MELO3C017179 (gene) Melon (DHL92) v4

Overview


Name	MELO3C017179
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	HNH domain-containing protein
Location	chr02: 25350691 .. 25353739 (+)
RNA-Seq Expression	MELO3C017179
Synteny	MELO3C017179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATACCACAGACGACATGTCGTTTGGGAAGTGAAATGAAATAACAGATAAGGTGGAGTTCCCATTATGACCTCTCAAATTATCCAAGAAAGGGTCAAAGTCAAAGATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGTAGTTCCCCTTTCCGAATTCTGATTTTTTGTAATTCCTCTGTTTTAGGACTGTTGTGAGGTGTTTTTGTTTCGTTTTCGTAATTTAGGCTGTGGGATGGAAATGAGTAAGAACTCTTGATAATGTGTTCATTAGAGACATGGTAATACATTACTTCCAATTCTAGTTGGCCCATGCTGAAATTAGCTTGGTGGGTTCTTCTTCTTTGTACATATATGGGTTAGGCTTGTCATTTTTAATGTATCGTGACTTGAAAATCTTCAATTTCTGTTTCTATTTAGACTATCACATGTATTTAACAAGTTGTTTTCAATTATAGTATTGGATATTTGACGATTGTATATGGTTGTGGAATTGTTTTATAATCTTCTCTTCTCTCTCTCTCCCAGAAGATTTGTGTACAATATTGTTTTTTTATTGCTTCCTAAGTTTTTGTGGACTTTACCAACCAAAGAGATAGCATTGGAAGATGTCTAACAGTTTATGCGAATGGAAGCTTAGTATGGGCAACTAAATGTGTTAAGAAATGAATGAACCAATGAAATGAAAATTAAATTACTTTGGATACAGTTAATTATCAGTAAGCATGAACTTCTTTGTGACTTCAAAATTTCAAGGGAGGTTTGGGATCTTAATTCTAATTGATTGTGAATATTCCATTAGTCATCCCTTCAGTATCATTTTTTCTATTTTCTGAAAAGTTGAGTACGAGGTTCCAAGAGTCTACATGTTATGAAGTATCTTTGCCATATTTATTTCTTAATAAATTCAGTAAGTGTTCATGAGTTACTCTTCGGGCTGAATATGAATACTTCATATTGCAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGTAATAATCCTAACGACTTTCCTTTGTCCCATCCAAACTTCACTTAGTATTGTTTTCAACCTTCGCTTAGTTTGCGCTGTTTTTCGGAAGATAGGCAGCATTAAGGAGGACCAAGAGGATATTATATTATAGAGGACAGAGCTACTGATTGTTCTGTTTGCTAAATAATGTGTCCCCCATGGCCAGATGTTACTACATAATAGTTCTTAATGCTTTGTTGACCGTGCTTCTGACTGTCTTTTCAATTATTTGATTGTCTCATCTCTCAAACTTTTCCTTTCACGTACTGAAGGATGAACACTGTTCCCTCATGGCTTGTCATAGTTGATTGTTCTTCTTTAACCAGGGACCTGCCCTTAGATACTAGAGTTTACAAGAGTTAATTACTTGCTAGATTATAATTGAAAATTCTTTATTCAGATTTTTCTATTCATCATGTGCAAGAGGACGTTACATAGTTTTACATTTGACTCTTTTACATTATTCACTATTGTAAAGTCAGAGGGTTGTTAATCCGGGAAGGACGTACAATCACGCAGCATTGTGGTTAATACATCTTGTCTTTGTTTAAATTTACTTCCCAAATAACTTTGGAAGCCAAAACTTTGATTCAATCATTTTTTGAAGAATCATTTTAAATTTAATTATTCAAAAGATACTTCTTAAGTGATTCAATCACTTTGGAACCAATTTTACTGTGATTTATTATTTGTAGAATCGGCTTTAGATATAGTGCAACAAAACAAACTTGATTAAAAATCACCTTTAGAAAATGTATCCACACTAGAATTTTAATTAAAATAAATTTTCTTAAGAGGTACCGATCGAATACAAAAATACCACACTACTAACTGTTATATATTTGGTGGTTTGCTATAATTTCTATATCTCATAACAGTTTGAATTATTTTGTTTGCCAATAATTTCAAATAATTGGTTTCGTTACTCAAACGATTCTTTATTGCAAGAAAGAATTCTTCCAAATTCCTACTCCCAATTCCCTTCATCTTCTTCTTATTTTTTTTTTCTATGTTGTTTAGTAGTTAGCATATTGCGTTATGATTATTATCTTCTGATGGCTGTATTATTCACGATGTAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTACATTAGCCTGATTAAACAACATATCTAAGGGTATTCACTTACACCTTGGTGATGATATCATATGGTCAATATGTTTACATAATTTACAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGACTAATTGAGTTGATTATATTATAACCTCTTGTAAGAATTGATTCCAGGGTAAGACATGGAAACTTAACAAAAAAGAAACAAAAAGATTGAAATGAAAAAAGTAGGGAATTTTTCACGTGTTCTTATTTCATTCCTTTATAGATCAACAAGTACGTGTATGCATCGTTTATGAGAACAAGCTCATTGGTTGTTGTATACTTTATGCCTTAATGCCTGATCTGATGTGTGTGGGATCTATGATTGAATGGTTATTGTAGTTCAAAAGAAAGTTTGATCATATTGGAAAGGAAAGAAGTGAAAGAAAAAACATGAAATGGAAGTTTCT

mRNA sequence

ATATACCACAGACGACATGTCGTTTGGGAAGTGAAATGAAATAACAGATAAGGTGGAGTTCCCATTATGACCTCTCAAATTATCCAAGAAAGGGTCAAAGTCAAAGATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGACTAATTGAGTTGATTATATTATAACCTCTTGTAAGAATTGATTCCAGGGTAAGACATGGAAACTTAACAAAAAAGAAACAAAAAGATTGAAATGAAAAAAGTAGGGAATTTTTCACGTGTTCTTATTTCATTCCTTTATAGATCAACAAGTACGTGTATGCATCGTTTATGAGAACAAGCTCATTGGTTGTTGTATACTTTATGCCTTAATGCCTGATCTGATGTGTGTGGGATCTATGATTGAATGGTTATTGTAGTTCAAAAGAAAGTTTGATCATATTGGAAAGGAAAGAAGTGAAAGAAAAAACATGAAATGGAAGTTTCT

Coding sequence (CDS)

ATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Protein sequence

MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

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BLAST of MELO3C017179 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 407.9 bits (1047), Expect = 5.0e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 5.2e-107
Identity = 195/200 (97.50%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101
Identity = 186/200 (93.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRR+KESKKKTR SSPLRDRTG PTSLES RYGS+PSSLSPSASLLDRDL+TGE++LLGD
Sbjct: 1   MRRNKESKKKTRSSSPLRDRTGDPTSLESRRYGSNPSSLSPSASLLDRDLITGEASLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDP RWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDLVSDYNPRSFPHSVKQQCWDKAEKIKGRDPSRWRRDALGNIVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-98
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+ SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-98
Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.5e-107
Identity = 195/200 (97.50%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.7e-98
Identity = 180/200 (90.00%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT      ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of MELO3C017179 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-63
Identity = 125/199 (62.81%), Postives = 144/199 (72.36%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKF 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+          ++  
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----------EMGL 112

Query: 64  SPNDSVSNYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLC 123
            P     + N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLC
Sbjct: 113 FPGSGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLC 172

Query: 124 HDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLE 183
           HDYDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+E
Sbjct: 173 HDYDHIVPYSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIE 232

Query: 184 LSAYGNVHRGQDSGGCRIQ 201
           L+AYGNV R   S GCRIQ
Sbjct: 233 LTAYGNVQRAPTSSGCRIQ 234

[Close]

BLAST of MELO3C017179 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59
Identity = 125/219 (57.08%), Postives = 144/219 (65.75%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKF 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+          ++  
Sbjct: 14  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----------EMGL 73

Query: 64  SPNDSVSNYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLC 123
            P     + N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLC
Sbjct: 74  FPGSGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLC 133

Query: 124 HDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRA 183
           HDYDHI+PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+
Sbjct: 134 HDYDHIVPYSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRS 193

Query: 184 ELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 201
           ELIQ+SSYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 194 ELIQRSSYCRVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of MELO3C017179 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 70/131 (53.44%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKF 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+          ++  
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----------EMGL 112

Query: 64  SPNDSVSNYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLC 123
            P     + N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLC
Sbjct: 113 FPGSGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLC 166

Query: 124 HDYDHILPYSK 133
           HDYDHI+PYSK
Sbjct: 173 HDYDHIVPYSK 166

[Close]

BLAST of MELO3C017179 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 74  PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKG 133
           PR F    K +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKG
Sbjct: 40  PRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGNCNGCLCFEYDHIVPYSKG 99

Query: 134 GKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD 193
           G+S  ENCQ+LQ  VNR K  +  +    L   S   + + +++D++E++ YG+V R   
Sbjct: 100 GESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDKELDVIEMAVYGDVLRPGK 159

Query: 194 SGGCR 199
              C+
Sbjct: 160 ECRCK 164

The following BLAST results are available for this feature:

BLAST of MELO3C017179 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453210.1	5.0e-110	100.00	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_004138170.1	5.2e-107	97.50	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_038880609.1	1.5e-101	93.00	uncharacterized protein LOC120072255 [Benincasa hispida]	[more]
XP_023529236.1	3.4e-98	90.50	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]
XP_022972967.1	3.4e-98	90.50	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]

BLAST of MELO3C017179 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C017179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US43	2.4e-110	100.00	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	2.4e-110	100.00	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A0A0LUI5	2.5e-107	97.50	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A6J1I688	1.6e-98	90.50	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A6J1EZE0	4.7e-98	90.00	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of MELO3C017179 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	2.9e-63	62.81	HNH endonuclease	[more]
AT3G47490.3	1.1e-59	57.08	HNH endonuclease	[more]
AT3G47490.2	1.2e-29	53.44	HNH endonuclease	[more]
AT1G18680.1	1.5e-27	41.60	HNH endonuclease domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 122..155 e-value: 1.5E-4 score: 21.9
None	No IPR available	GENE3D	1.10.30.50		coord: 79..172 e-value: 4.6E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 5..200
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 5..200
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 109..153 e-value: 1.51749E-5 score: 39.3772

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017179.1	MELO3C017179.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding