![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MELO3C017169 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTCTGCAGCAGGCTCAACACCCAGACCGGCGAAGAAGGGAGGAAGAATCATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTCGTCAAAACCCCTGGTAAACTCTCGGATTCCTTCCCATTGCTATTCTATCAAGTCTTTTTGAACTTCAATGTCAATCTATCGTTTTTCGTATTTATTGACTCTGTTCTTATCATCTTCTTTTATTTTGTGTTTAGGCGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGGTATGTATTTTATCACTTAATTTTGTTTATGATGCTTATGTTATCTCTTTGTAGTCTACATCTTTGCGGTAAATACCTTTAGAACCTATTTTGTTGACAAGGAAAGATTATATAAAAACCGATGCAGATAGTATTTTCTTGTTGCCGCATTTGTGTTTCATTAGGGAAAGAATTTGGTCTCCCAGTACTGAAATTATGGATTTTGGTTCTTTATGATCGTTATATTACCTGTTACTGAATGACAGTCTTTACGGGCTAATGTGCTCTCATAATCAAAATATACTGTTCTATACTTTTTTTAGGATATCATATTCTTGAACAGAAGGGTAATTTGTATTACTTCTCTATAATTGTCGGAAGGATTCTTTACTGACCTAAACTTGATTCCCAAAGTTTGACTCCACATTCATTTGAACTGATTCCTAATGATACTCCTGCAAAATATCCTTTCATTTTATACATTAAGATATAATAGATGCTTTATCCTTGGGTCTCTTCTCAAAAAGGTGTTGATAATTGTTCGGTTTTCAATTTTGGGATTACTTATATTGATATTCACACCTCTTTGCACCACACCAACATGTCTATCTATACTAGGTCCATTCATTGTAGATTGGTTGATGCATGCATGTAAATTTACGCATCACTACATGCACTATTTATATGTTGGTAGACACACTCGCATTTGCATTTGGTACTTTGGTTGATTTTTGAACTATATGATAGATAGTCTTGTAAATTTAAGTATGGTTTTTAGAAATTGGGTGTTTTGTATTTTTGTTCATTTGCGTTTCAATCTTTTGGTGAAGATGGCTCAATCCCGATTGTGTTAAGTTAATCTGTGTAAGTTTATTATTGCAGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTAGCTAGGAACCGCAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGCAGTGCTGTGAGGGAGAGGTTGGCTTCTCACTGTGTCTCATCGCTTGTTCTTTCATCTGTTTGATTATATTTATGATAGTAAGGTATTGTGCTAATCTTTATTTGGTTTGGGATAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAAATTGATTGTGTTGGTGGTTTTTTTTTTTTAGAAAATCGATGAAATTTTGACTGTTTTTTGTGATGTGATGCTGAATTTTAGCGATTACTATTTATTTAAAGTTTGTTTTTGGAAGAACGATGTAGAAGATGTCAAAGTATTGACTGTTTTTAGCATTTGAGTTGATTGAAGATTTAATTAAAGACAACTAAGAAGACCTACTGCTTGAAGCAGGTGGTTGGTATGGTAAATAAGCCAATTAATATTGAACTAAGAAATTTCATGCTCAATGTTCT AATTCTCTGCAGCAGGCTCAACACCCAGACCGGCGAAGAAGGGAGGAAGAATCATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTCGTCAAAACCCCTGGCGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTAGCTAGGAACCGCAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGCAGTGCTGTGAGGGAGAGGTTGGCTTCTCACTGTGTCTCATCGCTTGTTCTTTCATCTGTTTGATTATATTTATGATAGTAAGGTATTGTGCTAATCTTTATTTGGTTTGGGATAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAAATTGATTGTGTTGGTGGTTTTTTTTTTTTAGAAAATCGATGAAATTTTGACTGTTTTTTGTGATGTGATGCTGAATTTTAGCGATTACTATTTATTTAAAGTTTGTTTTTGGAAGAACGATGTAGAAGATGTCAAAGTATTGACTGTTTTTAGCATTTGAGTTGATTGAAGATTTAATTAAAGACAACTAAGAAGACCTACTGCTTGAAGCAGGTGGTTGGTATGGTAAATAAGCCAATTAATATTGAACTAAGAAATTTCATGCTCAATGTTCT ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTCGTCAAAACCCCTGGCGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTAGCTAGGAACCGCAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGCAGTGCTGTGAGGGAGAGGTTGGCTTCTCACTGTGTCTCATCGCTTGTTCTTTCATCTGTTTGA MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERLASHCVSSLVLSSV Homology
BLAST of MELO3C017169 vs. NCBI nr
Match: KAE8652419.1 (hypothetical protein Csa_013568 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of MELO3C017169 vs. NCBI nr
Match: XP_021597596.1 (60S ribosomal protein L34-like [Manihot esculenta] >OAY61404.1 hypothetical protein MANES_01G185900v8 [Manihot esculenta]) HSP 1 Score: 180.3 bits (456), Expect = 8.8e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. NCBI nr
Match: XP_027098139.1 (60S ribosomal protein L34 [Coffea arabica] >XP_027153728.1 60S ribosomal protein L34 [Coffea eugenioides]) HSP 1 Score: 180.3 bits (456), Expect = 8.8e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. NCBI nr
Match: XP_004138165.3 (60S ribosomal protein L34 [Cucumis sativus] >XP_004147322.1 60S ribosomal protein L34 [Cucumis sativus] >XP_008453201.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >XP_008453217.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >XP_008460833.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >KAA0057939.1 60S ribosomal protein L34 [Cucumis melo var. makuwa] >KAA0057954.1 60S ribosomal protein L34 [Cucumis melo var. makuwa] >KAA0063093.1 60S ribosomal protein L34 [Cucumis melo var. makuwa] >KGN62245.1 hypothetical protein Csa_016921 [Cucumis sativus] >KGN63670.2 hypothetical protein Csa_013763 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 8.8e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. NCBI nr
Match: XP_038889603.1 (60S ribosomal protein L34 [Benincasa hispida]) HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41 Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy Swiss-Prot
Match: P41098 (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 2.8e-43 Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy Swiss-Prot
Match: P40590 (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 4.9e-43 Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy Swiss-Prot
Match: Q42351 (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.1e-42 Identity = 85/91 (93.41%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy Swiss-Prot
Match: Q9FE65 (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 4.1e-42 Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy Swiss-Prot
Match: Q9LJW6 (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.5e-41 Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy TrEMBL
Match: A0A1S3BV34 (60S ribosomal protein L34 OS=Cucumis melo OX=3656 GN=LOC103493989 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy TrEMBL
Match: A0A5A7UWQ0 (60S ribosomal protein L34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00210 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy TrEMBL
Match: A0A6P6V549 (60S ribosomal protein L34 OS=Coffea arabica OX=13443 GN=LOC113717585 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy TrEMBL
Match: A0A0A0LK03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338890 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. ExPASy TrEMBL
Match: A0A2C9WPM8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G185900 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C017169 vs. TAIR 10
Match: AT1G26880.2 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 174.9 bits (442), Expect = 3.5e-44 Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of MELO3C017169 vs. TAIR 10
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 173.7 bits (439), Expect = 7.7e-44 Identity = 85/91 (93.41%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of MELO3C017169 vs. TAIR 10
Match: AT1G69620.1 (ribosomal protein L34 ) HSP 1 Score: 171.8 bits (434), Expect = 2.9e-43 Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of MELO3C017169 vs. TAIR 10
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 168.3 bits (425), Expect = 3.2e-42 Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|