MELO3C016620 (gene) Melon (DHL92) v4

Overview


Name	MELO3C016620
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein MNN4-like
Location	chr06: 24544441 .. 24544788 (+)
RNA-Seq Expression	MELO3C016620
Synteny	MELO3C016620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

mRNA sequence

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

Coding sequence (CDS)

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

Protein sequence

MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE

Homology

[Close]

BLAST of MELO3C016620 vs. NCBI nr
Match: KAA0025420.1 (hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK04763.1 hypothetical protein E5676_scaffold68G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
           MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61  LHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 116
           LHRIIAIHKNKAKSKHLKTKQDG         ++++RGRRSTKTQVAKARMRSEE
Sbjct: 71  LHRIIAIHKNKAKSKHLKTKQDG---------RRRDRGRRSTKTQVAKARMRSEE 116

[Close]

BLAST of MELO3C016620 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 6.0e-15
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII   + + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHII---VGVKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 116
           SS+TL+RIIAI++NKAK K+LK KQDGKS+VK+  +  K+   +       K + +SE+
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVKE--VDDKDEEEKEEDNVPLKRKRQSED 134

[Close]

BLAST of MELO3C016620 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 2   EEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVCS 61
           + +L+NIG++I+EHII    ++ +P        LI++LCLK Y  L+  PQVE+KDGV +
Sbjct: 12  KHLLVNIGEMISEHIIA---WVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWT 71

Query: 62  SSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKL 91
            +TLHRIIA+HKNKAK K  KTKQDGKS+V+K+
Sbjct: 72  VATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKV 101

[Close]

BLAST of MELO3C016620 vs. NCBI nr
Match: KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 118 MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 177

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 84
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 178 TTITLPRIIAIHKNKARLKRLKTKKEG 201

[Close]

BLAST of MELO3C016620 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 21  MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 84
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 81  TTITLPRIIAIHKNKARLKRLKTKKEG 104

[Close]

BLAST of MELO3C016620 vs. ExPASy TrEMBL
Match: A0A5A7SGZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00650 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
           MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61  LHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 116
           LHRIIAIHKNKAKSKHLKTKQDG         ++++RGRRSTKTQVAKARMRSEE
Sbjct: 71  LHRIIAIHKNKAKSKHLKTKQDG---------RRRDRGRRSTKTQVAKARMRSEE 116

[Close]

BLAST of MELO3C016620 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.9e-15
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII   + + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHII---VGVKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 116
           SS+TL+RIIAI++NKAK K+LK KQDGKS+VK+  +  K+   +       K + +SE+
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVKE--VDDKDEEEKEEDNVPLKRKRQSED 134

[Close]

BLAST of MELO3C016620 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.4e-15
Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 2   EEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVCS 61
           + +L+NIG++I+EHII    ++ +P        LI++LCLK Y  L+  PQVE+KDGV +
Sbjct: 12  KHLLVNIGEMISEHIIA---WVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWT 71

Query: 62  SSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKL 91
            +TLHRIIA+HKNKAK K  KTKQDGKS+V+K+
Sbjct: 72  VATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKV 101

[Close]

BLAST of MELO3C016620 vs. ExPASy TrEMBL
Match: A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 118 MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 177

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 84
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 178 TTITLPRIIAIHKNKARLKRLKTKKEG 201

[Close]

BLAST of MELO3C016620 vs. ExPASy TrEMBL
Match: A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 21  MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 84
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 81  TTITLPRIIAIHKNKARLKRLKTKKEG 104

The following BLAST results are available for this feature:

BLAST of MELO3C016620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025420.1	2.1e-44	88.70	hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK0476...	[more]
KAA0060282.1	6.0e-15	51.26	drebrin-like [Cucumis melo var. makuwa]	[more]
TYK11921.1	1.7e-14	53.76	hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa]	[more]
KAA0066376.1	2.5e-13	56.32	hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa]	[more]
TYK00908.1	2.5e-13	56.32	hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C016620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C016620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SGZ8	1.0e-44	88.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UWQ4	2.9e-15	51.26	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE...	[more]
A0A5D3CJD1	8.4e-15	53.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VJ48	1.2e-13	56.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BPB1	1.2e-13	56.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C016620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016620.1	MELO3C016620.1	mRNA