MELO3C017460 (gene) Melon (DHL92) v4

Overview
NameMELO3C017460
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionOxysterol-binding protein-related protein 4B-like
Locationchr02: 22797745 .. 22798194 (+)
RNA-Seq ExpressionMELO3C017460
SyntenyMELO3C017460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACAACCGAAGGTGTTCCATTTCAATGGGAGATGCAACCGGGAACTCCCAAGAGTAATCCGCCGCTCACGGAGGTGATTCCGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTCTCGAAGCCGGTGAGGGTTGTTCAGAATAAACAATCGTTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCTTAATAAGAACAACGAGCGGCTGAGATTTGACTCGTGTGGGTCCCAGTGTGAGTTAATGGCAGAATCTTCGTGTAAAGATAGATCTTCACCGGTGGGGGAATCTTCCGGTCAGTGGCGGCTGGGATGCGGCCCGTGGAGGATCAACCCAATTAAAATAGGTATGGGAAGGCGAGTTTAG

mRNA sequence

ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACAACCGAAGGTGTTCCATTTCAATGGGAGATGCAACCGGGAACTCCCAAGAGTAATCCGCCGCTCACGGAGGTGATTCCGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTCTCGAAGCCGGTGAGGGTTGTTCAGAATAAACAATCGTTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCTTAATAAGAACAACGAGCGGCTGAGATTTGACTCGTGTGGGTCCCAGTGTGAGTTAATGGCAGAATCTTCGTGTAAAGATAGATCTTCACCGGTGGGGGAATCTTCCGGTCAGTGGCGGCTGGGATGCGGCCCGTGGAGGATCAACCCAATTAAAATAGGTATGGGAAGGCGAGTTTAG

Coding sequence (CDS)

ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACAACCGAAGGTGTTCCATTTCAATGGGAGATGCAACCGGGAACTCCCAAGAGTAATCCGCCGCTCACGGAGGTGATTCCGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTCTCGAAGCCGGTGAGGGTTGTTCAGAATAAACAATCGTTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCTTAATAAGAACAACGAGCGGCTGAGATTTGACTCGTGTGGGTCCCAGTGTGAGTTAATGGCAGAATCTTCGTGTAAAGATAGATCTTCACCGGTGGGGGAATCTTCCGGTCAGTGGCGGCTGGGATGCGGCCCGTGGAGGATCAACCCAATTAAAATAGGTATGGGAAGGCGAGTTTAG

Protein sequence

MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
Homology
BLAST of MELO3C017460 vs. NCBI nr
Match: KAA0058273.1 (oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa] >TYK11825.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 9.6e-82
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0

Query: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60
           MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60

Query: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120
           NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS
Sbjct: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120

Query: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
           PVGESSGQWRLGCGPWRINPIKIGMGRRV
Sbjct: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 149

BLAST of MELO3C017460 vs. NCBI nr
Match: XP_004146363.1 (uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical protein Csa_019691 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 4.5e-71
Identity = 134/149 (89.93%), Postives = 137/149 (91.95%), Query Frame = 0

Query: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60
           MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQ
Sbjct: 25  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQ 84

Query: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120
           NKQ LFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRFDSCGSQCELMAESSCK +S+
Sbjct: 85  NKQPLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA 144

Query: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
           P G SSG WRLGCGPWRINPIKIGMGRRV
Sbjct: 145 PAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

BLAST of MELO3C017460 vs. NCBI nr
Match: XP_038878338.1 (uncharacterized protein LOC120070597 [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 116/149 (77.85%), Postives = 123/149 (82.55%), Query Frame = 0

Query: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60
           MSRSSRFYYRRTTEGVPFQWEMQPGTPK+ PPLT+V+PPPISPPPA+LSL  SKP R VQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKNTPPLTDVVPPPISPPPAMLSLSLSKPGRAVQ 60

Query: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120
           NKQ LFVLFGPW KQ     KPKKNPCPLD N + ERLRFDSCGS CE M ESSCK +S 
Sbjct: 61  NKQPLFVLFGPWWKQ----FKPKKNPCPLDHNNDKERLRFDSCGSHCEFMEESSCKAKSL 120

Query: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
              ESSG WR+GCGPWRINPIKI  GRRV
Sbjct: 121 QAAESSGHWRVGCGPWRINPIKIATGRRV 145

BLAST of MELO3C017460 vs. NCBI nr
Match: XP_023007086.1 (uncharacterized protein LOC111499680 [Cucurbita maxima])

HSP 1 Score: 151.4 bits (381), Expect = 6.3e-33
Identity = 88/154 (57.14%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 4   SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQ 63
           S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQ
Sbjct: 28  SRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTEAVTLLITPPPAALSLRPPKPAR-THGKQ 87

Query: 64  SLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS--- 123
           SLF+LF PWRKQ     K KK+ C  D    + R RF SCGSQCE + +S C+ +SS   
Sbjct: 88  SLFLLFRPWRKQ----SKSKKHSCLSD-EFEDGRTRFGSCGSQCEFI-QSPCEPKSSSSS 147

Query: 124 -----PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
                P  ESS   RLGCGPWRINP++I +GRRV
Sbjct: 148 AWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

BLAST of MELO3C017460 vs. NCBI nr
Match: KAG6587751.1 (hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 88/155 (56.77%), Postives = 103/155 (66.45%), Query Frame = 0

Query: 4   SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQ 63
           S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R  Q KQ
Sbjct: 28  SRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTEAVTLLITPPPAALSLRPPKPAR-TQGKQ 87

Query: 64  SLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS--- 123
           SLF+LF PWRKQ     K +K+ C  D    + R RF SCGSQCE + +S C+ +SS   
Sbjct: 88  SLFLLFRPWRKQ----SKSQKHSCLSD-EFEDGRTRFGSCGSQCEFI-QSLCEPKSSSSS 147

Query: 124 ------PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
                 P  ESS   RLGCGPWRINP++I +GRRV
Sbjct: 148 SSWSSLPPAESSAHRRLGCGPWRINPLRIAIGRRV 174

BLAST of MELO3C017460 vs. ExPASy TrEMBL
Match: A0A5D3CJV8 (Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00380 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.6e-82
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0

Query: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60
           MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60

Query: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120
           NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS
Sbjct: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120

Query: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
           PVGESSGQWRLGCGPWRINPIKIGMGRRV
Sbjct: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 149

BLAST of MELO3C017460 vs. ExPASy TrEMBL
Match: A0A0A0LUL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.2e-71
Identity = 134/149 (89.93%), Postives = 137/149 (91.95%), Query Frame = 0

Query: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60
           MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQ
Sbjct: 25  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQ 84

Query: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120
           NKQ LFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRFDSCGSQCELMAESSCK +S+
Sbjct: 85  NKQPLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA 144

Query: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
           P G SSG WRLGCGPWRINPIKIGMGRRV
Sbjct: 145 PAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

BLAST of MELO3C017460 vs. ExPASy TrEMBL
Match: A0A6J1KZJ1 (uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.0e-33
Identity = 88/154 (57.14%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 4   SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQ 63
           S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQ
Sbjct: 28  SRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTEAVTLLITPPPAALSLRPPKPAR-THGKQ 87

Query: 64  SLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS--- 123
           SLF+LF PWRKQ     K KK+ C  D    + R RF SCGSQCE + +S C+ +SS   
Sbjct: 88  SLFLLFRPWRKQ----SKSKKHSCLSD-EFEDGRTRFGSCGSQCEFI-QSPCEPKSSSSS 147

Query: 124 -----PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
                P  ESS   RLGCGPWRINP++I +GRRV
Sbjct: 148 AWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

BLAST of MELO3C017460 vs. ExPASy TrEMBL
Match: A0A6J1EQV3 (uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC111436686 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.9e-33
Identity = 87/154 (56.49%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 4   SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQ 63
           S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQ
Sbjct: 28  SRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTEAVTLLITPPPAALSLRPPKPAR-THGKQ 87

Query: 64  SLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS--- 123
           SLF+LF PWRKQ     K +K+ C  D    + R RF SCGSQCE + +S C+ +SS   
Sbjct: 88  SLFLLFRPWRKQ----SKSQKHSCLSD-EFGDGRTRFGSCGSQCEFI-QSPCEPKSSSSS 147

Query: 124 -----PVGESSGQWRLGCGPWRINPIKIGMGRRV 150
                P  ESS   RLGCGPWRINP++I +GRRV
Sbjct: 148 SWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

BLAST of MELO3C017460 vs. ExPASy TrEMBL
Match: A0A540N405 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008607 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.3e-15
Identity = 70/173 (40.46%), Postives = 83/173 (47.98%), Query Frame = 0

Query: 4   SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPV---RVVQ 63
           SSR YY R+TEGVPF WEMQPGTP+ NPP  E I PPISPPPAVLSLG  KP    ++  
Sbjct: 40  SSRVYYCRSTEGVPFDWEMQPGTPR-NPPKEEAI-PPISPPPAVLSLGLPKPCIDQQLHT 99

Query: 64  NKQSLFVL--FGPWRKQPKPKPKPKKNPCPLDLNKNNERL-RFDSCGSQCELMAESSCKD 123
           NK     L     W K+ K K + K N   L  N   ++  + D C S  E MA SS   
Sbjct: 100 NKPPTSPLHRLKFWSKKSKTKKQRKNN---LQHNGGLDKFDKVDFCSSDSEFMASSSSPR 159

Query: 124 RSSPVGESSGQWRLG---------------------CGPWRINPIKIGMGRRV 150
            SS    SS  +  G                     C PW+++       RRV
Sbjct: 160 NSSSSSSSSFSFSKGQCSSLRSTPARDSFTSSGHFSCSPWKLSSFLTSAARRV 207

BLAST of MELO3C017460 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 4.7e-10
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VR 60
          +SR+S   +Y  R  EGVPF+WEMQPGTP +  P  EV+ PP+SPPPA+LSLG  KP + 
Sbjct: 12 ISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQP-REVV-PPLSPPPAMLSLGLPKPSIS 71

Query: 61 VVQNKQSLF 67
          + + K  +F
Sbjct: 72 IEEPKNFVF 78

BLAST of MELO3C017460 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 62.0 bits (149), Expect = 4.7e-10
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 1  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VR 60
          +SR+S   +Y  R  EGVPF+WEMQPGTP +  P  EV+ PP+SPPPA+LSLG  KP + 
Sbjct: 12 ISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQP-REVV-PPLSPPPAMLSLGLPKPSIS 71

Query: 61 VVQNKQSLF 67
          + + K  +F
Sbjct: 72 IEEPKNFVF 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058273.19.6e-82100.00oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa] >TY... [more]
XP_004146363.14.5e-7189.93uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical ... [more]
XP_038878338.11.3e-5977.85uncharacterized protein LOC120070597 [Benincasa hispida][more]
XP_023007086.16.3e-3357.14uncharacterized protein LOC111499680 [Cucurbita maxima][more]
KAG6587751.11.4e-3256.77hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CJV84.6e-82100.00Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX... [more]
A0A0A0LUL82.2e-7189.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1[more]
A0A6J1KZJ13.0e-3357.14uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680... [more]
A0A6J1EQV38.9e-3356.49uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC1114366... [more]
A0A540N4058.3e-1540.46Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008607 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G25845.14.7e-1052.17BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela... [more]
AT4G25850.24.7e-1052.17OSBP(oxysterol binding protein)-related protein 4B [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..38
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 1..126
NoneNo IPR availablePANTHERPTHR33257:SF6OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATEDcoord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017460.1MELO3C017460.1mRNA