MELO3C017598.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017598.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Histone H3
Location	chr07: 24227683 .. 24230558 (+)
RNA-Seq Expression	MELO3C017598.jh1
Synteny	MELO3C017598.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCACATCGGGATTGTAAAATCGGTTTCTTTGTAGAACTCTCTCTTTATACTAAAGTGACAAATCTTGAGGAGCTTTACTTTGTAACTTTGAGTTTGTTCGATTTTGAATTATCAATTATTAAACCCTTTCTAAGTTCATGAAGTTGTTCTTCTCAAACTTTGTTTGATCTCGAACTCATTGCAACACTTCTTAGATATATATAATTTCTTCAATCAACAAAATGGACGGGTCTTAGAAGTTAGAAACAATGCTAATTGAGATTTATAACTAATTTACTTATGAAAGCTACAAAGTTATACTCCTAAAATTTATATATTTGAACAAAACATTGATAAAATAACTGAAGGTAGCACTCTATTAGTCTATTTATGAAAGTATTTACAATTAAGAGTTCAAATGGGTTTGATCTCCCACCAAACATATAAAAGAAACAAACATTTCACAATTTTTCAATCACTAATGTTAGGTCAACAGTAATATTCTTTGTAATATAGACAAAAATAAAGAAAATAATGACAATTCTTTTAGAAATTTTTGCAATTCTTTTCCAAGAAAAATATTGTAATCCCAACTCCTAAAAATGGATAAATCCTACATGGCATGATTTGATTGGTCAAATTTATAGTCCACCAATGGAAAAACAAAAAAAAAAAAAAAAAAAAAACGAAACCTTTTGTTGACAAATTCAAAATCTAAACTGCCCTGCAAAAGGGTAATCATCTCACGTTTCATTCTCTAATCCCCCAATAACCCAAAAAGAAAGAATTGCCACAGATTTCTTGCGATTCCAACCAATAGGAAACGAGTATTGTATTCTCACGATCCTCGTCTACCCTTTCACTATCACATCGTGGCCGTTCACTGTACTCGAGAAAACACAACTCAAGCCCTCATTTACCGTTAGATTCGTACACCTAAAAAACACACGGATGTGCTCTTTTAACCGTCCGATCTTCAGATTCTTTCTTCTTTTATGACGCTATATATATGCTCTAACTGCACTTATCGTTGAACTTTTGGCTTCTTTGACGAAGAGAAGGGATCTGGTCGAGAGAGAAGAACCGCCGAAGCGACATCAGGTTTGTCTTAATTCTTCCTTCTTTTCTTCTTTCATCATTATTCTGAAATTCCGTCAGGGTTTTAGATTGATTTTGAATTCTCTTTCGAGTAGTGTATTTGTTTCCAGATCTTTCTATTTTCTTCTATAGGTTATTCCGCTGTCGTCCTTCTCCGCTCTCAATTTTGTTTCTGAGCTTAGGTTTAGGAGAGATTTTAGGGCTTTCTGGATCTCCCTTGGTTACATGGTTCGCATGCTTTCTCAAATTTCTCCCGTTTGAACGTGTTTAGTGGTTTTGTTCTGTATGTTTTTCAGTTTATGAGTGCATGCGATAAGGAAATAGAATTGGATATCAATTAGATAGGAGGAATAATATGGTAGTGCTGTTCGACTTTCTGTTATCTCATATAGGCGTTTTTGTGAAGACTTCTGGAATGAAAATTTGTGCCGGATAACGTCGAATTGTGGTTGATTTGATGTTGGGGTTTGTTTTTCTTTAGATGGCTCGTACCAAGCAAACTGCCCGTAAATCCACTGGAGGGAAGGCTCCAAGGAAACAGTTGGCTACAAAGGTTTGTTCAAGTTTTTTGCTTGAAATTTCGTGGATGAATTGATTTGATTTTTCATGAGCTTTCTATTTATTTATGCATTTTTTGTATTTGGATTATGTAGGCTGCTCGTAAGTCCGCCCCAACCACAGGAGGAGTGAAGAAGCCACACAGATACCGTCCTGGAACTGTTGCTCTTCGGTAGGCTTACACGGTTTAATTCCTTGAATTTTCCGCTTTAGTTGGTGTGATTTGTTTAATTGCTTTCAACAAAGATCATAACTTCCTGGTTCCTTGTTGATCCGTGCAGTGAAATCCGTAAGTATCAGAAGAGTACTGAGCTTTTGATCAGGAAGTTGCCCTTCCAGAGGCTGGTTCGTGAAATTGCCCAGGACTTTAAGGTTCGTTGCAATCTCTTTCACTATCTGCTCTGCGATATATTCTTGAGTTTGATGATAAAATCAAAGCTGATGTATAAAATTGCTTTGTGTGCAGACTGATCTGCGTTTCCAGAGCCATGCTGTTCTTGCATTGCAAGAGGCAGCGGAGGCTTACCTTGTTGGATTGTTCGAGGACACCAATCTCTGTGCAATCCACGCCAAGCGGGTCACCATAATGCCCAAAGATATCCAGTTGGCTCGGAGAATCAGAGGTGAACGTGCTTAGAAGATGTATTGTTGTTTGGTGAATGGTATTGGCTGCAAGGAGGTGATCAAAAGACCTAATTGATGATGATGAAGGATGATGATGGGGGTGGTTCTTATTTTTGTTTTTAGCAAGGGTTAGTAGATAGTTTTATACTAGAAAAACTTGTAGTGAATATGATAAAAAGGCATAATGCTTTTGGTTGTGCATGTTAATGTTTAGTTGTGGATGATTTTGTTTTTTGTTCTTTTAAAAAAGGATGGAGGAGCTTAATTCTGTATTTCCATTGATGAATTGTGTTTCTGGGGTATGCAGCCAAACTAATATTTGTTGGATAACCTAAACCTATCATATCTAATTTAGTTCAGATTTGTCTTAGTTCATCAAAATTTTCACCTCGTTATGTGTGTGGGTTTCGTGTTTATGTTCTTTTATTAAAGGTGGTTCTTGCTCCAATTTGATATAGTGAGGTTACTACCTGTGCATCTATAATTCAATAGTTCTATCACATCCTTTGGTTACTATCCTCGACTTCTAAATCATCTGCTGTACATTTGTGCTGTGTTCATGATGATACAGTGATGTAGAGTGAAGGGCGTCGATCTTTTTAACAGCAGAT

mRNA sequence

ATGGTGGCACATCGGGATTGTAAAATCGGTTTCTTTGTAGAACTCTCTCTTTATACTAAAGTGACAAATCTTGAGGAGCTTTACTTTAGAAGGGATCTGGTCGAGAGAGAAGAACCGCCGAAGCGACATCAGGTTATTCCGCTGTCGTCCTTCTCCGCTCTCAATTTTGTTTCTGAGCTTAGGTTTAGGAGAGATTTTAGGGCTTTCTGGATCTCCCTTGGTTACATGGTTCGCATGCTTTCTCAAATTTCTCCCATGGCTCGTACCAAGCAAACTGCCCGTAAATCCACTGGAGGGAAGGCTCCAAGGAAACAGTTGGCTACAAAGGCTGCTCGTAAGTCCGCCCCAACCACAGGAGGAGTGAAGAAGCCACACAGATACCGTCCTGGAACTGTTGCTCTTCGTGAAATCCGTAAGTATCAGAAGAGTACTGAGCTTTTGATCAGGAAGTTGCCCTTCCAGAGGCTGGTTCGTGAAATTGCCCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCTGTTCTTGCATTGCAAGAGGCAGCGGAGGCTTACCTTGTTGGATTGTTCGAGGACACCAATCTCTGTGCAATCCACGCCAAGCGGGTCACCATAATGCCCAAAGATATCCAGTTGGCTCGGAGAATCAGAGGTGAACGTGCTTAGAAGATGTATTGTTGTTTGGTGAATGGTATTGGCTGCAAGGAGGTGATCAAAAGACCTAATTGATGATGATGAAGGATGATGATGGGGGTGGTTCTTATTTTTGTTTTTAGCAAGGGTTAGTAGATAGTTTTATACTAGAAAAACTTGTAGTGAATATGATAAAAAGGCATAATGCTTTTGGTTGTGCATGTTAATGTTTAGTTGTGGATGATTTTGTTTTTTGTTCTTTTAAAAAAGGATGGAGGAGCTTAATTCTGTATTTCCATTGATGAATTGTGTTTCTGGGGTATGCAGCCAAACTAATATTTGTTGGATAACCTAAACCTATCATATCTAATTTAGTTCAGATTTGTCTTAGTTCATCAAAATTTTCACCTCGTTATGTGTGTGGGTTTCGTGTTTATGTTCTTTTATTAAAGGTGGTTCTTGCTCCAATTTGATATAGTGAGGTTACTACCTGTGCATCTATAATTCAATAGTTCTATCACATCCTTTGGTTACTATCCTCGACTTCTAAATCATCTGCTGTACATTTGTGCTGTGTTCATGATGATACAGTGATGTAGAGTGAAGGGCGTCGATCTTTTTAACAGCAGAT

Coding sequence (CDS)

ATGGTGGCACATCGGGATTGTAAAATCGGTTTCTTTGTAGAACTCTCTCTTTATACTAAAGTGACAAATCTTGAGGAGCTTTACTTTAGAAGGGATCTGGTCGAGAGAGAAGAACCGCCGAAGCGACATCAGGTTATTCCGCTGTCGTCCTTCTCCGCTCTCAATTTTGTTTCTGAGCTTAGGTTTAGGAGAGATTTTAGGGCTTTCTGGATCTCCCTTGGTTACATGGTTCGCATGCTTTCTCAAATTTCTCCCATGGCTCGTACCAAGCAAACTGCCCGTAAATCCACTGGAGGGAAGGCTCCAAGGAAACAGTTGGCTACAAAGGCTGCTCGTAAGTCCGCCCCAACCACAGGAGGAGTGAAGAAGCCACACAGATACCGTCCTGGAACTGTTGCTCTTCGTGAAATCCGTAAGTATCAGAAGAGTACTGAGCTTTTGATCAGGAAGTTGCCCTTCCAGAGGCTGGTTCGTGAAATTGCCCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCTGTTCTTGCATTGCAAGAGGCAGCGGAGGCTTACCTTGTTGGATTGTTCGAGGACACCAATCTCTGTGCAATCCACGCCAAGCGGGTCACCATAATGCCCAAAGATATCCAGTTGGCTCGGAGAATCAGAGGTGAACGTGCTTAG

Protein sequence

MVAHRDCKIGFFVELSLYTKVTNLEELYFRRDLVEREEPPKRHQVIPLSSFSALNFVSELRFRRDFRAFWISLGYMVRMLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Homology

[Close]

BLAST of MELO3C017598.jh1 vs. NCBI nr
Match: TJX43767.1 (histone H3, partial [Soehngenia saccharolytica])

HSP 1 Score: 261 bits (668), Expect = 4.42e-86
Identity = 139/152 (91.45%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 70  WISLGYMVRMLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRP 129
           W +   + R+ S    MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRP
Sbjct: 4   WENRFSLPRLFSYCVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRP 63

Query: 130 GTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 189
           GTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL
Sbjct: 64  GTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 123

Query: 190 FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 221
           FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 124 FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 155

[Close]

BLAST of MELO3C017598.jh1 vs. NCBI nr
Match: XP_041008770.1 (histone H3.3 isoform X1 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 260 bits (664), Expect = 1.20e-85
Identity = 138/143 (96.50%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 79  MLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR 138
           M    S MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR
Sbjct: 1   MTGIFSQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR 60

Query: 139 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 198
           KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI
Sbjct: 61  KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 120

Query: 199 HAKRVTIMPKDIQLARRIRGERA 221
           HAKRVTIMPKDIQLARRIRGERA
Sbjct: 121 HAKRVTIMPKDIQLARRIRGERA 143

[Close]

BLAST of MELO3C017598.jh1 vs. NCBI nr
Match: KAF5765588.1 (putative histone H3/CENP-A, histone-fold protein [Helianthus annuus])

HSP 1 Score: 259 bits (663), Expect = 1.70e-85
Identity = 137/143 (95.80%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 79  MLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR 138
           M   +  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR
Sbjct: 1   MFKTMKNMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIR 60

Query: 139 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 198
           KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI
Sbjct: 61  KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 120

Query: 199 HAKRVTIMPKDIQLARRIRGERA 221
           HAKRVTIMPKDIQLARRIRGERA
Sbjct: 121 HAKRVTIMPKDIQLARRIRGERA 143

[Close]

BLAST of MELO3C017598.jh1 vs. NCBI nr
Match: PWA81313.1 (histone H3 [Artemisia annua])

HSP 1 Score: 262 bits (670), Expect = 1.73e-85
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 76  MVRMLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 135
           +VR ++Q   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 71  LVREIAQDFKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 130

Query: 136 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 195
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 131 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 190

Query: 196 CAIHAKRVTIMPKDIQLARRIRGERA 221
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 191 CAIHAKRVTIMPKDIQLARRIRGERA 216

[Close]

BLAST of MELO3C017598.jh1 vs. NCBI nr
Match: WP_168415035.1 (histone H3, partial [Acinetobacter indicus])

HSP 1 Score: 259 bits (663), Expect = 2.55e-85
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 83  ISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 142
           +S MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 17  LSLMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 76

Query: 143 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 202
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 77  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 136

Query: 203 VTIMPKDIQLARRIRGERA 221
           VTIMPKDIQLARRIRGERA
Sbjct: 137 VTIMPKDIQLARRIRGERA 155

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot
Match: P59169 (Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot
Match: Q6RUR1 (Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot
Match: Q71V89 (Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot
Match: Q3C2E5 (Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot
Match: P69245 (Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL
Match: A0A5B6ZJ50 (Putative histone H3.3 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_013908 PE=3 SV=1)

HSP 1 Score: 266 bits (679), Expect = 1.49e-87
Identity = 148/183 (80.87%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 39  PPKRHQVIPLSSFSALNFVSELRFRRDFRAFWISLGYMVRMLSQISPMARTKQTARKSTG 98
           PPKR Q       ++LN    L  +R    F  +   ++  LS+   MARTKQTARKSTG
Sbjct: 8   PPKRTQRTLCKRVTSLNPPPFLLRKRISPGFEGTSFLVLHFLSKTPEMARTKQTARKSTG 67

Query: 99  GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR 158
           GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR
Sbjct: 68  GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR 127

Query: 159 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 218
           EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 128 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 187

Query: 219 ERA 221
           ERA
Sbjct: 188 ERA 190

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL
Match: T1ND84 (Histone domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1)

HSP 1 Score: 261 bits (667), Expect = 8.12e-86
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 85  PMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 144
           PMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 48  PMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 107

Query: 145 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 204
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 108 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 167

Query: 205 IMPKDIQLARRIRGERA 221
           IMPKDIQLARRIRGERA
Sbjct: 168 IMPKDIQLARRIRGERA 184

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL
Match: A0A2U1P6C9 (Histone H3 OS=Artemisia annua OX=35608 GN=CTI12_AA188520 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 8.37e-86
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 76  MVRMLSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 135
           +VR ++Q   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 71  LVREIAQDFKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 130

Query: 136 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 195
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 131 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 190

Query: 196 CAIHAKRVTIMPKDIQLARRIRGERA 221
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 191 CAIHAKRVTIMPKDIQLARRIRGERA 216

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL
Match: A0A803PD92 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 1.01e-85
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 83  ISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 142
           +S MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 42  VSDMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 101

Query: 143 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 202
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 102 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 161

Query: 203 VTIMPKDIQLARRIRGERA 221
           VTIMPKDIQLARRIRGERA
Sbjct: 162 VTIMPKDIQLARRIRGERA 180

[Close]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL
Match: A0A7J7MB41 (Histone H3 OS=Kingdonia uniflora OX=39325 GN=GIB67_031437 PE=3 SV=1)

HSP 1 Score: 259 bits (662), Expect = 1.25e-85
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 80  LSQISPMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 139
           L  ++ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK
Sbjct: 4   LFDLAYMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 63

Query: 140 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 199
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 64  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 123

Query: 200 AKRVTIMPKDIQLARRIRGERA 221
           AKRVTIMPKDIQLARRIRGERA
Sbjct: 124 AKRVTIMPKDIQLARRIRGERA 145

[Close]

BLAST of MELO3C017598.jh1 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. TAIR 10
Match: AT4G40040.1 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. TAIR 10
Match: AT4G40040.2 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of MELO3C017598.jh1 vs. TAIR 10
Match: AT4G40030.2 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 140/147 (95.24%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 78  RMLSQIS---PMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 137
           R+LS  S    MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL
Sbjct: 18  RVLSHSSLKIKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 77

Query: 138 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 197
           REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN
Sbjct: 78  REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 137

Query: 198 LCAIHAKRVTIMPKDIQLARRIRGERA 222
           LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 138 LCAIHAKRVTIMPKDIQLARRIRGERA 164

[Close]

BLAST of MELO3C017598.jh1 vs. TAIR 10
Match: AT4G40030.3 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 86  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 145
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 146 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 205
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 206 MPKDIQLARRIRGERA 222
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of MELO3C017598.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TJX43767.1	4.42e-86	91.45	histone H3, partial [Soehngenia saccharolytica]	[more]
XP_041008770.1	1.20e-85	96.50	histone H3.3 isoform X1 [Juglans microcarpa x Juglans regia]	[more]
KAF5765588.1	1.70e-85	95.80	putative histone H3/CENP-A, histone-fold protein [Helianthus annuus]	[more]
PWA81313.1	1.73e-85	95.21	histone H3 [Artemisia annua]	[more]
WP_168415035.1	2.55e-85	98.56	histone H3, partial [Acinetobacter indicus]	[more]

BLAST of MELO3C017598.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59169	1.2e-67	100.00	Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2	[more]
Q6RUR1	1.2e-67	100.00	Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3	[more]
Q71V89	1.2e-67	100.00	Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3	[more]
Q3C2E5	1.2e-67	100.00	Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3	[more]
P69245	1.2e-67	100.00	Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2	[more]

BLAST of MELO3C017598.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B6ZJ50	1.49e-87	80.87	Putative histone H3.3 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_013908 P...	[more]
T1ND84	8.12e-86	100.00	Histone domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1	[more]
A0A2U1P6C9	8.37e-86	95.21	Histone H3 OS=Artemisia annua OX=35608 GN=CTI12_AA188520 PE=3 SV=1	[more]
A0A803PD92	1.01e-85	98.56	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A7J7MB41	1.25e-85	96.48	Histone H3 OS=Kingdonia uniflora OX=39325 GN=GIB67_031437 PE=3 SV=1	[more]

BLAST of MELO3C017598.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40030.1	8.6e-69	100.00	Histone superfamily protein	[more]
AT4G40040.1	8.6e-69	100.00	Histone superfamily protein	[more]
AT4G40040.2	8.6e-69	100.00	Histone superfamily protein	[more]
AT4G40030.2	8.6e-69	95.24	Histone superfamily protein	[more]
AT4G40030.3	8.6e-69	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 165..183 score: 82.38 coord: 88..102 score: 97.1 coord: 199..220 score: 94.86 coord: 102..116 score: 92.32 coord: 183..199 score: 96.93 coord: 143..160 score: 97.46 coord: 119..140 score: 91.8
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 119..221 e-value: 1.1E-74 score: 264.1
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 66..221
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 100..106
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 152..160
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 86..217 e-value: 4.6E-53 score: 179.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 87..221 e-value: 3.2E-75 score: 252.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 87..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..128
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 66..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017598.jh1.t1	MELO3C017598.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity