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MELO3C016677 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAGGAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTAATGAAAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTCTTAAACAGTCTGGGAAGAGGAAATCGCATGAATATGGACACGTGGGCTAGAGTTGTTGCTTTTCTTTACAAGGAGAACCTATTGGAATCCTCCAACTTAATTGACTCATTGATCAGTTGA CTAAAGGAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTAATGAAAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTCTTAAACAGTCTGGGAAGAGGAAATCGCATGAATATGGACACGTGGGCTAGAGTTGTTGCTTTTCTTTACAAGGAGAACCTATTGGAATCCTCCAACTTAATTGACTCATTGATCAGTTGA ATGATCTTCAAGGGTTATGTGCCTCGTAATGAAAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTCTTAAACAGTCTGGGAAGAGGAAATCGCATGAATATGGACACGTGGGCTAGAGTTGTTGCTTTTCTTTACAAGGAGAACCTATTGGAATCCTCCAACTTAATTGACTCATTGATCAGTTGA MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS Homology
BLAST of MELO3C016677 vs. NCBI nr
Match: KAA0064307.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20279.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C016677 vs. NCBI nr
Match: XP_008452430.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C016677 vs. NCBI nr
Match: XP_004146077.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis sativus] >KAE8649815.1 hypothetical protein Csa_012179 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 3.1e-30 Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of MELO3C016677 vs. NCBI nr
Match: XP_038898311.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27 Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of MELO3C016677 vs. NCBI nr
Match: XP_022131752.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Momordica charantia]) HSP 1 Score: 120.6 bits (301), Expect = 5.7e-24 Identity = 55/71 (77.46%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy Swiss-Prot
Match: Q9MAG8 (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05 Identity = 24/71 (33.80%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy TrEMBL
Match: A0A5A7VBA5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004190 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy TrEMBL
Match: A0A1S3BT71 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo OX=3656 GN=LOC103493464 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy TrEMBL
Match: A0A0A0KZF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622790 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30 Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy TrEMBL
Match: A0A6J1BRW9 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica charantia OX=3673 GN=LOC111004838 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24 Identity = 55/71 (77.46%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of MELO3C016677 vs. ExPASy TrEMBL
Match: A0A6J1J467 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxima OX=3661 GN=LOC111481084 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of MELO3C016677 vs. TAIR 10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 8.8e-07 Identity = 24/71 (33.80%), Postives = 43/71 (60.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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