MELO3C016347.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016347.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	nuclear transcription factor Y subunit C-1-like
Location	chr07: 22947965 .. 22948318 (+)
RNA-Seq Expression	MELO3C016347.jh1
Synteny	MELO3C016347.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAAGCAGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCACTCGCTGCCGTTAGCGAGGATAAAGAAGATCATGAAGAAATCGGGAGAGGAGGTGAAGATGATCTCCGGTGAGGCTCCGATCGTGTTCTCGAAGGCGTGTGAATTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATTGCGATGCAGAGTAAGAAGAGGATGCTTCATAAAGAGGATGTGGCTTCCGCTATTCTGGCGACGGATGTTTTCGATTTTCTGATCGGATTGATCTTCAATGAAACCGCCGCCACCGCGGGAGATGTTGGTGAAAGTGAAAATATTTCGGTAGGTTGTTGA

mRNA sequence

ATGAGGCAAGCAGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCACTCGCTGCCGTTAGCGAGGATAAAGAAGATCATGAAGAAATCGGGAGAGGAGGTGAAGATGATCTCCGGTGAGGCTCCGATCGTGTTCTCGAAGGCGTGTGAATTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATTGCGATGCAGAGTAAGAAGAGGATGCTTCATAAAGAGGATGTGGCTTCCGCTATTCTGGCGACGGATGTTTTCGATTTTCTGATCGGATTGATCTTCAATGAAACCGCCGCCACCGCGGGAGATGTTGGTGAAAGTGAAAATATTTCGGTAGGTTGTTGA

Coding sequence (CDS)

ATGAGGCAAGCAGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCACTCGCTGCCGTTAGCGAGGATAAAGAAGATCATGAAGAAATCGGGAGAGGAGGTGAAGATGATCTCCGGTGAGGCTCCGATCGTGTTCTCGAAGGCGTGTGAATTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATTGCGATGCAGAGTAAGAAGAGGATGCTTCATAAAGAGGATGTGGCTTCCGCTATTCTGGCGACGGATGTTTTCGATTTTCTGATCGGATTGATCTTCAATGAAACCGCCGCCACCGCGGGAGATGTTGGTGAAAGTGAAAATATTTCGGTAGGTTGTTGA

Protein sequence

MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC

Homology

[Close]

BLAST of MELO3C016347.jh1 vs. NCBI nr
Match: XP_008452022.1 (PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis melo] >KAA0044837.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa] >TYK16627.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (593), Expect = 5.40e-77
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of MELO3C016347.jh1 vs. NCBI nr
Match: XP_004146566.1 (nuclear transcription factor Y subunit C-3 [Cucumis sativus] >KGN53346.1 hypothetical protein Csa_014665 [Cucumis sativus])

HSP 1 Score: 221 bits (562), Expect = 3.09e-72
Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA--ATAGDVGESENISVGC 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA  A  GD+GESE ISVGC
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATPAATGDLGESETISVGC 119

[Close]

BLAST of MELO3C016347.jh1 vs. NCBI nr
Match: XP_038877432.1 (nuclear transcription factor Y subunit C-1-like [Benincasa hispida])

HSP 1 Score: 214 bits (546), Expect = 9.71e-70
Identity = 110/123 (89.43%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA------ATAGDVGESENIS 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA      A  GD+ ESEN+S
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATATAAAAAGGDLAESENMS 120

[Close]

BLAST of MELO3C016347.jh1 vs. NCBI nr
Match: XP_023552994.1 (nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (516), Expect = 4.43e-65
Identity = 103/119 (86.55%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET----AATAGDVGESENISV 115
           RSWMIAMQSKKRMLHKEDVASAILATD+FDFLIGLIF+ET    A+ AGD+ ESE +S+
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTPAASAAGDLAESETMSI 119

[Close]

BLAST of MELO3C016347.jh1 vs. NCBI nr
Match: XP_022985461.1 (nuclear transcription factor Y subunit C-4-like [Cucurbita maxima])

HSP 1 Score: 199 bits (506), Expect = 1.64e-63
Identity = 102/122 (83.61%), Postives = 109/122 (89.34%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-------AATAGDVGESENI 115
           RSWMIAM SKKRMLHKEDVASAILATD+FDFLIGLIF+ET       A+ AGD+ ESE +
Sbjct: 61  RSWMIAMHSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASASAAGDLPESETM 120

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAP++F+KACELFI ELT RSW+ A ++K+R L + 
Sbjct: 68  HQLPLARIKKIM-KADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRN 127

Query: 78  DVASAILATDVFDFLIGLIFNETA 102
           DVA+AI  TDVFDFL+ ++  E A
Sbjct: 128 DVAAAIARTDVFDFLVDIVPREEA 150

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-21
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+AI  TD+FDFL+ ++  E
Sbjct: 137 DIAAAITRTDIFDFLVDIVPRE 157

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-21
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 64  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 123

Query: 78  DVASAILATDVFDFLIGLI 97
           D+A+AI  TD+FDFL+ ++
Sbjct: 124 DIAAAITRTDIFDFLVDIV 141

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20
Identity = 48/79 (60.76%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           HSLPLARIKKIM K+ E+V+MIS EAP++F+KACE+FI ELT RSWM   ++K+R L K 
Sbjct: 100 HSLPLARIKKIM-KADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKN 159

Query: 78  DVASAILATDVFDFLIGLI 97
           D+A+AI  TD++DFL+ ++
Sbjct: 160 DIAAAITRTDMYDFLVDIV 177

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-20
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 69  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 128

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 129 DIAAAVTRTDIFDFLVDIVPRE 149

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TSI3 (Nuclear transcription factor Y subunit C-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004550 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 2.62e-77
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BSA0 (nuclear transcription factor Y subunit C-1-like OS=Cucumis melo OX=3656 GN=LOC103493153 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 2.62e-77
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KZN6 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049050 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.50e-72
Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA--ATAGDVGESENISVGC 117
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA  A  GD+GESE ISVGC
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATPAATGDLGESETISVGC 119

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J883 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita maxima OX=3661 GN=LOC111483463 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 7.92e-64
Identity = 102/122 (83.61%), Postives = 109/122 (89.34%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFIEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-------AATAGDVGESENI 115
           RSWMIAM SKKRMLHKEDVASAILATD+FDFLIGLIF+ET       A+ AGD+ ESE +
Sbjct: 61  RSWMIAMHSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASASAAGDLPESETM 120

[Close]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EZM2 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita moschata OX=3662 GN=LOC111437669 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 3.02e-63
Identity = 100/120 (83.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELF+EELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFVEELTK 60

Query: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-----AATAGDVGESENISV 115
           RSWMIAMQSKKRMLHKEDVASAILATD+FDFLIGLIF+ET     A+ A ++ ESE +S+
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASAAAELPESETMSI 120

[Close]

BLAST of MELO3C016347.jh1 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+AI  TD+FDFL+ ++  E
Sbjct: 137 DIAAAITRTDIFDFLVDIVPRE 157

[Close]

BLAST of MELO3C016347.jh1 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+AI  TD+FDFL+ ++  E
Sbjct: 137 DIAAAITRTDIFDFLVDIVPRE 157

[Close]

BLAST of MELO3C016347.jh1 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 101.3 bits (251), Expect = 5.5e-22
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 64  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 123

Query: 78  DVASAILATDVFDFLIGLI 97
           D+A+AI  TD+FDFL+ ++
Sbjct: 124 DIAAAITRTDIFDFLVDIV 141

[Close]

BLAST of MELO3C016347.jh1 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 79  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 138

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 139 DIAAAVTRTDIFDFLVDIVPRE 159

[Close]

BLAST of MELO3C016347.jh1 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 18  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 77
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 69  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 128

Query: 78  DVASAILATDVFDFLIGLIFNE 100
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 129 DIAAAVTRTDIFDFLVDIVPRE 149

The following BLAST results are available for this feature:

BLAST of MELO3C016347.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452022.1	5.40e-77	100.00	PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis melo] >KAA00...	[more]
XP_004146566.1	3.09e-72	94.96	nuclear transcription factor Y subunit C-3 [Cucumis sativus] >KGN53346.1 hypothe...	[more]
XP_038877432.1	9.71e-70	89.43	nuclear transcription factor Y subunit C-1-like [Benincasa hispida]	[more]
XP_023552994.1	4.43e-65	86.55	nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985461.1	1.64e-63	83.61	nuclear transcription factor Y subunit C-4-like [Cucurbita maxima]	[more]

BLAST of MELO3C016347.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6BLW4	3.4e-21	61.90	Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9FMV5	4.5e-21	62.20	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	7.7e-21	63.29	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	1.3e-20	60.76	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9ZVL3	2.9e-20	58.54	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of MELO3C016347.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSI3	2.62e-77	100.00	Nuclear transcription factor Y subunit C-1-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BSA0	2.62e-77	100.00	nuclear transcription factor Y subunit C-1-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KZN6	1.50e-72	94.96	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0490...	[more]
A0A6J1J883	7.92e-64	83.61	nuclear transcription factor Y subunit C-4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EZM2	3.02e-63	83.33	nuclear transcription factor Y subunit C-4-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C016347.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63470.1	3.2e-22	62.20	nuclear factor Y, subunit C4	[more]
AT5G63470.2	3.2e-22	62.20	nuclear factor Y, subunit C4	[more]
AT3G48590.1	5.5e-22	63.29	nuclear factor Y, subunit C1	[more]
AT1G08970.4	2.1e-21	58.54	nuclear factor Y, subunit C9	[more]
AT1G54830.2	2.1e-21	58.54	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 11..96 e-value: 1.2E-30 score: 108.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 15..92
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 19..83 e-value: 2.5E-18 score: 66.1
None	No IPR available	PANTHER	PTHR10252:SF41	HAP5 SUBUNIT OF HAP COMPLEX	coord: 1..102
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016347.jh1.t1	MELO3C016347.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046982	protein heterodimerization activity