MELO3C016385 (gene) Melon (DHL92) v4

Overview
NameMELO3C016385
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionlate embryogenesis abundant protein D-29-like
Locationchr07: 22271016 .. 22272046 (+)
RNA-Seq ExpressionMELO3C016385
SyntenyMELO3C016385
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTGTCCGGAAATCCTCCCAACCGCACGTCATATACAATATTCAAATACCTAAATTTGTAAACTCACGATTTCACCACCCAATCTCCACTCCCATTTACCTTTTGAATTTTTATATAACTTTTTTTGTTTTTGTTGGTGGTGTGGAGGTGATTGGACTGGAGAAAAGAGAATTGTAATAATTGAAACAAGAACGGAAGAATAAAAGAATAAAGAAAGAAATAATGGGGAGGAAAATGATGACGTTAGTGGTGGCGGTGGTATTGCTGGTGTTGGTGGCGGAGAAATGCAGGGGGGATGGTGAAGATGCAGTACAAGACGTGAAGGACAGTATGAGTGAATTTGCGAAGGATGCAAAACTTGATGAAAAGGCCGAAGCTGTCAAATCTACGGCTTCTGAAGTATACAGCGATGCTAAGGACAAGGCTGAGTCCTGGTCCAACTGGGCTTACGACAAGATTTCCAAGTAACACAACTCTGTTTCTTTTCCTTTCCAATGTAATTATATTCTATTTTGGGGATATAGAATCGTAAGTCGGAAGAACAGTGAAAACAGAACTAAATGAATTTATCGTTTTTTAGATTATATTACATTATTTGTTAGATTTGTTCATTTTGAATATAAATGGGTTAAATTGGAAACAGGGGGTTAGGATTGAGCGAAGAAGAATCGAAAGAGAAAGCTCATGACGGAGCGGATAAAGCCTGATGCAGCCGTAAAAACCGCAGAAAAAACGAACATAGCAGCTTGAGGTAAATTTTGAATAAAAAAAGGCAGAACCCTAATGAATTTCATTATTATTTCATCATTATCTCTAAATAAAATTTTTGGAAAAATTATATAATATCTAAAAAAATATTTCTATTTCTTTTGGAAGAAATTGAGTTGGTAATACTCTAATGTTTAACTTGTTATAGTCTGATGTTTGGACATTTTGTGTCGAATTGTTTGGTAACATTGTTTTATTTGATTTTCCATGTTGGACTTTAAGGGGAAAAAATGGAAAATATGCTCCAAAAACTAATCATTAA

mRNA sequence

TTCTGTCCGGAAATCCTCCCAACCGCACGTCATATACAATATTCAAATACCTAAATTTGTAAACTCACGATTTCACCACCCAATCTCCACTCCCATTTACCTTTTGAATTTTTATATAACTTTTTTTGTTTTTGTTGGTGGTGTGGAGGTGATTGGACTGGAGAAAAGAGAATTGTAATAATTGAAACAAGAACGGAAGAATAAAAGAATAAAGAAAGAAATAATGGGGAGGAAAATGATGACGTTAGTGGTGGCGGTGGTATTGCTGGTGTTGGTGGCGGAGAAATGCAGGGGGGATGGTGAAGATGCAGTACAAGACGTGAAGGACAGTATGAGTGAATTTGCGAAGGATGCAAAACTTGATGAAAAGGCCGAAGCTGTCAAATCTACGGCTTCTGAAGTATACAGCGATGCTAAGGACAAGGCTGAGTCCTGGTCCAACTGGGCTTACGACAAGATTTCCAAGGGGTTAGGATTGAGCGAAGAAGAATCGAAAGAGAAAGCTCATGACGGAGCGGATAAAGCCTGATGCAGCCGTAAAAACCGCAGAAAAAACGAACATAGCAGCTTGAGGTAAATTTTGAATAAAAAAAGGCAGAACCCTAATGAATTTCATTATTATTTCATCATTATCTCTAAATAAAATTTTTGGAAAAATTATATAATATCTAAAAAAATATTTCTATTTCTTTTGGAAGAAATTGAGTTGGTAATACTCTAATGTTTAACTTGTTATAGTCTGATGTTTGGACATTTTGTGTCGAATTGTTTGGTAACATTGTTTTATTTGATTTTCCATGTTGGACTTTAAGGGGAAAAAATGGAAAATATGCTCCAAAAACTAATCATTAA

Coding sequence (CDS)

ATGGGGAGGAAAATGATGACGTTAGTGGTGGCGGTGGTATTGCTGGTGTTGGTGGCGGAGAAATGCAGGGGGGATGGTGAAGATGCAGTACAAGACGTGAAGGACAGTATGAGTGAATTTGCGAAGGATGCAAAACTTGATGAAAAGGCCGAAGCTGTCAAATCTACGGCTTCTGAAGTATACAGCGATGCTAAGGACAAGGCTGAGTCCTGGTCCAACTGGGCTTACGACAAGATTTCCAAGGGGTTAGGATTGAGCGAAGAAGAATCGAAAGAGAAAGCTCATGACGGAGCGGATAAAGCCTGA

Protein sequence

MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEVYSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA
Homology
[Close]
BLAST of MELO3C016385 vs. NCBI nr
Match: XP_008452082.1 (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo] >KAA0044798.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa] >TYK16666.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 9.1e-44
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 101

[Close]
BLAST of MELO3C016385 vs. NCBI nr
Match: XP_008452083.1 (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo] >KAA0044797.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa] >TYK16667.1 late embryogenesis abundant protein D-29-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-32
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRK  TLVVAVV LVLVAEKC G GE AV+DVKD++SE A+DAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKTATLVVAVVWLVLVAEKCSGYGE-AVRDVKDNVSEIAEDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSE+E KE AH+ ADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEKELKETAHNVADKA 100

[Close]
BLAST of MELO3C016385 vs. NCBI nr
Match: XP_004146555.1 (late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN53305.1 hypothetical protein Csa_015110 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29
Identity = 77/101 (76.24%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRK  TLVVAVV LVLVAEKC G GE+AV+DVK++MSE A+ A LDEKAEAVKS ASEV
Sbjct: 1   MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           Y++AKDK ESWSNWAY+KIS+GLGL+EEE KE AH+ ADKA
Sbjct: 61  YTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADKA 101

[Close]
BLAST of MELO3C016385 vs. NCBI nr
Match: XP_038906272.1 (late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 4.3e-25
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGR  M  VVAVV L+LVA+KCRG GE+A+QDVKD++SE  KD  LDEKAEAVKS AS+V
Sbjct: 1   MGRTSMLSVVAVVWLLLVADKCRGMGEEALQDVKDNVSEITKDTSLDEKAEAVKSGASDV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           + DAK+ AESWSNWAY KISKGLG + EE KE AH   DKA
Sbjct: 61  FHDAKENAESWSNWAYGKISKGLGFNGEELKETAHYVVDKA 101

[Close]
BLAST of MELO3C016385 vs. NCBI nr
Match: XP_038906279.1 (late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 4.3e-25
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGR  M  VVAVV L+LVA+KCRG GE+A+QDVKD++SE  KD  LDEKAEAVKS AS+V
Sbjct: 1   MGRTSMLSVVAVVWLLLVADKCRGMGEEALQDVKDNVSEITKDTSLDEKAEAVKSGASDV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           + DAK+ AESWSNWAY KISKGLG + EE KE AH   DKA
Sbjct: 61  FHDAKENAESWSNWAYGKISKGLGFNGEELKETAHYVVDKA 101

[Close]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match: A0A5D3D1U2 (Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004970 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 101

[Close]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match: A0A1S3BSF4 (late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC103493194 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 101

[Close]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match: A0A5A7TSE6 (Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004980 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRK  TLVVAVV LVLVAEKC G GE AV+DVKD++SE A+DAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKTATLVVAVVWLVLVAEKCSGYGE-AVRDVKDNVSEIAEDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSE+E KE AH+ ADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEKELKETAHNVADKA 100

[Close]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match: A0A1S3BT31 (late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC103493195 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRK  TLVVAVV LVLVAEKC G GE AV+DVKD++SE A+DAKLDEKAEAVKSTASEV
Sbjct: 1   MGRKTATLVVAVVWLVLVAEKCSGYGE-AVRDVKDNVSEIAEDAKLDEKAEAVKSTASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           YSDAKDKAESWSNWAYDKISKGLGLSE+E KE AH+ ADKA
Sbjct: 61  YSDAKDKAESWSNWAYDKISKGLGLSEKELKETAHNVADKA 100

[Close]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match: A0A0A0KUJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046680 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-29
Identity = 77/101 (76.24%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 1   MGRKMMTLVVAVVLLVLVAEKCRGDGEDAVQDVKDSMSEFAKDAKLDEKAEAVKSTASEV 60
           MGRK  TLVVAVV LVLVAEKC G GE+AV+DVK++MSE A+ A LDEKAEAVKS ASEV
Sbjct: 1   MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEV 60

Query: 61  YSDAKDKAESWSNWAYDKISKGLGLSEEESKEKAHDGADKA 102
           Y++AKDK ESWSNWAY+KIS+GLGL+EEE KE AH+ ADKA
Sbjct: 61  YTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADKA 101

The following BLAST results are available for this feature:
BLAST of MELO3C016385 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452082.19.1e-44100.00PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo] >KAA0044... [more]
XP_008452083.16.1e-3284.16PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo] >KAA0044... [more]
XP_004146555.12.9e-2976.24late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN53305.1 hypotheti... [more]
XP_038906272.14.3e-2569.31late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida][more]
XP_038906279.14.3e-2569.31late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida][more]
BLAST of MELO3C016385 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1U24.4e-44100.00Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3BSF44.4e-44100.00late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A5A7TSE63.0e-3284.16Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3BT313.0e-3284.16late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A0A0KUJ51.4e-2976.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046680 PE=4 SV=1[more]
BLAST of MELO3C016385 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016385.1MELO3C016385.1mRNA