MELO3C016764 (gene) Melon (DHL92) v4

Overview


Name	MELO3C016764
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein ROOT INITIATION DEFECTIVE 3
Location	chr07: 2206934 .. 2210580 (+)
RNA-Seq Expression	MELO3C016764
Synteny	MELO3C016764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGCGCTAAACATCGTTTTGGTTGCCGCGCTGTTTTTCATCCACCGCACCGCCATAAATTATTCCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCAGAATGGTGCTACTGGTTGCTTCGTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTTCATACCGGCGCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCCCCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTCGCGTGCTCTCAGCTTCGCGATGCTGCAGCTACTGCTGGCTCCGTTCTCTACTGGTCTTGGTGTAAGGTACTTGTTATTGTAACGAATTTCAACTCTCTGTTCCTCAATACTCTGCTTAATTAATTTTTCTTCCTACAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACAATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTAAATTTTGATTTAATAAATTTTGCTCTGCCATTGAACTCTAAAATTATCGTCTTCTTATTCTATTAATTGGCACATTCTTGGCTGTAGTATAAGATGAATTGCTCGTTGTTGTAGGTTTTAAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTTTTCTCTGAAGATGACTCCCTGTTAATTTCTGGTTCTGAAGACGGCTGCATTAGAGTTTGGTCCCTTATAACGTATAAAATTTCATCATTTGGCCGTGTGTTTGTGTGTTTAGGTTTTTATGTGATTTGTAGAAATTCTTATTACAAACATGTTGATTGCAGGGTTTTTGATGATGGATGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTTTGGCACTCCATTGAATTTAACACCTATGTTGATAATCTAATTTTCTGATGATGTGGCCATGTAGATTGGTTAGTTAATTAGTTTTACAACCACTTTGGAAGTCCAATTGCATTGACTTGGTATATTGCCCTTTTTTGCAATTACAACAGCTTGACGTTTAAGGTTTTCTTAATGCTTACATCCTCATCTAGGATTTTAAAAAACATATTATCTAGACTAAATTTTGTATTGTAACCAAAAATGACAATGTATGGGAGGATGAGTTATCGAGTGCAGAGAGGTGGATATAATTATCCAACTATGATTTATATCAATATGCATTATGTTCTAGGATTTTCACATTTTTAATAGTGATGTGGATATACTGTATATGAAATGTGTTTGTCTACGATTTGTCACCACTGTGTAATGACTACTTTCCTATCCTAACTTCACCCATATCAAATTTTCTTTGGTGATGCATATGTTGTATGCTAACTTGGCTTTTGTAGGTGTGGAGCTTATCGAAGGGGAAGTTATTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAGCATGTCTTTTATGGTGGTGGCAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTTGGGTCATTGTCAAATCAAAGGTCTGTATTAATTATCTCTATCATTTTATTTTATCATGGAGGCTGTTTTTCTTTCAACATTAATATATCTACAGTTAAACAAGATTAAGTTTTCAATTTCCTATAATTTTGTTTGTCCTTTCTGGTTTCAAGAATATTTTCATTGTTCCATGCAATATATATTAGATTGTCTAATGATATAATTATGCAATGAAATGTTGAGGAATTTCAAGTTGCTATTAGTTTGGTGCACATGCACTAGGGTTATTTGTAATGGTGTCTTGATTTCTTAAAAACTAGGAATTAGTATTCTACTTCCAAGTTGATCATTGTTGGGTCTCGGTTGCTAAACAGCCACTCTCTTTATGGTTTCTTTAAAGAAACTGGACGTGGTTTTTTTAATATGTATATAGGTTTTTAATGCAGCATATATTATCTTTTTGGATTTGCTATATTGTCCAACTTATTGTCCTTTTGTATTCTTACTAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATATGAGGATGGAGCAATAAGAGTTTGGGATACACGAACCAATAATGTTATTCGTGTTTTCAGACATTCAAAAGGTAACAAGCCATTTAAATTTTATTACTTGAATAAGGTTAGTTTCTATGAAATTGTATTTTCTTTTCATTTATTGACCGTCTGACCCAGTATTTGAATAAATATTATTTCTTGCATAAATACCTCTACCAAGTTGTTTTTTATTTTCAAATTTAGCCTTAGCTGAGGCTTAAGGTACATCTTTCATTGTTTTGTTTCCTCTGCTTTGCAATTTTAATTGTTAGAGATTGGAGGATGTTACATTCAAATTAGAAAATATATATATGTTTTGAAGCTTGATACTCTTTTTTATCTCTTTCTTATGAACCTTATTTGAGCATTTTAAGTTCATTCATTTATATATAATTTTTTTTAAAATGTACATTCATTTATTTAATTTTCTTTCCCATAGCTTTTGCTTAATTCATGACCAGCATTTTTATTATATGATTTCAATGAAAATACACCAATGCTACATACTACCGTGCAGGTCCTGTAAACAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGGCCAATCTTACCACCTGCCCTCGCTAAATTTGAGAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTATGGAGTTTTCTTTCCTTAGTTCTCACGTTATGGATAATCAAATCACAGAACTTCAGGTGCTTTATTTTTTTTTCTATACCCCTTCCCTGTGGTCCTAGAATTCCTTTTTTCTTTCTTGCTTAATTATGTTGTAGCTTTTCTTGTTCTGGGATAGACACACAATATTTTGATATCCCATAATCCTCTATACGCTTAAAGCCTGTTCTAACATGTGGTTTTCTGTATTTCAGCAACAGGGTTCTGCTGCCACAGAAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGCTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGACGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGAGCGTTGCTATCACTTCTCTTATGTATTCTATTTGTTTTATCTATCTCCAGTTCTAGAAATTGTATAATCACGTCGAAACAAATCTGATGGAATTGTTAGGAAGTCATCGTTGATTAATTTAAATTCCAAAATCCCATTTCTGGGATAAGAGATCTGTACATGGCGAATACACTTCCTTAGTTTAGAAGATTATTTTTTGTTAATGTGGGGATTCTTTATTCTTCTTGTATGTTCTAGACTTGTTATGATTTTTGGTGCAATCTCTTTTTCA

mRNA sequence

CCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGCGCTAAACATCGTTTTGGTTGCCGCGCTGTTTTTCATCCACCGCACCGCCATAAATTATTCCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCAGAATGGTGCTACTGGTTGCTTCGTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTTCATACCGGCGCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCCCCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTCGCGTGCTCTCAGCTTCGCGATGCTGCAGCTACTGCTGGCTCCGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACAATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTAAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTTTTCTCTGAAGATGACTCCCTGTTAATTTCTGGTTCTGAAGACGGCTGCATTAGAGTTTGGTCCCTTATAACGGTTTTTGATGATGGATGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTATTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAGCATGTCTTTTATGGTGGTGGCAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTTGGGTCATTGTCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATATGAGGATGGAGCAATAAGAGTTTGGGATACACGAACCAATAATGTTATTCGTGTTTTCAGACATTCAAAAGGTCCTGTAAACAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGGCCAATCTTACCACCTGCCCTCGCTAAATTTGAGAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTATGGAGTTTTCTTTCCTTAGTTCTCACGTTATGGATAATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACAGAAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGCTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGACGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGAGCGTTGCTATCACTTCTCTTATGTATTCTATTTGTTTTATCTATCTCCAGTTCTAGAAATTGTATAATCACGTCGAAACAAATCTGATGGAATTGTTAGGAAGTCATCGTTGATTAATTTAAATTCCAAAATCCCATTTCTGGGATAAGAGATCTGTACATGGCGAATACACTTCCTTAGTTTAGAAGATTATTTTTTGTTAATGTGGGGATTCTTTATTCTTCTTGTATGTTCTAGACTTGTTATGATTTTTGGTGCAATCTCTTTTTCA

Coding sequence (CDS)

CCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGCGCTAAACATCGTTTTGGTTGCCGCGCTGTTTTTCATCCACCGCACCGCCATAAATTATTCCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCAGAATGGTGCTACTGGTTGCTTCGTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTTCATACCGGCGCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCCCCACATGGTCTTGTTTGTGTTGGTGAAAAGTTTCTCGCGTGCTCTCAGCTTCGCGATGCTGCAGCTACTGCTGGCTCCGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACAATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTAAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTTTTCTCTGAAGATGACTCCCTGTTAATTTCTGGTTCTGAAGACGGCTGCATTAGAGTTTGGTCCCTTATAACGGTTTTTGATGATGGATGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTATTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAGCATGTCTTTTATGGTGGTGGCAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTTGGGTCATTGTCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATATGAGGATGGAGCAATAAGAGTTTGGGATACACGAACCAATAATGTTATTCGTGTTTTCAGACATTCAAAAGGTCCTGTAAACAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGGCCAATCTTACCACCTGCCCTCGCTAAATTTGAGAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTATGGAGTTTTCTTTCCTTAGTTCTCACGTTATGGATAATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACAGAAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGCTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGACGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGA

Protein sequence

PHPIQLLPAAVSFGAKHRFGCRAVFHPPHRHKLFQTKLKTETLFSSSQLRMVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSVLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGVIIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRKMYDNLHQFCVNELLDGNQTKNIEGNST

Homology

[Close]

BLAST of MELO3C016764 vs. NCBI nr
Match: XP_011654116.2 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 978.8 bits (2529), Expect = 1.8e-281
Identity = 477/497 (95.98%), Postives = 483/497 (97.18%), Query Frame = 0


Query: 1   PHPIQLLPAAVSFGAKHRFGCRAVFHPPHRHKLFQTKLKTETLFSSSQLRMVLLVASSSI 60
           PHPIQLLPAAVSFGAK R GCRAVFHP HRHK  QTKLKTETL SSSQL MVLLVASSSI
Sbjct: 13  PHPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETLLSSSQLTMVLLVASSSI 72

Query: 61  DSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSVLYWSWCKPQ 120
           DSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGSVLYWSW KPQ
Sbjct: 73  DSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGSVLYWSWSKPQ 132

Query: 121 VEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSE 180
           VEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSE
Sbjct: 133 VEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSE 192

Query: 181 DDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAII 240
           DDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAII
Sbjct: 193 DDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAII 252

Query: 241 ISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCP 300
           ISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCP
Sbjct: 253 ISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCP 312

Query: 301 SSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKG 360
           SSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNNVIRVFRHSKG
Sbjct: 313 SSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG 372

Query: 361 PVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGVIIDPSGPPKE 420
           PVNNILLVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGVIIDPSGPPKE
Sbjct: 373 PVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVIIDPSGPPKE 432

Query: 421 SMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRKMYDNLHQFCV 480
           S  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRKMYDNLHQFCV
Sbjct: 433 STGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKMYDNLHQFCV 492

Query: 481 NELLDGNQTKNIEGNST 498
           NELLDGNQTKNIEGNST
Sbjct: 493 NELLDGNQTKNIEGNST 509

[Close]

BLAST of MELO3C016764 vs. NCBI nr
Match: XP_008452567.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo])

HSP 1 Score: 920.6 bits (2378), Expect = 5.7e-264
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 471 MYDNLHQFCVNELLDGNQTKNIEGNST 498
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]

BLAST of MELO3C016764 vs. NCBI nr
Match: KGN55205.1 (hypothetical protein Csa_012375 [Cucumis sativus])

HSP 1 Score: 894.8 bits (2311), Expect = 3.3e-256
Identity = 434/447 (97.09%), Postives = 440/447 (98.43%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 471 MYDNLHQFCVNELLDGNQTKNIEGNST 498
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]

BLAST of MELO3C016764 vs. NCBI nr
Match: KAA0064393.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa] >TYK20193.1 protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa])

HSP 1 Score: 866.3 bits (2237), Expect = 1.3e-247
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 471 M 472
           M
Sbjct: 421 M 421

[Close]

BLAST of MELO3C016764 vs. NCBI nr
Match: XP_038898957.1 (protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida])

HSP 1 Score: 847.0 bits (2187), Expect = 8.0e-242
Identity = 413/446 (92.60%), Postives = 426/446 (95.52%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVL+VASSSIDSGIGCWDLHTGAEQLRYKSCASP HGLVCVGE+FLACSQLRD AATAGS
Sbjct: 1   MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSWCKPQVEVKSFPAEPIMALASN+EGTYIVGGG SGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGCIRVW+L+TVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIID IALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPS+ DYGLHILGSLSNQSKSVT+LAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSTGDYGLHILGSLSNQSKSVTALAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLV+QQ LPKSQSTSQG LRKHR +LPPALAKFENSKDEDE TGV
Sbjct: 301 VIRVFRHSKGPVNNILLVRQQVLPKSQSTSQGFLRKHRSLLPPALAKFENSKDEDEDTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           II P+G PKESM F  LSSHVMDNQITELQQQGSAA  MELERLK+D GKS QMLQHWRK
Sbjct: 361 IIGPTGLPKESMGFPALSSHVMDNQITELQQQGSAANGMELERLKYDCGKSMQMLQHWRK 420

Query: 471 MYDNLHQFCVNELLDGNQTKNIEGNS 497
           MYDNLHQFCVNELLDG+QTKNI+GNS
Sbjct: 421 MYDNLHQFCVNELLDGDQTKNIQGNS 446

[Close]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 8.0e-144
Identity = 257/436 (58.94%), Postives = 322/436 (73.85%), Query Frame = 0


Query: 52  VLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSV 111
           + ++ASSSID GIG WDL TG EQL++K CASP HGL  VGEKFLA SQL  A  T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 112 LYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 171
            YWSW KPQ EVKS+P EPI ALA+NNEGTY+VGGG SGDIYLWEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 172 AVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 231
           +VTCLVFS DDSLL+SGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 232 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 291
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 292 TAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNV 351
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISG EDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 352 IRVFRHS----KGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEY 411
           +R   H+    KGPVNNI +V++  +  S  T Q S +    ++PP L K+E    ED  
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPV-EDTM 362

Query: 412 TGVI-IDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQ 471
            G++ +DP       +  SFLS+ ++D Q+ ELQQQGSAATEME+ERLK +Y +S QM +
Sbjct: 363 DGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNE 422

Query: 472 HWRKMYDNLHQFCVNE 483
            W+K Y+NL Q  + E
Sbjct: 423 QWQKNYENLLQVVMEE 431

[Close]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-41
Identity = 101/308 (32.79%), Postives = 160/308 (51.95%), Query Frame = 0


Query: 67  WDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSVLYWSWCKPQVEVKSF 126
           W+LH+GA  L Y+   + P GL  +  ++L  +QL     +A  +      K Q++ K  
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQR----KDQLQQKIM 82

Query: 127 PAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLI 186
              P+  L ++  G Y++  G +  I+LWEV +G LL     HY+ V+CL F+ D S  I
Sbjct: 83  CPGPVTCLTASPNGLYVL-AGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142

Query: 187 SGSEDGCIRVWSLITVFDDGWQR--EAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSS 246
           SG +D  + VWSL +V      R    +H++ H    H LP+TD+  G+GG  A + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202

Query: 247 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSD 306
           +D+T K+W +S G+LL +++F   I A+ +D  EH  + GG +G I+   L    P   +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262

Query: 307 YGLHILGSLSNQSK----SVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKG 366
              H         K     VT L+  + G++L+SG  D  +R+WD ++   IR     KG
Sbjct: 263 RSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVA-LKG 319

Query: 367 PVNNILLV 369
           PV N  ++
Sbjct: 323 PVTNAAIL 319

[Close]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-41
Identity = 100/312 (32.05%), Postives = 158/312 (50.64%), Query Frame = 0


Query: 67  WDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSVLYWSW---CKPQVEV 126
           W+LH+GA  L Y+   + P GL  +  ++L  +QL       G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82

Query: 127 KSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDS 186
           K     P+  L ++  G Y++  G S +IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTSPNGLYVL-AGISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142

Query: 187 LLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 246
             ISG +D  +  WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQADPSRTPAP--RHVWSRHTLPITDLHCGFGGPLARVATA 202

Query: 247 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL-------N 306
           S+D+T K+W +S G+LL +++F   I A+ +D  EH  + GG DG I+   L        
Sbjct: 203 SLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQRE 262

Query: 307 AKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFR 366
                  ++G    G        VT L+  + G++L+SG  D  +R+WD ++   +R   
Sbjct: 263 KSFQPEQEHGKVFRG----HRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVT 319

Query: 367 HSKGPVNNILLV 369
             KGPV N  ++
Sbjct: 323 -LKGPVTNACIM 319

[Close]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-41
Identity = 102/326 (31.29%), Postives = 168/326 (51.53%), Query Frame = 0


Query: 46  SSQLRMVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAA 105
           ++ L +VL   ++   +    W+  TG+  L Y+   +   GL  +G ++L   QL    
Sbjct: 2   AAPLELVLSADAAGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL---- 61

Query: 106 ATAGSVLYWS-WCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLK 165
                +  W    + Q++ K     P+  L+++  G Y+V  G +  IYLWEV +G LL 
Sbjct: 62  -GKNYINVWELQRRDQLQQKIVCPGPVNCLSASPNGLYLV-AGIAESIYLWEVSTGHLLA 121

Query: 166 KWHAHYRAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNL 225
             ++HY+ VTCL F++D S +ISG++D  + VW L +V      R  +  Y   ++ H+L
Sbjct: 122 ILNSHYQDVTCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVETSRGPEPRY--VWSRHSL 181

Query: 226 PVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGG 285
           P+TD+  G GG  A + +SS+D+T K+W +  G LL +++F   I ++A DP E+  + G
Sbjct: 182 PITDVQCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCG 241

Query: 286 GRDGKIYTAALNAKCPSSSDYGLHILGSL--SNQSKSVTSLAYCSSGNLLISGYEDGAIR 345
           G DG IY   L    P   +   H    +        VT L+    G++LISG  D  + 
Sbjct: 242 GSDGVIYQVDLYT-TPEQRERPFHPEQEMVFKGHRNQVTCLSVSLDGSMLISGSHDETVC 301

Query: 346 VWDTRTNNVIRVFRHSKGPVNNILLV 369
           VWD ++   +R   H +GPV N+ ++
Sbjct: 302 VWDIQSKQSLRSVPH-RGPVTNVFII 317

[Close]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot
Match: Q499N3 (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-39
Identity = 97/313 (30.99%), Postives = 157/313 (50.16%), Query Frame = 0


Query: 67  WDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSVLYWSW---CKPQVEV 126
           W+LH+GA  L Y+   + P GL  +  ++L        AA  G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYL-------LAAQQGKNYICAWELQRKDQLQQ 82

Query: 127 KSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDS 186
           K     P+  L +   G Y++  G +  IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTAPNGLYVL-AGIAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGS 142

Query: 187 LLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 246
             +S  +D  +  WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFVSAGKDCLVLAWSLCSVLQADPSRILAP--RHVWSQHTLPITDLHCGFGGPMARVATA 202

Query: 247 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSS 306
           S+D+T K+W++S G LL +++F   I ++ +D  EH  + GG DG I+   L ++ P   
Sbjct: 203 SLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR-PGPR 262

Query: 307 DYGLHILGSLSNQSK----SVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSK 366
           +       +     K     VT L+  + G++L+SG  D ++R+WD ++   +R     K
Sbjct: 263 EQSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRTV-PLK 322

Query: 367 GPVNNILLVQQQP 373
           GPV N  +    P
Sbjct: 323 GPVTNAAITLAPP 323

[Close]

BLAST of MELO3C016764 vs. ExPASy TrEMBL
Match: A0A1S3BU36 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.8e-264
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 471 MYDNLHQFCVNELLDGNQTKNIEGNST 498
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]

BLAST of MELO3C016764 vs. ExPASy TrEMBL
Match: A0A0A0KZT0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639920 PE=4 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 1.6e-256
Identity = 434/447 (97.09%), Postives = 440/447 (98.43%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 471 MYDNLHQFCVNELLDGNQTKNIEGNST 498
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]

BLAST of MELO3C016764 vs. ExPASy TrEMBL
Match: A0A5D3D9F7 (Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003270 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 6.2e-248
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 410
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 411 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 470
           IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 471 M 472
           M
Sbjct: 421 M 421

[Close]

BLAST of MELO3C016764 vs. ExPASy TrEMBL
Match: A0A6J1FMG7 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111446741 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 5.3e-231
Identity = 395/442 (89.37%), Postives = 415/442 (93.89%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVL+VASSS+DSGIGCWDLHTGAEQLRYKSCASP HGLVCVGE+FLACSQLRD AAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSW KPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCLVFSEDDSLLISGSEDGC+RVWSL+ VFDDGWQRE+KHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           +GYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAK PSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISG EDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQ--STSQGSLRKHRPILPPALAKFENSKDEDEYT 410
           +IRV +HSKGPVNN+L+V+QQ LP SQ   TSQGSLRKHR +LPPALAKF NSKD+DE T
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 411 GVIIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHW 470
           GVII  SGPP ESM FS +SSHVMDNQITELQQQGSAAT MELERLK DYGKS QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQW 420

Query: 471 RKMYDNLHQFCVNELLDGNQTK 491
           RK+YDNLHQ+CVNELLDG+QTK
Sbjct: 421 RKLYDNLHQYCVNELLDGDQTK 442

[Close]

BLAST of MELO3C016764 vs. ExPASy TrEMBL
Match: A0A6J1IYT8 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 3.2e-228
Identity = 391/442 (88.46%), Postives = 412/442 (93.21%), Query Frame = 0


Query: 51  MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 110
           MVL+VASSS+DSGIGCWDLHTGAEQL YKSCASP HGLVCVGE+FLACSQLRD AAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 111 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 170
           VLYWSW KPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 171 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 230
           RAVTCL FSEDDSLLISGSEDGC+RVWSL+ VFDDGWQRE+KHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 231 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 290
           +GYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 291 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 350
           YTAALNAK PSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISG EDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300

Query: 351 VIRVFRHSKGPVNNILLVQQQPLPKSQ--STSQGSLRKHRPILPPALAKFENSKDEDEYT 410
           +IRV +HSKGPVNN+L+VQ Q LP SQ   TSQGSLRKHR +LPPALAKF NSKD+DE T
Sbjct: 301 IIRVLKHSKGPVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360

Query: 411 GVIIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHW 470
           GVII  SGPP ESM FS +SSHVMD+QITELQQQGSAAT MELERLK +YGKS QM Q W
Sbjct: 361 GVIIGRSGPPMESMGFSPISSHVMDHQITELQQQGSAATGMELERLKREYGKSMQMQQQW 420

Query: 471 RKMYDNLHQFCVNELLDGNQTK 491
           RK+YDNLHQ+CVNELLDG+QTK
Sbjct: 421 RKLYDNLHQYCVNELLDGDQTK 442

[Close]

BLAST of MELO3C016764 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 511.9 bits (1317), Expect = 5.7e-145
Identity = 257/436 (58.94%), Postives = 322/436 (73.85%), Query Frame = 0


Query: 52  VLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGSV 111
           + ++ASSSID GIG WDL TG EQL++K CASP HGL  VGEKFLA SQL  A  T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 112 LYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 171
            YWSW KPQ EVKS+P EPI ALA+NNEGTY+VGGG SGDIYLWEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 172 AVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 231
           +VTCLVFS DDSLL+SGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 232 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 291
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 292 TAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNV 351
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISG EDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 352 IRVFRHS----KGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEY 411
           +R   H+    KGPVNNI +V++  +  S  T Q S +    ++PP L K+E    ED  
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPV-EDTM 362

Query: 412 TGVI-IDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQ 471
            G++ +DP       +  SFLS+ ++D Q+ ELQQQGSAATEME+ERLK +Y +S QM +
Sbjct: 363 DGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNE 422

Query: 472 HWRKMYDNLHQFCVNE 483
            W+K Y+NL Q  + E
Sbjct: 423 QWQKNYENLLQVVMEE 431

[Close]

BLAST of MELO3C016764 vs. TAIR 10
Match: AT1G18080.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 3.5e-17
Identity = 64/259 (24.71%), Postives = 112/259 (43.24%), Query Frame = 0


Query: 137 NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCIRV 196
           +++G + + G + G++ LW++ +G   +++  H + V  + FS D+  ++S S D  I++
Sbjct: 72  SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131

Query: 197 WSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSK 256
           W+ +         E K+       GH   V+ +          I+S+S D+T KVW+LS 
Sbjct: 132 WNTL--------GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 191

Query: 257 GKLLRNII-FPSIIDAIALDPGEHVFYGGGRDG-----------KIYT----AALNAKCP 316
            KL   +      +  +A+ P   +   GG+DG           K+Y+    + ++A C 
Sbjct: 192 CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 251

Query: 317 SSSDYGL-----HILGSLSNQSKSV------------------------------TSLAY 345
           S + Y L     H +     +SKS+                              TSL +
Sbjct: 252 SPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNW 311

[Close]

BLAST of MELO3C016764 vs. TAIR 10
Match: AT1G48630.1 (receptor for activated C kinase 1B )

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-16
Identity = 65/259 (25.10%), Postives = 115/259 (44.40%), Query Frame = 0


Query: 137 NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCIRV 196
           +++G + + G + G++ LW++ +G   +++  H + V  + FS D+  ++S S D  I++
Sbjct: 72  SSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131

Query: 197 WSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSK 256
           W+ +         E K+    +  GH   V+ +          I+S+S D+T KVW+L  
Sbjct: 132 WNTL--------GECKYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 191

Query: 257 GKLLRNIIFPS-IIDAIALDPGEHVFYGGGRDG-----------KIYT----AALNAKCP 316
            KL   +   S  ++ +A+ P   +   GG+DG           K+Y+    + +++ C 
Sbjct: 192 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 251

Query: 317 SSSDYGL-----HILGSLSNQSKSV------------------------TSLAYCSS--- 345
           S + Y L     + +     +SKSV                        T + YC+S   
Sbjct: 252 SPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNW 311

[Close]

BLAST of MELO3C016764 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 6.5e-16
Identity = 57/213 (26.76%), Postives = 96/213 (45.07%), Query Frame = 0


Query: 137 NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCIRV 196
           N +   IV G F   + +W+V +G+ LK   AH   VT + F+ D SL++S S DG  R+
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181

Query: 197 WSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSK 256
           W      D G      H  +      N PV+   V +      I+  ++D T ++W++S 
Sbjct: 182 W------DSG----TGHCVKTLIDDENPPVS--FVRFSPNGKFILVGTLDNTLRLWNISS 241

Query: 257 GKLLRNIIFP-----SIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHILG 316
            K L+           I  A ++  G+ +   G  D  ++   LN+K          +L 
Sbjct: 242 AKFLKTYTGHVNAQYCISSAFSVTNGKRI-VSGSEDNCVHMWELNSK---------KLLQ 301

Query: 317 SLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVW 345
            L   +++V ++A   + NL+ SG  D  +R+W
Sbjct: 302 KLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312

[Close]

BLAST of MELO3C016764 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 3.0e-13
Identity = 60/264 (22.73%), Postives = 111/264 (42.05%), Query Frame = 0


Query: 131 IMALASNNEGTYIVGGGFSGDIYLWEVLSG-RLLKKWHAHYRAVTCLVFSEDDSLLISGS 190
           I  LA +++  Y         + +W+  S    LK    H   V C+ F+   +L++SGS
Sbjct: 88  ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147

Query: 191 EDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTC 250
            D  IR+W + T                    H++P++ +     G  ++I+S+S D +C
Sbjct: 148 FDETIRIWEVKT-----------GKCVRMIKAHSMPISSVHFNRDG--SLIVSASHDGSC 207

Query: 251 KVWSLSKGKLLRNII---FPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYG 310
           K+W   +G  L+ +I    P++            F     +GK    A        S+Y 
Sbjct: 208 KIWDAKEGTCLKTLIDDKSPAV-----------SFAKFSPNGKFILVATLDSTLKLSNYA 267

Query: 311 ----LHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKGPV 370
               L +    +N+   +TS    ++G  ++SG ED  + +WD +  N++   +  +G  
Sbjct: 268 TGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL---QRLEGHT 324

Query: 371 NNILLVQQQPLPKSQSTSQGSLRK 387
           + ++ V   P+    S+S   L K
Sbjct: 328 DAVISVSCHPVQNEISSSGNHLDK 324

The following BLAST results are available for this feature:

BLAST of MELO3C016764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654116.2	1.8e-281	95.98	protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus]	[more]
XP_008452567.1	5.7e-264	100.00	PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo]	[more]
KGN55205.1	3.3e-256	97.09	hypothetical protein Csa_012375 [Cucumis sativus]	[more]
KAA0064393.1	1.3e-247	100.00	protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo var. makuwa] >TYK20193.1 prote...	[more]
XP_038898957.1	8.0e-242	92.60	protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida]	[more]

BLAST of MELO3C016764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	8.0e-144	58.94	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
Q9BV38	2.6e-41	32.79	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
Q3SZD4	3.4e-41	32.05	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]
A0A1L8HX76	4.4e-41	31.29	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q499N3	1.8e-39	30.99	WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1	[more]

BLAST of MELO3C016764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BU36	2.8e-264	100.00	protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4...	[more]
A0A0A0KZT0	1.6e-256	97.09	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A5D3D9F7	6.2e-248	100.00	Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1FMG7	5.3e-231	89.37	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC11144674...	[more]
A0A6J1IYT8	3.2e-228	88.46	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 ...	[more]

BLAST of MELO3C016764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	5.7e-145	58.94	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G18080.1	3.5e-17	24.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G48630.1	2.2e-16	25.10	receptor for activated C kinase 1B	[more]
AT3G49660.1	6.5e-16	26.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	3.0e-13	22.73	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 332..346 score: 37.37 coord: 185..199 score: 40.52 coord: 240..254 score: 36.27
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 212..253 e-value: 0.0046 score: 26.2 coord: 119..156 e-value: 1.4 score: 16.1 coord: 306..345 e-value: 3.1E-6 score: 36.7 coord: 256..294 e-value: 350.0 score: 1.0 coord: 159..198 e-value: 4.7E-10 score: 49.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 161..198 e-value: 5.0E-7 score: 30.3 coord: 310..345 e-value: 6.0E-6 score: 26.9 coord: 217..253 e-value: 0.0035 score: 18.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 313..354 score: 15.153581
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 166..199 score: 13.983944
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 219..262 score: 9.606159
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 264..372 e-value: 1.3E-14 score: 56.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 28..263 e-value: 3.4E-33 score: 116.8
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 52..483
None	No IPR available	PANTHER	PTHR18763:SF0	WD REPEAT-CONTAINING PROTEIN 18	coord: 52..483
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 166..199 score: 11.5765
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 313..348 score: 11.497408
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 332..346
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 55..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016764.1	MELO3C016764.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding