Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGCGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGATGTGGATGAGGTGGAGGTTGATGTATAAGTGA
mRNA sequence
ATGAAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGCGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGATGTGGATGAGGTGGAGGTTGATGTATAAGTGA
Coding sequence (CDS)
ATGAAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGCGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGATGTGGATGA
Protein sequence
MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGGGGDSGSGDGGGGGCGGGGCGGCGGGCGGGCG
Homology
BLAST of MELO3C016146.jh1 vs. NCBI nr
Match:
KGN53550.1 (hypothetical protein Csa_015259 [Cucumis sativus])
HSP 1 Score: 167 bits (424), Expect = 5.85e-51
Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
MKTY IVLIA GSVI AVMILWCVCKFGRSRKKKTITYN+PK TPQR+LDIERGQLPKNN
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNN 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGGGGDSGSGD----GGGGGCGGGGCGG 120
NNGGMTILGGAAAGLATAAVVT LSSSGGGGGG DSGSG GGGGGC GGGCGG
Sbjct: 61 NNGGMTILGGAAAGLATAAVVTTLSSSGGGGGG----DSGSGGDGDGGGGGGC-GGGCGG 120
Query: 121 CGGGCGGGCG 126
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 125
BLAST of MELO3C016146.jh1 vs. NCBI nr
Match:
KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 115 bits (287), Expect = 4.20e-30
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M+TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGGGGDSGSGDGGGGGCGGGGCGG 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGGGGG+ G GDGGGGGCGGG GG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGGGEEGGGDGGGGGCGGGCGGG 120
Query: 121 CGGGCGGGCG 126
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 126
BLAST of MELO3C016146.jh1 vs. NCBI nr
Match:
XP_038889436.1 (acanthoscurrin-1-like [Benincasa hispida])
HSP 1 Score: 110 bits (274), Expect = 3.22e-28
Identity = 88/130 (67.69%), Postives = 95/130 (73.08%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
MKTYGIVLI CGSVIA +MIL CVCKFG + KT+TY IP QR+ D+ERGQ N
Sbjct: 1 MKTYGIVLITCGSVIAGIMILRCVCKFGGRKIMKTVTY-IPNAASQRNPDLERGQ--PNK 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSS----GGGGGGGGGGDSGSGDGGGGGCGGGGCGG 120
NNGG+TIL GAAAGLATAAVVTNL + GGG GGG GGDSG G CGGGGCGG
Sbjct: 61 NNGGITILAGAAAGLATAAVVTNLGNDDTGGGGGCGGGEGGDSGGG------CGGGGCGG 119
Query: 121 CGGGCGGGCG 126
GGCGGGCG
Sbjct: 121 --GGCGGGCG 119
BLAST of MELO3C016146.jh1 vs. NCBI nr
Match:
XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 108 bits (269), Expect = 2.32e-27
Identity = 87/132 (65.91%), Postives = 99/132 (75.00%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M+TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGG--GGGDSGSGDGGGGGCGGGGC 120
NGGMTIL GAAAGLATAAVVT+LS+ GGGGGGG GGGD G GDGGGG CGGG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGEEGGGDGGGGDGGGG-CGGGCG 120
Query: 121 GGCGGGCGGGCG 126
GGCGGGCGGGCG
Sbjct: 121 GGCGGGCGGGCG 127
BLAST of MELO3C016146.jh1 vs. NCBI nr
Match:
XP_022931328.1 (glycine-rich protein 5-like [Cucurbita moschata])
HSP 1 Score: 105 bits (261), Expect = 3.88e-26
Identity = 85/132 (64.39%), Postives = 98/132 (74.24%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M+TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGG--GGDSGSGDGGGGGCGGGGC 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGGG GG GSG GGGGCGGG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGCGGGCG 120
Query: 121 GGCGGGCGGGCG 126
GGCGGGCGGGCG
Sbjct: 121 GGCGGGCGGGCG 128
BLAST of MELO3C016146.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0KVE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1)
HSP 1 Score: 167 bits (424), Expect = 2.83e-51
Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
MKTY IVLIA GSVI AVMILWCVCKFGRSRKKKTITYN+PK TPQR+LDIERGQLPKNN
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNN 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGGGGDSGSGD----GGGGGCGGGGCGG 120
NNGGMTILGGAAAGLATAAVVT LSSSGGGGGG DSGSG GGGGGC GGGCGG
Sbjct: 61 NNGGMTILGGAAAGLATAAVVTTLSSSGGGGGG----DSGSGGDGDGGGGGGC-GGGCGG 120
Query: 121 CGGGCGGGCG 126
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 125
BLAST of MELO3C016146.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1)
HSP 1 Score: 105 bits (261), Expect = 1.88e-26
Identity = 85/132 (64.39%), Postives = 98/132 (74.24%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M+TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGG--GGDSGSGDGGGGGCGGGGC 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGGG GG GSG GGGGCGGG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGCGGGCG 120
Query: 121 GGCGGGCGGGCG 126
GGCGGGCGGGCG
Sbjct: 121 GGCGGGCGGGCG 128
BLAST of MELO3C016146.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1)
HSP 1 Score: 103 bits (258), Expect = 5.20e-26
Identity = 85/131 (64.89%), Postives = 97/131 (74.05%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTI----TYNIPKPTPQRSLDIERGQL 60
M+TY IVLI G VIA+ +ILWCVC +G +KKKT T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGG-GGDSGSGDGGGGGCGGGGCG 120
NGGMTIL GAAAGLATAAVVT+LS+ GGGGGGGG GGD G G GGGGCGGG G
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGGEGGDDGGGGDGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCG 126
GCGGGCGGGCG
Sbjct: 121 GCGGGCGGGCG 127
BLAST of MELO3C016146.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3YHZ0 (zinc finger protein ZIC 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107776358 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 1.23e-17
Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNI-----PKPTPQRSLDIERGQ 60
MK Y I LI CGSV A V+IL C+CK GR +K + T N+ P P Q + D+E+G+
Sbjct: 1 MKAYAIALIVCGSVAALVLILCCLCKGGRKKKSQPATRNVTGFAPPPPPLQANRDVEKGE 60
Query: 61 L-PKNN---NNGGMTILGGAAAGLATAAVVTNLSSSGGGGG------GGGGGDSGSGDGG 119
+ PK+ +GGM ILG AA +ATAAV+T+ S GGGGG GGG G G G GG
Sbjct: 61 ITPKSTAVTKDGGMVILGATAATVATAAVITSAYSGGGGGGTSGSGGGGGCGSGGGGCGG 120
BLAST of MELO3C016146.jh1 vs. ExPASy TrEMBL
Match:
A0A1U7W9C4 (zinc finger protein ZIC 2-like OS=Nicotiana sylvestris OX=4096 GN=LOC104221816 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 2.76e-15
Identity = 72/132 (54.55%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 1 MKTYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNI-----PKPTPQRSLDIERGQ 60
MK Y I LI CGSV A V+IL C+CK GR +K + T N+ P P Q + D+E+G+
Sbjct: 1 MKAYAIALIVCGSVAALVLILCCLCKGGRKKKSQPATRNVTGFAPPPPPLQANRDVEKGE 60
Query: 61 L-PKNN---NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGGGGDSGSGDGGGGGCGG 120
+ PK+ +GGM ILG AA +ATAAV+T+ S GGGGGG SGSG GGG G GG
Sbjct: 61 ITPKSTAVTKDGGMVILGATAATVATAAVITSAYS-----GGGGGGTSGSGGGGGCGSGG 120
Query: 121 GGCGGCGGGCGG 123
GGCGG GGGCGG
Sbjct: 121 GGCGG-GGGCGG 126
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN53550.1 | 5.85e-51 | 86.92 | hypothetical protein Csa_015259 [Cucumis sativus] | [more] |
KAG6577050.1 | 4.20e-30 | 66.15 | hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038889436.1 | 3.22e-28 | 67.69 | acanthoscurrin-1-like [Benincasa hispida] | [more] |
XP_023552868.1 | 2.32e-27 | 65.91 | glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022931328.1 | 3.88e-26 | 64.39 | glycine-rich protein 5-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KVE1 | 2.83e-51 | 86.92 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1 | [more] |
A0A6J1EY84 | 1.88e-26 | 64.39 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 S... | [more] |
A0A6J1J409 | 5.20e-26 | 64.89 | glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=... | [more] |
A0A1S3YHZ0 | 1.23e-17 | 53.73 | zinc finger protein ZIC 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107776358 PE=4... | [more] |
A0A1U7W9C4 | 2.76e-15 | 54.55 | zinc finger protein ZIC 2-like OS=Nicotiana sylvestris OX=4096 GN=LOC104221816 P... | [more] |
Match Name | E-value | Identity | Description | |