAGTTTCTTGAAGCTGAAGCTGTTCAAGAGGCTCTCGTTCTGAATGAATCTGAGCTACATGGGCGGCAACTGAAGGTTTTGCCCAAGAGAACAAATGTTCCTGGTATGAAGCAATATCGTGCACGTCGCTATAACCCGTATGTGGGATTTAGGAGACCTTATGCACCACCATATTTCTATTCACCTTACGGATATGGGAAGATGCCCCGGTTTCGAAGGTCCATGAGGTACATGCCTTACTATTAG

Protein sequence

MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

Homology

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BLAST of MELO3C017602 vs. NCBI nr
Match: XP_008453809.2 (PREDICTED: polyadenylate-binding protein 2 isoform X1 [Cucumis melo] >KAA0044711.1 polyadenylate-binding protein 2 isoform X1 [Cucumis melo var. makuwa] >TYK16876.1 polyadenylate-binding protein 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 9.3e-124
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120

Query: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180
           PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180

Query: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 234

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BLAST of MELO3C017602 vs. NCBI nr
Match: KGN53209.1 (hypothetical protein Csa_014786 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 2.5e-121
Identity = 230/234 (98.29%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRN+S I SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNQSGIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACT
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACT 120

Query: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180
           PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180

Query: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 234

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BLAST of MELO3C017602 vs. NCBI nr
Match: KAE8637153.1 (hypothetical protein CSA_004635 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 230/272 (84.56%), Postives = 231/272 (84.93%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRN+S I SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNQSGIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGN------ 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGN      
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNSLVNAR 120

Query: 121 --------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTD 180
                                           VDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 121 SIIVCLTNELKGGGEGKLNLSSSGRESSSFIVVDYACTPEEVQQHFQSCGTVNRVTILTD 180

Query: 181 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 235
           KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG
Sbjct: 181 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 240

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BLAST of MELO3C017602 vs. NCBI nr
Match: KAE8637180.1 (hypothetical protein CSA_018811 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 225/267 (84.27%), Postives = 226/267 (84.64%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRN+S I SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNQSGIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGN------ 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGN      
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNSLVNAR 120

Query: 121 --------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTD 180
                                           VDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 121 SIIVCLTNELKGGGEGKLNLSSSGRESSSFIVVDYACTPEEVQQHFQSCGTVNRVTILTD 180

Query: 181 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 230
           KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG
Sbjct: 181 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 240

[Close]

BLAST of MELO3C017602 vs. NCBI nr
Match: XP_004146877.1 (polyadenylate-binding protein 2 [Cucumis sativus] >XP_031745674.1 polyadenylate-binding protein 2-like [Cucumis sativus] >XP_031745676.1 polyadenylate-binding protein 2-like [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.4e-111
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 82
           MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV
Sbjct: 1   MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 60

Query: 83  EKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 142
           EKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 61  EKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120

Query: 143 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 202
           KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG
Sbjct: 121 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 180

Query: 203 FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 212

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BLAST of MELO3C017602 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.6e-92
Identity = 180/220 (81.82%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAAL 82
           MEEEEHEVYGGEIP  GEM+G       D+DM+A DDDAVKELDEMKKRLKEME+EAAAL
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 83  REMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVN 142
           REMQAKVEKEMGA QDPA  +A QAGKEE D+RSVFVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 120

Query: 143 RVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRAR 202
           RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R R
Sbjct: 121 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 180

Query: 203 RYNPYVG--FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
           R+NPY+G  FRRP+  PY YSPYGYGK PRFRR MRYMPY
Sbjct: 181 RFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]

BLAST of MELO3C017602 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.5e-89
Identity = 173/216 (80.09%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQ 82
           MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 83  AKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 142
           AKVEKEMGA QDPA  +A Q GKEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 143 LTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNP 202
           L DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 203 YVG--FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
            +G  FRRP+ PPYFYSPYGYGK PRFRR MRYMPY
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]

BLAST of MELO3C017602 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-70
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 0


Query: 24  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEM 83
           +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 84  EEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHF 143
           EEEA ALREMQAK EK+MGA QDP+G     A KEE DSRS++VGNVDYACTPEEVQQHF
Sbjct: 65  EEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHF 124

Query: 144 QSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPG 203
           QSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPG
Sbjct: 125 QSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPG 184

Query: 204 MKQY--RARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
           M+Q+  R R + P  GF  P  P  FY PY YG++PRFRR MRY PY
Sbjct: 185 MRQFRGRGRPFRPMRGF-MPGVP--FYPPYAYGRVPRFRRPMRYRPY 227

[Close]

BLAST of MELO3C017602 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.4e-34
Identity = 85/145 (58.62%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 52  DDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVF 111
           D   KEL EMK+R+ EME EAA LR MQ +++ E         T A +  KE  D++SV+
Sbjct: 8   DTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNE---------TEALRNDKESIDAQSVY 67

Query: 112 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALVLNES 171
           VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E   V  AL+LN S
Sbjct: 68  VGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGS 127

Query: 172 ELHGRQLKVLPKRTNVPGMKQYRAR 196
            LH R LKV PKRTNVPGM + R R
Sbjct: 128 MLHERPLKVTPKRTNVPGMSRGRGR 143

[Close]

BLAST of MELO3C017602 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 101/231 (43.72%), Postives = 130/231 (56.28%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 82
           +EE E E    E P  GE+ GD  +         EL+ +K R++EMEEEA  L+E+Q +V
Sbjct: 83  LEELEDEELEEEEP--GELTGDQTIED------PELEAIKARVREMEEEAEKLKELQNEV 142

Query: 83  EKEMGAVQDPAGTSAGQAG--------KEETDSRSVFVGNVDYACTPEEVQQHFQSCGTV 142
           EK+M     P     G AG        K E D+RS++VGNVDY  T EE++ HF  CG+V
Sbjct: 143 EKQMNMSPPP-----GNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSV 202

Query: 143 NRVTILTDKF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMK--- 202
           NRVTIL DKF G PKGFAY+EF + E+V+ +L L+ES   GRQ+KV+PKRTN PG+    
Sbjct: 203 NRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTD 262

Query: 203 ------QYRAR--RYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
                 +YRAR   Y+    F   Y P     P G     R R +  Y PY
Sbjct: 263 RGFPRARYRARASSYSSRSRFYSGYTP----RPRGRVYRGRARATSWYTPY 296

[Close]

BLAST of MELO3C017602 vs. ExPASy TrEMBL
Match: A0A5D3D298 (Polyadenylate-binding protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00070 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.5e-124
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120

Query: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180
           PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180

Query: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 234

[Close]

BLAST of MELO3C017602 vs. ExPASy TrEMBL
Match: A0A1S3BX92 (polyadenylate-binding protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494425 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.5e-124
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120

Query: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180
           PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180

Query: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 234

[Close]

BLAST of MELO3C017602 vs. ExPASy TrEMBL
Match: A0A0A0KWF2 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G026860 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 230/234 (98.29%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MQFYASNEEISRNRSEIASERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60
           MQFYASNEEISRN+S I SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE
Sbjct: 1   MQFYASNEEISRNQSGIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDE 60

Query: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACT 120
           MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACT
Sbjct: 61  MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACT 120

Query: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180
           PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 180

Query: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 PKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 234

[Close]

BLAST of MELO3C017602 vs. ExPASy TrEMBL
Match: A0A6J1C6V0 (polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008517 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.3e-109
Identity = 205/212 (96.70%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 82
           MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV
Sbjct: 1   MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 60

Query: 83  EKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 142
           EKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 61  EKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120

Query: 143 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 202
           KFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+G
Sbjct: 121 KFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG 180

Query: 203 FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           FRRPY PPYFYSPYGYGKMPRFRR MRYMPYY
Sbjct: 181 FRRPYVPPYFYSPYGYGKMPRFRRPMRYMPYY 212

[Close]

BLAST of MELO3C017602 vs. ExPASy TrEMBL
Match: A0A6J1EN98 (polyadenylate-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435898 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 82
           MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKV
Sbjct: 1   MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKV 60

Query: 83  EKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 142
           EKEMGAVQDPAGTS  QAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 61  EKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120

Query: 143 KFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG 202
           KFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVG
Sbjct: 121 KFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG 180

Query: 203 FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 235
           FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Sbjct: 181 FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 212

[Close]

BLAST of MELO3C017602 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-93
Identity = 180/220 (81.82%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAAL 82
           MEEEEHEVYGGEIP  GEM+G       D+DM+A DDDAVKELDEMKKRLKEME+EAAAL
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 83  REMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVN 142
           REMQAKVEKEMGA QDPA  +A QAGKEE D+RSVFVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 120

Query: 143 RVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRAR 202
           RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R R
Sbjct: 121 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 180

Query: 203 RYNPYVG--FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
           R+NPY+G  FRRP+  PY YSPYGYGK PRFRR MRYMPY
Sbjct: 181 RFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]

BLAST of MELO3C017602 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 329.3 bits (843), Expect = 2.5e-90
Identity = 173/216 (80.09%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQ 82
           MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 83  AKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 142
           AKVEKEMGA QDPA  +A Q GKEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 143 LTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNP 202
           L DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 203 YVG--FRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
            +G  FRRP+ PPYFYSPYGYGK PRFRR MRYMPY
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]

BLAST of MELO3C017602 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-83
Identity = 161/202 (79.70%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 23  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQ 82
           MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 83  AKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 142
           AKVEKEMGA QDPA  +A Q GKEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 143 LTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNP 202
           L DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 203 YVG--FRRPYAPPYFYSPYGYG 220
            +G  FRRP+ PPYFYSPYGYG
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYG 202

[Close]

BLAST of MELO3C017602 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 265.0 bits (676), Expect = 5.7e-71
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 0


Query: 24  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEM 83
           +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 84  EEEAAALREMQAKVEKEMGAVQDPAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHF 143
           EEEA ALREMQAK EK+MGA QDP+G     A KEE DSRS++VGNVDYACTPEEVQQHF
Sbjct: 65  EEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHF 124

Query: 144 QSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPG 203
           QSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPG
Sbjct: 125 QSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPG 184

Query: 204 MKQY--RARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY 234
           M+Q+  R R + P  GF  P  P  FY PY YG++PRFRR MRY PY
Sbjct: 185 MRQFRGRGRPFRPMRGF-MPGVP--FYPPYAYGRVPRFRRPMRYRPY 227

[Close]

BLAST of MELO3C017602 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 243.0 bits (619), Expect = 2.3e-64
Identity = 146/264 (55.30%), Postives = 174/264 (65.91%), Query Frame = 0


Query: 24  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEM 83
           +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 84  EEEAAALREMQAKVEKEMGAVQ-------------------------------------D 143
           EEEA ALREMQAK EK+MGA Q                                     +
Sbjct: 65  EEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSRNLLEFEYEKE 124

Query: 144 PAGTSAGQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFA 203
              +    A KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFA
Sbjct: 125 IINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFA 184

Query: 204 YVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRPYAP 234
           YVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P  P
Sbjct: 185 YVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRPFRPMRGF-MPGVP 244

The following BLAST results are available for this feature:

BLAST of MELO3C017602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453809.2	9.3e-124	100.00	PREDICTED: polyadenylate-binding protein 2 isoform X1 [Cucumis melo] >KAA0044711...	[more]
KGN53209.1	2.5e-121	98.29	hypothetical protein Csa_014786 [Cucumis sativus]	[more]
KAE8637153.1	1.2e-115	84.56	hypothetical protein CSA_004635 [Cucumis sativus]	[more]
KAE8637180.1	2.1e-112	84.27	hypothetical protein CSA_018811 [Cucumis sativus]	[more]
XP_004146877.1	2.4e-111	99.53	polyadenylate-binding protein 2 [Cucumis sativus] >XP_031745674.1 polyadenylate-...	[more]

BLAST of MELO3C017602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJN9	2.6e-92	81.82	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV...	[more]
Q9LX90	3.5e-89	80.09	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV...	[more]
Q93VI4	8.0e-70	65.64	Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV...	[more]
O14327	5.4e-34	58.62	Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q9DDY9	1.9e-31	43.72	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]

BLAST of MELO3C017602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D298	4.5e-124	100.00	Polyadenylate-binding protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BX92	4.5e-124	100.00	polyadenylate-binding protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034944...	[more]
A0A0A0KWF2	1.2e-121	98.29	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G026860 PE=4 SV...	[more]
A0A6J1C6V0	5.3e-109	96.70	polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EN98	2.0e-108	96.23	polyadenylate-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]

BLAST of MELO3C017602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65260.1	1.8e-93	81.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G10350.1	2.5e-90	80.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G10350.2	5.0e-83	79.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.1	5.7e-71	65.64	polyadenylate-binding protein 1	[more]
AT5G51120.2	2.3e-64	55.30	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..85
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..35
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 23..232
None	No IPR available	PANTHER	PTHR23236:SF79	SUBFAMILY NOT NAMED	coord: 23..232
None	No IPR available	CDD	cd12306	RRM_II_PABPs	coord: 109..180 e-value: 1.94437E-48 score: 152.06
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 109..180 e-value: 3.7E-20 score: 83.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 110..178 e-value: 1.8E-16 score: 59.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 108..184 score: 16.773018
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 47..180 e-value: 6.9E-29 score: 102.6
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 99..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017602.1	MELO3C017602.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding