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MELO3C016704 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA Homology
BLAST of MELO3C016704 vs. NCBI nr
Match: KAA0064334.1 (RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]) HSP 1 Score: 320.9 bits (821), Expect = 6.4e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of MELO3C016704 vs. NCBI nr
Match: XP_008453063.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo] >TYK20253.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]) HSP 1 Score: 320.9 bits (821), Expect = 6.4e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of MELO3C016704 vs. NCBI nr
Match: XP_031740449.1 (RING-H2 finger protein ATL39-like [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 5.6e-80 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of MELO3C016704 vs. NCBI nr
Match: XP_022976597.1 (RING-H2 finger protein ATL39-like [Cucurbita maxima]) HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63 Identity = 128/160 (80.00%), Postives = 143/160 (89.38%), Query Frame = 0
BLAST of MELO3C016704 vs. NCBI nr
Match: XP_022936829.1 (RING-H2 finger protein ATL39-like [Cucurbita moschata]) HSP 1 Score: 251.5 bits (641), Expect = 4.8e-63 Identity = 127/160 (79.38%), Postives = 143/160 (89.38%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.4e-11 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.4e-11 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11 Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.8e-11 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy TrEMBL
Match: A0A5A7VAT0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00330 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy TrEMBL
Match: A0A5D3D9M0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003920 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy TrEMBL
Match: A0A1S3BVC7 (RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy TrEMBL
Match: A0A0A0L062 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of MELO3C016704 vs. ExPASy TrEMBL
Match: A0A6J1IG67 (RING-H2 finger protein ATL39-like OS=Cucurbita maxima OX=3661 GN=LOC111476945 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 7.9e-64 Identity = 128/160 (80.00%), Postives = 143/160 (89.38%), Query Frame = 0
BLAST of MELO3C016704 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0
BLAST of MELO3C016704 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of MELO3C016704 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12 Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of MELO3C016704 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 7.0e-12 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of MELO3C016704 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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