MELO3C016704.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016704.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RING-H2 finger protein ATL39-like
Location	chr07: 2960413 .. 2961029 (+)
RNA-Seq Expression	MELO3C016704.jh1
Synteny	MELO3C016704.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCAACAAAATCCTCATCCTCCATAGCCAACAAAGAAACTTAAAAACCTTCACAACAATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAATGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCCCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAATCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAGATTAATTTCTTCTTCTTCCTCTCATTTCTTTTCTCTACGTTGATCAGAGAATTGTACATATAATTATAGCTTTTAATT

mRNA sequence

TCATCAACAAAATCCTCATCCTCCATAGCCAACAAAGAAACTTAAAAACCTTCACAACAATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAATGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCCCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAATCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAGATTAATTTCTTCTTCTTCCTCTCATTTCTTTTCTCTACGTTGATCAGAGAATTGTACATATAATTATAGCTTTTAATT

Coding sequence (CDS)

ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAATGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCCCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAATCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG

Protein sequence

MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA

Homology

[Close]

BLAST of MELO3C016704.jh1 vs. NCBI nr
Match: XP_008453063.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo] >TYK20253.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (821), Expect = 2.10e-110
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL
Sbjct: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           AGENCQALPEC+HFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 121 AGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 159

[Close]

BLAST of MELO3C016704.jh1 vs. NCBI nr
Match: KAA0064334.1 (RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (821), Expect = 8.19e-110
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 40  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 99

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL
Sbjct: 100 FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 159

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           AGENCQALPEC+HFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 160 AGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 198

[Close]

BLAST of MELO3C016704.jh1 vs. NCBI nr
Match: XP_031740449.1 (RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 310 bits (795), Expect = 1.94e-106
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRR+GGG EDVEAAMAEERR+KRAEKLPLPPTV+FGSEKMVRRRSEEECAICLEEFL
Sbjct: 61  FLDVRRNGGGGEDVEAAMAEERRLKRAEKLPLPPTVRFGSEKMVRRRSEEECAICLEEFL 120

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
            GENCQALPECNHFFHSECI+VWFSKKFTCPICRNCVAA
Sbjct: 121 IGENCQALPECNHFFHSECIDVWFSKKFTCPICRNCVAA 159

[Close]

BLAST of MELO3C016704.jh1 vs. NCBI nr
Match: XP_022976597.1 (RING-H2 finger protein ATL39-like [Cucurbita maxima])

HSP 1 Score: 256 bits (653), Expect = 7.29e-85
Identity = 129/160 (80.62%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVIVHYTVTLDLRTSIIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEF 120
           WFL  RR G    DVEA M EERR++RAEK+P    V+FGSE+MVRRRSEEECAICLEEF
Sbjct: 61  WFLSGRRGG----DVEAGMGEERRVRRAEKMPA--AVRFGSERMVRRRSEEECAICLEEF 120

Query: 121 LAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           +AGENCQALPECNHFFHS+CI+VWFSKKFTCPICR+C+AA
Sbjct: 121 MAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRHCIAA 154

[Close]

BLAST of MELO3C016704.jh1 vs. NCBI nr
Match: XP_022936829.1 (RING-H2 finger protein ATL39-like [Cucurbita moschata])

HSP 1 Score: 254 bits (649), Expect = 2.97e-84
Identity = 128/160 (80.00%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVVVHYTVTLDLRTSMIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEF 120
           WFL  RR G    DVEA M EERR++RAEK+P    V+FGSE+MVRRRSEEECAICLEEF
Sbjct: 61  WFLSGRRGG----DVEAGMGEERRVRRAEKMPA--AVRFGSERMVRRRSEEECAICLEEF 120

Query: 121 LAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           +AGENCQALPECNHFFHS+CI+VWFSKKFTCPICR+C+AA
Sbjct: 121 MAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRHCIAA 154

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.9e-12
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 74  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAIC 133
           +  A+    R   +E +P   + +  S K +++++                  +EEC IC
Sbjct: 79  IRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVIC 138

Query: 134 LEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           L +F++GE  + LP+CNH FH  CI+ W  +  TCP CRNC+
Sbjct: 139 LSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.9e-12
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 111 ECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EC+ICL E + G+  + LP+CNH FH ECI++WF    TCPICRN V
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 110 EECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EEC ICL +F+AGE  + LP+CNH FH  CI+ W ++  TCP CR+C+
Sbjct: 128 EECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 111 ECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 160
           ECA+CL + + G+  + LP CNH FH +CI++WF    TCP+CRN V +
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGS 167

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-11
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 110 EECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EEC ICL +F++GE  + LP+CNH FH  CI+ W     TCP CR+C+
Sbjct: 133 EECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL 180

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D9M0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003920 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.02e-110
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL
Sbjct: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           AGENCQALPEC+HFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 121 AGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 159

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BVC7 (RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.02e-110
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL
Sbjct: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           AGENCQALPEC+HFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 121 AGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 159

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VAT0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00330 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 3.96e-110
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 40  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 99

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL
Sbjct: 100 FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 159

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           AGENCQALPEC+HFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 160 AGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 198

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L062 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 9.40e-107
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFL 120
           FLDVRR+GGG EDVEAAMAEERR+KRAEKLPLPPTV+FGSEKMVRRRSEEECAICLEEFL
Sbjct: 61  FLDVRRNGGGGEDVEAAMAEERRLKRAEKLPLPPTVRFGSEKMVRRRSEEECAICLEEFL 120

Query: 121 AGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
            GENCQALPECNHFFHSECI+VWFSKKFTCPICRNCVAA
Sbjct: 121 IGENCQALPECNHFFHSECIDVWFSKKFTCPICRNCVAA 159

[Close]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IG67 (RING-H2 finger protein ATL39-like OS=Cucurbita maxima OX=3661 GN=LOC111476945 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 3.53e-85
Identity = 129/160 (80.62%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVIVHYTVTLDLRTSIIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEF 120
           WFL  RR G    DVEA M EERR++RAEK+P    V+FGSE+MVRRRSEEECAICLEEF
Sbjct: 61  WFLSGRRGG----DVEAGMGEERRVRRAEKMPA--AVRFGSERMVRRRSEEECAICLEEF 120

Query: 121 LAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 159
           +AGENCQALPECNHFFHS+CI+VWFSKKFTCPICR+C+AA
Sbjct: 121 MAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRHCIAA 154

[Close]

BLAST of MELO3C016704.jh1 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 74  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAIC 133
           +  A+    R   +E +P   + +  S K +++++                  +EEC IC
Sbjct: 79  IRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVIC 138

Query: 134 LEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           L +F++GE  + LP+CNH FH  CI+ W  +  TCP CRNC+
Sbjct: 139 LSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180

[Close]

BLAST of MELO3C016704.jh1 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 111 ECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EC+ICL E + G+  + LP+CNH FH ECI++WF    TCPICRN V
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

[Close]

BLAST of MELO3C016704.jh1 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-13
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 110 EECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EEC ICL +F+AGE  + LP+CNH FH  CI+ W ++  TCP CR+C+
Sbjct: 128 EECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175

[Close]

BLAST of MELO3C016704.jh1 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 111 ECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCVAA 160
           ECA+CL + + G+  + LP CNH FH +CI++WF    TCP+CRN V +
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGS 167

[Close]

BLAST of MELO3C016704.jh1 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-12
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 110 EECAICLEEFLAGENCQALPECNHFFHSECIEVWFSKKFTCPICRNCV 158
           EEC ICL +F++GE  + LP+CNH FH  CI+ W     TCP CR+C+
Sbjct: 133 EECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL 180

The following BLAST results are available for this feature:

BLAST of MELO3C016704.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453063.1	2.10e-110	99.37	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo] >TYK20253.1 RING-H2 ...	[more]
KAA0064334.1	8.19e-110	99.37	RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]	[more]
XP_031740449.1	1.94e-106	94.97	RING-H2 finger protein ATL39-like [Cucumis sativus]	[more]
XP_022976597.1	7.29e-85	80.63	RING-H2 finger protein ATL39-like [Cucurbita maxima]	[more]
XP_022936829.1	2.97e-84	80.00	RING-H2 finger protein ATL39-like [Cucurbita moschata]	[more]

BLAST of MELO3C016704.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C034	8.9e-12	31.37	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q9XF63	8.9e-12	57.45	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]
Q9LS99	1.2e-11	54.17	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]
P0C035	5.7e-11	48.98	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]
Q6NML0	7.5e-11	52.08	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ...	[more]

BLAST of MELO3C016704.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9M0	1.02e-110	99.37	RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BVC7	1.02e-110	99.37	RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 S...	[more]
A0A5A7VAT0	3.96e-110	99.37	RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0L062	9.40e-107	94.97	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 P...	[more]
A0A6J1IG67	3.53e-85	80.63	RING-H2 finger protein ATL39-like OS=Cucurbita maxima OX=3661 GN=LOC111476945 PE...	[more]

BLAST of MELO3C016704.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49220.1	6.3e-13	31.37	RING/U-box superfamily protein	[more]
AT1G72310.1	6.3e-13	57.45	RING/U-box superfamily protein	[more]
AT3G18773.1	8.2e-13	54.17	RING/U-box superfamily protein	[more]
AT1G53820.1	4.1e-12	48.98	RING/U-box superfamily protein	[more]
AT1G49210.1	5.3e-12	52.08	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 112..153 e-value: 6.4E-7 score: 39.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 111..154 e-value: 2.3E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 112..154 score: 12.577796
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..158 e-value: 5.2E-19 score: 69.7
None	No IPR available	PANTHER	PTHR14155:SF493	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 80..157
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 80..157
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 107..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016704.jh1.t1	MELO3C016704.jh1.t1	mRNA