MELO3C017312 (gene) Melon (DHL92) v4

Overview


Name	MELO3C017312
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	VQ motif-containing protein 20
Location	chr02: 24360668 .. 24361417 (-)
RNA-Seq Expression	MELO3C017312
Synteny	MELO3C017312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAAATCAAGAATGAGCCCTCAACAACAAATCCATGGAAAAAGGGATAATCAGATCAATAACAATGGGAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATAATACTACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGTCAATGGGGTCGCTGCTGCTGCTGCTGCTGCTGCGAAGCCACTTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAGTCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATCATGAAGCTTCTACGAAGCTGGCTACAACGAAACCCGTCGTGGATGAGAATAATAATAACAACAAAGGTTCTAAAGCTGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCGGCGGCGGTGGAAGCGGTATGATGGAAGTTGGTCAGGTTAACTCATGTTTTGGTCCGGTGATTTTTGAGCCACCGCCTCCGCCGCCGTCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCCATTTATACGCCGAATTCGATGGAGTTCTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGAGTTGTTAATGATTTCTGCGAATATAGTGAACTTTAG

mRNA sequence

CCTAAATCAAGAATGAGCCCTCAACAACAAATCCATGGAAAAAGGGATAATCAGATCAATAACAATGGGAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATAATACTACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGTCAATGGGGTCGCTGCTGCTGCTGCTGCTGCTGCGAAGCCACTTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAGTCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATCATGAAGCTTCTACGAAGCTGGCTACAACGAAACCCGTCGTGGATGAGAATAATAATAACAACAAAGGTTCTAAAGCTGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCGGCGGCGGTGGAAGCGGTATGATGGAAGTTGGTCAGGTTAACTCATGTTTTGGTCCGGTGATTTTTGAGCCACCGCCTCCGCCGCCGTCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCCATTTATACGCCGAATTCGATGGAGTTCTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGAGTTGTTAATGATTTCTGCGAATATAGTGAACTTTAG

Coding sequence (CDS)

ATGAGCCCTCAACAACAAATCCATGGAAAAAGGGATAATCAGATCAATAACAATGGGAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATAATACTACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGTCAATGGGGTCGCTGCTGCTGCTGCTGCTGCTGCGAAGCCACTTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAGTCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATCATGAAGCTTCTACGAAGCTGGCTACAACGAAACCCGTCGTGGATGAGAATAATAATAACAACAAAGGTTCTAAAGCTGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCGGCGGCGGTGGAAGCGGTATGATGGAAGTTGGTCAGGTTAACTCATGTTTTGGTCCGGTGATTTTTGAGCCACCGCCTCCGCCGCCGTCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCCATTTATACGCCGAATTCGATGGAGTTCTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGAGTTGTTAATGATTTCTGCGAATATAGTGAACTTTAG

Protein sequence

MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFCEYSEL

Homology

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BLAST of MELO3C017312 vs. NCBI nr
Match: XP_008453685.1 (PREDICTED: VQ motif-containing protein 20 [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 6.3e-131
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT 60
           MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT
Sbjct: 1   MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT 60

Query: 61  SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK 120
           SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK
Sbjct: 61  SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK 120

Query: 121 LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV 180
           LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV
Sbjct: 121 LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV 180

Query: 181 IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC 240
           IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC
Sbjct: 181 IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC 240

Query: 241 EYSEL 246
           EYSEL
Sbjct: 241 EYSEL 245

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BLAST of MELO3C017312 vs. NCBI nr
Match: XP_004138347.3 (VQ motif-containing protein 20 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 219/255 (85.88%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 1   MSP---QQQIHGKRDNQINNNG-NKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSS 60
           MSP   QQQIHGK DNQI NNG NKPILCPPPLKINKDSHLIRKTSSSSN  TSSPSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSN--TSSPSSSS 60

Query: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSD-DH 120
           SSTTSL NGV  AAAAA  P QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSD DH
Sbjct: 61  SSTTSLANGV--AAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDH 120

Query: 121 EAS-TKLATTKPVVDE----NNNNNKGSK-AVVSDDNESSSVVTTDENCCGGGGGSGMME 180
           EAS TKLATTK  VDE    NNNNNKGSK AVV+DDNESSSVVTTDENCC GGGGSG+ME
Sbjct: 121 EASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCC-GGGGSGLME 180

Query: 181 VGQVNSCFGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLL 240
           VGQVNSCFGP IFEPP     PPPPQLANSYLTNIPIYTPNS EFLC NQPIFNYDDSLL
Sbjct: 181 VGQVNSCFGPAIFEPP-----PPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLL 240

Query: 241 FGGNRVVNDFCEYSE 245
           FGGNR VNDFCEYSE
Sbjct: 241 FGGNRSVNDFCEYSE 245

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BLAST of MELO3C017312 vs. NCBI nr
Match: KGN62345.1 (hypothetical protein Csa_018596 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 192/250 (76.80%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MSP--QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSS 60
           MSP  QQQIHGKRDNQ NNN NKP+  PP LKINKDSHLIRK+SSSSN  TSSPSSSSSS
Sbjct: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSN--TSSPSSSSSS 60

Query: 61  TTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEAS 120
           TTSL+NGV     AAAKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EAS
Sbjct: 61  TTSLLNGV--IPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EAS 120

Query: 121 TKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFG 180
           TK AT K VVDENN  +K    VV+DDNESSSVVTTDENCCGG G SG +E GQVNSCFG
Sbjct: 121 TK-ATAKSVVDENNKASK----VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFG 180

Query: 181 PVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGN----- 240
           P IFEPPPP   PPPPQLA+SYL+NIP+Y PNS EFLC NQPIFNYDDSLLFG N     
Sbjct: 181 PAIFEPPPP---PPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLS 237

Query: 241 -RVVNDFCEY 243
              V+DF E+
Sbjct: 241 SNGVSDFSEF 237

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BLAST of MELO3C017312 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 327.8 bits (839), Expect = 8.1e-86
Identity = 197/256 (76.95%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 3   PQQQIHGKRDNQ---INN---NGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSS 62
           PQQQ+HGKRDNQ   INN   NGNKP LCPPPLKINKDSHLIRK+SSSSN  TSSPSSSS
Sbjct: 5   PQQQLHGKRDNQNQSINNGNGNGNKP-LCPPPLKINKDSHLIRKSSSSSN--TSSPSSSS 64

Query: 63  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHE 122
           SSTTSLVNGV        KP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD E
Sbjct: 65  SSTTSLVNGV--------KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-E 124

Query: 123 ASTKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSC 182
           ASTK ATTK  VDENN  +K  KAVV+DDNESSSVVTTDENCC  GGGSG++E GQVNSC
Sbjct: 125 ASTK-ATTKS-VDENNKGSK--KAVVNDDNESSSVVTTDENCC--GGGSGVVEGGQVNSC 184

Query: 183 FGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQP-IFNYDDSLLFGGNRV 242
           FG  IFEPPPP   PPPPQLANSYLTNIP+Y PNS EFLC NQP  FNYDDSLLFG + +
Sbjct: 185 FGAAIFEPPPP---PPPPQLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFGAHNI 239

Query: 243 -------VNDFCEYSE 245
                  +NDFCEYSE
Sbjct: 245 PSLSSNGINDFCEYSE 239

[Close]

BLAST of MELO3C017312 vs. NCBI nr
Match: KAA0061038.1 (VQ motif-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 4.0e-85
Identity = 192/252 (76.19%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 1   MSP---QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSS 60
           MSP   QQQIHGKRDNQINNN NKP L PP LKINKDSHLIRK+SSSSN  TSSPSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKP-LSPPSLKINKDSHLIRKSSSSSN--TSSPSSSSS 60

Query: 61  STTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEA 120
           STTSLVNGV     A AKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EA
Sbjct: 61  STTSLVNGV---PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EA 120

Query: 121 STKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCF 180
           STK AT K  VDENN  +K    VV+DDNESSSV+TTDENCC G G SG +E GQVNSCF
Sbjct: 121 STK-ATAKS-VDENNKVSK----VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCF 180

Query: 181 GPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV-- 240
           GP  FEPPPPPP PPPPQLANSYLTN+P+Y PNS EFLC NQPIFNYDDSLLFGG+ +  
Sbjct: 181 GPASFEPPPPPP-PPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPS 238

Query: 241 -----VNDFCEY 243
                ++DF E+
Sbjct: 241 LSSNGISDFSEF 238

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BLAST of MELO3C017312 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-30
Identity = 110/277 (39.71%), Postives = 140/277 (50.54%), Query Frame = 0


Query: 8   HGKRDNQINNNG----NKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTTSLV 67
           H KR+   NN+G      P   PP LK+NKDSH+I+K          SPSS SS      
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK--------PPSPSSFSS------ 80

Query: 68  NGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDH-------- 127
                    AAKP  RHPVIIYTH+P++IHT+P+DFMALVQKLTGM+ SD+         
Sbjct: 81  ---------AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMT 140

Query: 128 ----EASTKLATTKPVVDENNN------------------NNKG---SKAVVSDDNESSS 187
                 S     ++P VD  NN                  N KG   +  ++S+D+ESSS
Sbjct: 141 DPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSS 200

Query: 188 VVTTDENCCGGGGGSGMMEVGQVNSC--FGPVIF--EPPP-PPPSPPPPQLAN------- 234
           V+TT+EN         + E GQVNS   +  V    +PPP PPP PPPP + +       
Sbjct: 201 VITTEEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYG 260

[Close]

BLAST of MELO3C017312 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 44/125 (35.20%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 11  RDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTTSLVNGVAAAA 70
           R N+IN +       P  LK+  +SH I+KTSS  +       +S               
Sbjct: 5   RCNEINGSR------PSSLKLAGESHTIKKTSSCKSKPRPHGRAS--------------- 64

Query: 71  AAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMS---RSDDHEASTKLATTKPV 130
                     PVIIY HSPKVIHT   DFMALVQ+LTG+    R +  E+S+ + T +  
Sbjct: 65  ----------PVIIYAHSPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN 98

Query: 131 VDENN 133
           V ++N
Sbjct: 125 VGDDN 98

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BLAST of MELO3C017312 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.0e-131
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT 60
           MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT
Sbjct: 1   MSPQQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTT 60

Query: 61  SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK 120
           SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK
Sbjct: 61  SLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTK 120

Query: 121 LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV 180
           LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV
Sbjct: 121 LATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFGPV 180

Query: 181 IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC 240
           IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC
Sbjct: 181 IFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVVNDFC 240

Query: 241 EYSEL 246
           EYSEL
Sbjct: 241 EYSEL 245

[Close]

BLAST of MELO3C017312 vs. ExPASy TrEMBL
Match: A0A0A0LPK7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.6e-87
Identity = 190/248 (76.61%), Postives = 194/248 (78.23%), Query Frame = 0


Query: 1   MSP---QQQIHGKRDNQINNNG-NKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSS 60
           MSP   QQQIHGK DNQI NNG NKPILCPPPLKINKDSHLIRKTSSSSN  TSSPSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSN--TSSPSSSS 60

Query: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHE 120
           SSTTSL NGV  AAAAA  P QRHPVIIYTHSPK+IHTHPRDFMALVQKLTG+       
Sbjct: 61  SSTTSLANGV--AAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGICCC---- 120

Query: 121 ASTKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSC 180
                                  AVV+DDNESSSVVTTDENCC GGGGSG+MEVGQVNSC
Sbjct: 121 ---------------------KAAVVNDDNESSSVVTTDENCC-GGGGSGLMEVGQVNSC 180

Query: 181 FGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVV 240
           FGP IFEPP     PPPPQLANSYLTNIPIYTPNS EFLC NQPIFNYDDSLLFGGNR V
Sbjct: 181 FGPAIFEPP-----PPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSV 213

Query: 241 NDFCEYSE 245
           NDFCEYSE
Sbjct: 241 NDFCEYSE 213

[Close]

BLAST of MELO3C017312 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86
Identity = 192/250 (76.80%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MSP--QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSS 60
           MSP  QQQIHGKRDNQ NNN NKP+  PP LKINKDSHLIRK+SSSSN  TSSPSSSSSS
Sbjct: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSN--TSSPSSSSSS 60

Query: 61  TTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEAS 120
           TTSL+NGV     AAAKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EAS
Sbjct: 61  TTSLLNGV--IPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EAS 120

Query: 121 TKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFG 180
           TK AT K VVDENN  +K    VV+DDNESSSVVTTDENCCGG G SG +E GQVNSCFG
Sbjct: 121 TK-ATAKSVVDENNKASK----VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFG 180

Query: 181 PVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGN----- 240
           P IFEPPPP   PPPPQLA+SYL+NIP+Y PNS EFLC NQPIFNYDDSLLFG N     
Sbjct: 181 PAIFEPPPP---PPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLS 237

Query: 241 -RVVNDFCEY 243
              V+DF E+
Sbjct: 241 SNGVSDFSEF 237

[Close]

BLAST of MELO3C017312 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.9e-85
Identity = 192/252 (76.19%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 1   MSP---QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSS 60
           MSP   QQQIHGKRDNQINNN NKP L PP LKINKDSHLIRK+SSSSN  TSSPSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKP-LSPPSLKINKDSHLIRKSSSSSN--TSSPSSSSS 60

Query: 61  STTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEA 120
           STTSLVNGV     A AKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EA
Sbjct: 61  STTSLVNGV---PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EA 120

Query: 121 STKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCF 180
           STK AT K  VDENN  +K    VV+DDNESSSV+TTDENCC G G SG +E GQVNSCF
Sbjct: 121 STK-ATAKS-VDENNKVSK----VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCF 180

Query: 181 GPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV-- 240
           GP  FEPPPPPP PPPPQLANSYLTN+P+Y PNS EFLC NQPIFNYDDSLLFGG+ +  
Sbjct: 181 GPASFEPPPPPP-PPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPS 238

Query: 241 -----VNDFCEY 243
                ++DF E+
Sbjct: 241 LSSNGISDFSEF 238

[Close]

BLAST of MELO3C017312 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.9e-85
Identity = 192/252 (76.19%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 1   MSP---QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSS 60
           MSP   QQQIHGKRDNQINNN NKP L PP LKINKDSHLIRK+SSSSN  TSSPSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKP-LSPPSLKINKDSHLIRKSSSSSN--TSSPSSSSS 60

Query: 61  STTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEA 120
           STTSLVNGV     A AKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EA
Sbjct: 61  STTSLVNGV---PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EA 120

Query: 121 STKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCF 180
           STK AT K  VDENN  +K    VV+DDNESSSV+TTDENCC G G SG +E GQVNSCF
Sbjct: 121 STK-ATAKS-VDENNKISK----VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCF 180

Query: 181 GPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV-- 240
           GP  FEPPPPPP PPPPQLANSYLTN+P+Y PNS EFLC NQPIFNYDDSLLFGG+ +  
Sbjct: 181 GPASFEPPPPPP-PPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPS 238

Query: 241 -----VNDFCEY 243
                ++DF E+
Sbjct: 241 LSSNGISDFSEF 238

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BLAST of MELO3C017312 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-31
Identity = 110/277 (39.71%), Postives = 140/277 (50.54%), Query Frame = 0


Query: 8   HGKRDNQINNNG----NKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTTSLV 67
           H KR+   NN+G      P   PP LK+NKDSH+I+K          SPSS SS      
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK--------PPSPSSFSS------ 80

Query: 68  NGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDH-------- 127
                    AAKP  RHPVIIYTH+P++IHT+P+DFMALVQKLTGM+ SD+         
Sbjct: 81  ---------AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMT 140

Query: 128 ----EASTKLATTKPVVDENNN------------------NNKG---SKAVVSDDNESSS 187
                 S     ++P VD  NN                  N KG   +  ++S+D+ESSS
Sbjct: 141 DPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSS 200

Query: 188 VVTTDENCCGGGGGSGMMEVGQVNSC--FGPVIF--EPPP-PPPSPPPPQLAN------- 234
           V+TT+EN         + E GQVNS   +  V    +PPP PPP PPPP + +       
Sbjct: 201 VITTEEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYG 260

[Close]

BLAST of MELO3C017312 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 44/125 (35.20%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 11  RDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSSTTSLVNGVAAAA 70
           R N+IN +       P  LK+  +SH I+KTSS  +       +S               
Sbjct: 5   RCNEINGSR------PSSLKLAGESHTIKKTSSCKSKPRPHGRAS--------------- 64

Query: 71  AAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMS---RSDDHEASTKLATTKPV 130
                     PVIIY HSPKVIHT   DFMALVQ+LTG+    R +  E+S+ + T +  
Sbjct: 65  ----------PVIIYAHSPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN 98

Query: 131 VDENN 133
           V ++N
Sbjct: 125 VGDDN 98

[Close]

BLAST of MELO3C017312 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 7.4e-05
Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 26  PPPLKINKDSH-LIRKTSSSSNNTTSSPSSSSSSTTSLVNGVAAAAAAAAKPLQRHPVII 85
           P PLK+  DSH +I+K   +  +    P  +     S            ++P    PVII
Sbjct: 16  PIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPS-----------QSRP-PPGPVII 75

Query: 86  YTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTKLATTKP 127
           YT SP++IHTHP +FM LVQ+LTG + +    +S   +T+ P
Sbjct: 76  YTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAP 105

[Close]

BLAST of MELO3C017312 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 26  PPPLKINKDSH-LIRKTSSSSNNTTSSPSSSSSSTTSLVNGVAAAAAAAAKPLQRHPVII 85
           P PLK+  DSH +I+K   +  +    P  +     S            ++P    PV I
Sbjct: 16  PTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPS-----------QSRP-PPGPVNI 75

Query: 86  YTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEASTKLATTKP 127
           YT +P++IHTHP +FM LVQ+LTG + +    +S+  +T++P
Sbjct: 76  YTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEP 105

The following BLAST results are available for this feature:

BLAST of MELO3C017312 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453685.1	6.3e-131	100.00	PREDICTED: VQ motif-containing protein 20 [Cucumis melo]	[more]
XP_004138347.3	1.4e-101	85.88	VQ motif-containing protein 20 [Cucumis sativus]	[more]
KGN62345.1	2.8e-86	76.80	hypothetical protein Csa_018596 [Cucumis sativus]	[more]
XP_038876677.1	8.1e-86	76.95	VQ motif-containing protein 20 [Benincasa hispida]	[more]
KAA0061038.1	4.0e-85	76.19	VQ motif-containing protein 20-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C017312 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	2.9e-30	39.71	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	3.3e-05	35.20	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of MELO3C017312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXM8	3.0e-131	100.00	VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1	[more]
A0A0A0LPK7	4.6e-87	76.61	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=...	[more]
A0A0A0LKA6	1.3e-86	76.80	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A5A7V0G0	1.9e-85	76.19	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	1.9e-85	76.19	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]

BLAST of MELO3C017312 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	2.1e-31	39.71	VQ motif-containing protein	[more]
AT1G68450.1	2.3e-06	35.20	VQ motif-containing protein	[more]
AT1G21326.1	7.4e-05	35.29	VQ motif-containing protein	[more]
AT1G21320.1	1.3e-04	33.33	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 86..110 e-value: 5.9E-12 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..240
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017312.1	MELO3C017312.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response