MELO3C016754 (gene) Melon (DHL92) v4

Overview


Name	MELO3C016754
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Cold regulated protein 27
Location	chr07: 2274831 .. 2277146 (+)
RNA-Seq Expression	MELO3C016754
Synteny	MELO3C016754

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCAATATCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTTCATCTCTCTGTCGCCATTGCAAATCTGGAGATAATCCTTCTTCCTCTTCCCCATTCATGGAGTTGTTGCCTCGAAATTTGGACAATCTCAACTCCAGAGAAGCTCGTTCCGACTCCCTCGTTTCTGAATTCGTCAAGGATGGGTCTACCGAGTTTTGCCGCCCGATTGAGTCTTCTAGCCGGGCACTTACCCTACTTACTTCTTTCTCATATTTTTCAATTATCGTTGTTTCTGATGTTTTTTGTTGTTCCGATTAGGTTTTGCTTCTGTGATGTTTCGTATCTTCAATTTCATGCTATGTCACCGTTACTTCACTGTTTCTCTCTACTTTCGTGTTAAAAGTGAATATATATATATACACATATATGTATATATACGAATTAAACAATTGAAAGAAAGAGCAAGTGGAAGAATACAGTTCTTCTTTCGCACTAACCTCTCATGACCGGAGGTTTTTGTTTTGTATTTTGTTCGGCTCTGTTTGGATCGATCTTGCCCTTTGTCGATGGAATTACTAGGGCGTGTAAGGGGTTTGAAACTGTGGAGAATAATTCTGGAAATTCAGCATGAGTTTTGATTGTTCAACATTATGATTTGTGCTTAAGATCACTAATAGTAGCGTTTTTCCGTTATTTGTTAAAAAAGACCATGTACTTTCCGCCGGAATTGCTGATAATGCGGTTTCGGTTTTAGGGTACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTTCTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCCGTTGGTTCCTGCCCCAGCAAGGATAATTCTTCGCGGACAAAATTGCTCAGCAAAAGCCAGTCCGCCTCTCACGTCCATTCACATTTTGGCCAGGTTCAATACCAATTGCTTTTTCTTGACGAGTTTTAACTCTTTTCTGATCATGGGCTTGTGAATTCTCAATTTGCTCATTTCTTGCTTTTGTTTATTCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGAATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTCAAAGCTGCTCGTAAAAACAAAAATGTCGCTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGGAACTCGTTGTCATTAGAAGCAGCTAATAATTCAGGACCTATACGTGCTTCCAACTCTGATTTGTCCCAGCAATATATCAGCAGTAATAAAGGTAAATCTTTTGGCTTCAGACCTTATATATCATCCATATTTTATTGACAGATTTGTGCCTCCCCTTGGTTGTAATTGTAATTTAGTTTATCAAGTTTAAGTTCGCTAGTTAGTGATTCTACATTGCAAGATGTTTGCTCAGTATCTGGTATTTACTACCAGAAACTTCCGTTTCAAAACAAATTGATACAATTTAAGTGAAACTGAACTCTTTATTGCAATCAGCTTTGTCCAAATCCCAATTATGATTTTTATTGCAAATTGTAAGGCAATCGTAATTTCGCTAATGTGAGACTAACTTATTTTAGATGATAATAACTGTTATAACATTAAGCTCTACAAATGATTGCCATACTGCAGAAGTTTCGGATCAGAACTTTGTTGATGAAGTTGTAGAAGTTGAAAAAGGAAGCAGGGATTGCAATGCCTAAAGGGTCAACACATCAGAAACCAATGCTTTGATCAATGACCAGGTAATTCAAGTCATATCAACTTAACTTCCATCTCTTCCTCCAAAAAGATGATCACTGATTTTCTTTTAGGTTGTTCCTTAAATTCCATGAAAAGGAGATGGTGTTTAACAAGAATTATCTTACAGCCAGAAGATAGCTAGATCCCAGATTGTCGCCAAGATGTGCCAAAAGACTTATCGACTACTTTTCTAACTCGGGAAGGGCTATAGATGAGAGATTGTTGGTGAAGTCAATAATGCTCATCTTGATGTTCTTGGGTTTGTCTGGTAATGTAAGTTCTACTACCTAATACCTTCGGTTGCCTGAAGTTACGTATAGTAATTAGTACATCAGCAATTATGATTTTGACTGGGTAGATGTCTATGGTATTGCCATTCATCACTTGTGTGTGTGTATATATATACATATTTCTTTTGGTTCATCAAGATTATGAAACATCTATTCTAGTCTTTCGAAATGAAATAGTAAGAAAATTTCAATTTTATTCCTCAACTGTTCATGAGTTTATTTATTGGAACAAGATTTTTA

mRNA sequence

CTCTTCAATATCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTTCATCTCTCTGTCGCCATTGCAAATCTGGAGATAATCCTTCTTCCTCTTCCCCATTCATGGAGTTGTTGCCTCGAAATTTGGACAATCTCAACTCCAGAGAAGCTCGTTCCGACTCCCTCGTTTCTGAATTCGTCAAGGATGGGTCTACCGAGTTTTGCCGCCCGATTGAGTCTTCTAGCCGGGCACTTACCCTACTTACTTCTTTCTCATATTTTTCAATTATCGTTGTTTCTGATGTTTTTTGTTGTTCCGATTAGGTTTTGCTTCTGTGATGTTTCGTATCTTCAATTTCATGCTATGTCACCGTTACTTCACTGTTTCTCTCTACTTTCGTGTTAAAAGTGAATATATATATATACACATATATGTATATATACGAATTAAACAATTGAAAGAAAGAGCAAGTGGAAGAATACAGTTCTTCTTTCGCACTAACCTCTCATGACCGGAGGTTTTTGTTTTGTATTTTGTTCGGCTCTGTTTGGATCGATCTTGCCCTTTGTCGATGGAATTACTAGGGCGTGTAAGGGGTTTGAAACTGTGGAGAATAATTCTGGAAATTCAGCATGAGTTTTGATTGTTCAACATTATGATTTGTGCTTAAGATCACTAATAGTAGCGTTTTTCCGTTATTTGTTAAAAAAGACCATGTACTTTCCGCCGGAATTGCTGATAATGCGGTTTCGGTTTTAGGGTACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTTCTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCCGTTGGTTCCTGCCCCAGCAAGGATAATTCTTCGCGGACAAAATTGCTCAGCAAAAGCCAGTCCGCCTCTCACGTCCATTCACATTTTGGCCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGAATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTCAAAGCTGCTCGTAAAAACAAAAATGTCGCTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGGAACTCGTTGTCATTAGAAGCAGCTAATAATTCAGGACCTATACGTGCTTCCAACTCTGATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTTTCGGATCAGAACTTTGTTGATGAAGTTGTAGAAGTTGAAAAAGGAAGCAGGGATTGCAATGCCTAAAGGGTCAACACATCAGAAACCAATGCTTTGATCAATGACCAGGTTGTTCCTTAAATTCCATGAAAAGGAGATGGTGTTTAACAAGAATTATCTTACAGCCAGAAGATAGCTAGATCCCAGATTGTCGCCAAGATGTGCCAAAAGACTTATCGACTACTTTTCTAACTCGGGAAGGGCTATAGATGAGAGATTGTTGGTGAAGTCAATAATGCTCATCTTGATGTTCTTGGGTTTGTCTGGTAATGTAAGTTCTACTACCTAATACCTTCGGTTGCCTGAAGTTACGTATAGTAATTAGTACATCAGCAATTATGATTTTGACTGGGTAGATGTCTATGGTATTGCCATTCATCACTTGTGTGTGTGTATATATATACATATTTCTTTTGGTTCATCAAGATTATGAAACATCTATTCTAGTCTTTCGAAATGAAATAGTAAGAAAATTTCAATTTTATTCCTCAACTGTTCATGAGTTTATTTATTGGAACAAGATTTTTA

Coding sequence (CDS)

ATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTTCTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCCGTTGGTTCCTGCCCCAGCAAGGATAATTCTTCGCGGACAAAATTGCTCAGCAAAAGCCAGTCCGCCTCTCACGTCCATTCACATTTTGGCCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGAATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTCAAAGCTGCTCGTAAAAACAAAAATGTCGCTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGGAACTCGTTGTCATTAGAAGCAGCTAATAATTCAGGACCTATACGTGCTTCCAACTCTGATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTTTCGGATCAGAACTTTGTTGATGAAGTTGTAGAAGTTGAAAAAGGAAGCAGGGATTGCAATGCCTAA

Protein sequence

MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQAIGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA

Homology

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BLAST of MELO3C016754 vs. NCBI nr
Match: KAA0064385.1 (uncharacterized protein E6C27_scaffold255G00860 [Cucumis melo var. makuwa] >TYK20202.1 uncharacterized protein E5676_scaffold134G003390 [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 7.7e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV
Sbjct: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA
Sbjct: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA
Sbjct: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 179

[Close]

BLAST of MELO3C016754 vs. NCBI nr
Match: XP_008452552.1 (PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo] >XP_008452553.1 PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo] >XP_008452555.1 PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 7.7e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA
Sbjct: 106 HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA
Sbjct: 166 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 224

[Close]

BLAST of MELO3C016754 vs. NCBI nr
Match: XP_011654107.2 (cold-regulated protein 27 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88
Identity = 169/179 (94.41%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQSASH 
Sbjct: 100 MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHG 159

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKNV CKSQA
Sbjct: 160 HSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQA 219

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSL AANNSGPIRAS+SDLSQQYIS+NKEVSDQNFVDEV+EVEKGS DCNA
Sbjct: 220 IGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNA 278

[Close]

BLAST of MELO3C016754 vs. NCBI nr
Match: KAE8649861.1 (hypothetical protein Csa_012756 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88
Identity = 169/179 (94.41%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQSASH 
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHG 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKNV CKSQA
Sbjct: 106 HSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQA 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSL AANNSGPIRAS+SDLSQQYIS+NKEVSDQNFVDEV+EVEKGS DCNA
Sbjct: 166 IGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNA 224

[Close]

BLAST of MELO3C016754 vs. NCBI nr
Match: XP_038896198.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 159/179 (88.83%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDS HSVGSCPSK+NSSR KLL +SQSASHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSVHSVGSCPSKENSSRAKLLGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHF+AARKNKNVACKSQ+
Sbjct: 106 HSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQS 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSL   AANNSG +RAS+SDLSQQ+ISSNKEVSDQNFVDE  E EKGS DCNA
Sbjct: 166 IGSRGRNSLPFGAANNSGSMRASDSDLSQQFISSNKEVSDQNFVDE--EAEKGSSDCNA 222

[Close]

BLAST of MELO3C016754 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.6e-12
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 7   SDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQ 66
           ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       Q
Sbjct: 46  TEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ-----EQ 105

Query: 67  FKVLRRGSWKNINFEPTESRSNFL---NEYQALSHNPWIHHFKAARKNKNVAC---KSQA 126
           FKVL  G W+ IN +  E R N     N ++ L  +PWI H+K   K +       ++Q 
Sbjct: 106 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFL-RSPWIKHYKPLVKTQIPVTDEPENQV 165

Query: 127 I-GSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGS 175
           +  S G+  +    + +S    +S+S    Q      EVSDQNFV+E ++ E GS
Sbjct: 166 VSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 211

[Close]

BLAST of MELO3C016754 vs. ExPASy TrEMBL
Match: A0A1S3BU49 (uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA
Sbjct: 106 HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA
Sbjct: 166 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 224

[Close]

BLAST of MELO3C016754 vs. ExPASy TrEMBL
Match: A0A5D3D9F8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003390 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV
Sbjct: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA
Sbjct: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA
Sbjct: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 179

[Close]

BLAST of MELO3C016754 vs. ExPASy TrEMBL
Match: A0A0A0L0A2 (Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 169/179 (94.41%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQSASH 
Sbjct: 122 MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHG 181

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKNV CKSQA
Sbjct: 182 HSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQA 241

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGSRGRNSLSL AANNSGPIRAS+SDLSQQYIS+NKEVSDQNFVDEV+EVEKGS DCNA
Sbjct: 242 IGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNA 300

[Close]

BLAST of MELO3C016754 vs. ExPASy TrEMBL
Match: A0A6J1IM11 (uncharacterized protein LOC111476815 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.5e-74
Identity = 147/179 (82.12%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQSASHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           H+HFGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHF+A RKNKNVACKSQA
Sbjct: 106 HAHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGS GRN   L AANNS P+RA  SDLS QYISSN+EVSDQNFVDE  EV  GS DCNA
Sbjct: 166 IGSGGRNLFPLGAANNSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNA 224

[Close]

BLAST of MELO3C016754 vs. ExPASy TrEMBL
Match: A0A6J1IFL9 (uncharacterized protein LOC111476815 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.5e-74
Identity = 147/179 (82.12%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHV 60
           MTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQSASHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQA 120
           H+HFGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHF+A RKNKNVACKSQA
Sbjct: 106 HAHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCNA 180
           IGS GRN   L AANNS P+RA  SDLS QYISSN+EVSDQNFVDE  EV  GS DCNA
Sbjct: 166 IGSGGRNLFPLGAANNSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNA 224

[Close]

BLAST of MELO3C016754 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 7   SDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQ 66
           ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       Q
Sbjct: 46  TEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ-----EQ 105

Query: 67  FKVLRRGSWKNINFEPTESRSNFL---NEYQALSHNPWIHHFKAARKNKNVAC---KSQA 126
           FKVL  G W+ IN +  E R N     N ++ L  +PWI H+K   K +       ++Q 
Sbjct: 106 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFL-RSPWIKHYKPLVKTQIPVTDEPENQV 165

Query: 127 IGSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGS 175
           + S         + + S   + S+       IS  +EVSDQNFV+E ++ E GS
Sbjct: 166 VSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEEVSDQNFVNEGIKGENGS 210

[Close]

BLAST of MELO3C016754 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 7   SDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQ 66
           ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       Q
Sbjct: 46  TEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ-----EQ 105

Query: 67  FKVLRRGSWKNINFEPTESRSNFL---NEYQALSHNPWIHHFKAARKNKNVAC---KSQA 126
           FKVL  G W+ IN +  E R N     N ++ L  +PWI H+K   K +       ++Q 
Sbjct: 106 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFL-RSPWIKHYKPLVKTQIPVTDEPENQV 165

Query: 127 I-GSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGS 175
           +  S G+  +    + +S    +S+S    Q      EVSDQNFV+E ++ E GS
Sbjct: 166 VSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 211

[Close]

BLAST of MELO3C016754 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 7   SDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQ 66
           ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       Q
Sbjct: 46  TEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ-----EQ 105

Query: 67  FKVLRRGSWKNINFEPTESRSNFL---NEYQALSHNPWIHHFKAARKNKNVAC---KSQA 126
           FKVL  G W+ IN +  E R N     N ++ L  +PWI H+K   K +       ++Q 
Sbjct: 106 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFL-RSPWIKHYKPLVKTQIPVTDEPENQV 165

Query: 127 I-GSRGRNSLSLEAANNSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGS 175
           +  S G+  +    + +S    +S+S    Q      EVSDQNFV+E ++ E GS
Sbjct: 166 VSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 211

The following BLAST results are available for this feature:

BLAST of MELO3C016754 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064385.1	7.7e-94	100.00	uncharacterized protein E6C27_scaffold255G00860 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008452552.1	7.7e-94	100.00	PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo] >XP_008452553.1 P...	[more]
XP_011654107.2	3.7e-88	94.41	cold-regulated protein 27 [Cucumis sativus]	[more]
KAE8649861.1	3.7e-88	94.41	hypothetical protein Csa_012756 [Cucumis sativus]	[more]
XP_038896198.1	2.6e-81	88.83	cold-regulated protein 27 isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C016754 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	7.6e-12	33.71	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]

BLAST of MELO3C016754 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BU49	3.7e-94	100.00	uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=...	[more]
A0A5D3D9F8	3.7e-94	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L0A2	1.8e-88	94.41	Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639...	[more]
A0A6J1IM11	9.5e-74	82.12	uncharacterized protein LOC111476815 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IFL9	9.5e-74	82.12	uncharacterized protein LOC111476815 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C016754 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	1.4e-13	33.33	cold regulated gene 27	[more]
AT5G42900.1	5.4e-13	33.71	cold regulated gene 27	[more]
AT5G42900.2	5.4e-13	33.71	cold regulated gene 27	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57
None	No IPR available	PANTHER	PTHR33676:SF3	COLD REGULATED PROTEIN 27	coord: 3..178
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 3..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016754.1	MELO3C016754.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold