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MELO3C016755 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGCTCAGCATGAACCCAGCCACAGCCACAGGCCAGGGAATGCGGATCGAAGAGAAATTCTATAGAATCTCCATTCCATGAGATTGATGATAATGTGAGCGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAAAGAATTGGGAGAAAAGCCATGCTCCGAAATCGCACACTACCATTTCATTCTCGATAGTTGCAATTTCAAGCTCCTTGTCTCAATTGATCAAGGGCATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAGTAAGCAACCATTGTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTAACTGAATTTGAACTTCCTGGTCAAATAGAAATTATGCAACCATATTCTTAGTGAATTTTTAACTTGCGTTTGTTCAAATGAAAACGTGTCACTCGAAGATGAACGGAACTATATCATTTGAGATCGATGTTACGGAACTCCTATGGAATGTTCATCAATTTCCATACCATAAGGACAAGAATTACGAATACCGTCAATTAATCTCTTCGAAGTTCATTGGTTTTATTCAATTTTTTTTAATTTGATTAATAATTGGGATACCCAAAGACTTTGAATCTAAAAAATTGATGAAAAAAAAGGCTCTTGCAACAGTAGATACTCAACCTATGACCCTTAGCCCATGGATACTGCTTGCAGCTCTCGCAATATGATCTTTATGAAAAAGGGTTTCAAAATATGAATGATTAAGAGGACTTCTATATCTTCTTAAAAAGATATGTAGTCTAAACCGGTAGTCAAGTTATTATACCTTCTCTCTCCTACTTATCTGATTAGGTGTTCGTAGCATGTATGCTGTTATCTCTTAGTAAGAGTTTCAAGTTGCTATTATTTCAGCATATCTCCTCAGACAAAATTATAACGTTTTATAGTTGTTTTTCTTCCCTTGGATGCAATTATAATGGTGGATCACAAATCTGAAAGAGAATATTTTGTCTTGGATTCATTAGCATGATGAAGTAGAGTTTAATCTCCATTCGTTAATCATCTTTAATCATACACCTGCAGATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTATATCTCTCTCCGTACATATTTGTACATGTCATGTGTTTTGAGCTTATTTTTAGAATTTACATTTATGTAAAATAAAACAACTAATTAGTACTCTAGCCTGTAGCCTCTTTTTCTATTTCCTTGGATGAAAGAAAGCTCGTCTTGAATCTGGTAAAGAAACTAAATGTTCACAAGCAAGTATTTTATTACTTCTGATGAGGCATGCTGATTATTGCTGTTGTTGAGATCAACTTCAATCAGTTCATGATCTATACCGTGGATTTTTTTACAAGCTTAATTTGTAATGTTAAAATATTTGTCTATACTGTTCATCAACTTGTAAAGATATAAATTGTTGTCGAACAGAACACTTCTAAGAAAGGAAAACTTTCTTTTCCTTCTACTTGTTATGTACATTATCTGTGGATTTTTTTTCTTTCTAAAAGACATGCTTCCTGTGATATAAATGAAGAATGCATAATGGCGAGAAGGCATTGATAAGTGGCAACGGTTTGAATCTTTGTTGAAACATTGTATTTTCACTTGATTGTATATATGTGATACTGCCTAAAGGGTTATACCTTGACTTGAAGAACCTGCTTATGGGCAGTTCCATGTTCGTTTTTAAACTATTTTCTTTCGTATTATACTGGGCATTGGATATACGCTGTATTTGTTAACTGAAATGACCATGGCAATTTTTTATTGGTGGTGTTGTGGTCGGCAGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAACACCTGTAAGATCTGTTAATCATACTCTTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAGATTGACCAACCACGCTTGTGTGGTTCTCTTGTGTTTAATGACTTGAAATTAGCAAATCAAGATGGATATGGGGTGAATGTAGACTCTTGCTTAGTAAAATTCAATTTTGTAAATTCTAAC ATAGCTCAGCATGAACCCAGCCACAGCCACAGGCCAGGGAATGCGGATCGAAGAGAAATTCTATAGAATCTCCATTCCATGAGATTGATGATAATGTGAGCGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAAAGAATTGGGAGAAAAGCCATGCTCCGAAATCGCACACTACCATTTCATTCTCGATAGTTGCAATTTCAAGCTCCTTGTCTCAATTGATCAAGGGCATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAACACCTGTAAGATCTGTTAATCATACTCTTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAGATTGACCAACCACGCTTGTGTGGTTCTCTTGTGTTTAATGACTTGAAATTAGCAAATCAAGATGGATATGGGGTGAATGTAGACTCTTGCTTAGTAAAATTCAATTTTGTAAATTCTAAC ATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAA MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR Homology
BLAST of MELO3C016755 vs. NCBI nr
Match: XP_008452556.1 (PREDICTED: protein DCL, chloroplastic [Cucumis melo]) HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C016755 vs. NCBI nr
Match: KAA0064386.1 (protein DCL [Cucumis melo var. makuwa] >TYK20201.1 protein DCL [Cucumis melo var. makuwa]) HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C016755 vs. NCBI nr
Match: XP_004141259.1 (protein DCL homolog, chloroplastic [Cucumis sativus] >KGN55194.1 hypothetical protein Csa_011993 [Cucumis sativus]) HSP 1 Score: 437.6 bits (1124), Expect = 6.6e-119 Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of MELO3C016755 vs. NCBI nr
Match: XP_038897137.1 (protein DCL homolog, chloroplastic [Benincasa hispida]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 200/225 (88.89%), Postives = 210/225 (93.33%), Query Frame = 0
BLAST of MELO3C016755 vs. NCBI nr
Match: XP_022133006.1 (protein DCL homolog, chloroplastic [Momordica charantia]) HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106 Identity = 192/224 (85.71%), Postives = 203/224 (90.62%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68 Identity = 136/225 (60.44%), Postives = 168/225 (74.67%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 8.0e-67 Identity = 125/180 (69.44%), Postives = 147/180 (81.67%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.7e-21 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.3e-04 Identity = 37/118 (31.36%), Postives = 58/118 (49.15%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy Swiss-Prot
Match: P85936 (Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.4e-04 Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy TrEMBL
Match: A0A5A7VDC9 (Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003370 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.3e-127 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy TrEMBL
Match: A0A1S3BVA4 (protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493543 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.3e-127 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy TrEMBL
Match: A0A0A0L2D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639820 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.2e-119 Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy TrEMBL
Match: A0A6J1BTU2 (protein DCL homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005680 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107 Identity = 192/224 (85.71%), Postives = 203/224 (90.62%), Query Frame = 0
BLAST of MELO3C016755 vs. ExPASy TrEMBL
Match: A0A6J1FFU9 (protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443664 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101 Identity = 182/225 (80.89%), Postives = 202/225 (89.78%), Query Frame = 0
BLAST of MELO3C016755 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 261.2 bits (666), Expect = 7.9e-70 Identity = 136/225 (60.44%), Postives = 168/225 (74.67%), Query Frame = 0
BLAST of MELO3C016755 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) ) HSP 1 Score: 258.1 bits (658), Expect = 6.7e-69 Identity = 135/225 (60.00%), Postives = 167/225 (74.22%), Query Frame = 0
BLAST of MELO3C016755 vs. TAIR 10
Match: AT3G46630.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 134.8 bits (338), Expect = 8.6e-32 Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0
BLAST of MELO3C016755 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B ) HSP 1 Score: 102.1 bits (253), Expect = 6.1e-22 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of MELO3C016755 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05 Identity = 37/118 (31.36%), Postives = 58/118 (49.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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