MELO3C016057 (gene) Melon (DHL92) v4

Overview
NameMELO3C016057
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 31980537 .. 31980875 (+)
RNA-Seq ExpressionMELO3C016057
SyntenyMELO3C016057
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

mRNA sequence

ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Coding sequence (CDS)

ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Protein sequence

MPPIIKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLMGSE
Homology
BLAST of MELO3C016057 vs. NCBI nr
Match: KGN45443.2 (hypothetical protein Csa_016459 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-27
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 32  MAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMT 91
           MAPNSPIGMFQM E ++QVVEN+NGY+YSFEQK+VKKRARRS K+AEGPSPSMANR+RMT
Sbjct: 1   MAPNSPIGMFQMTE-YQQVVENKNGYRYSFEQKIVKKRARRSKKEAEGPSPSMANRSRMT 60

Query: 92  WFDIKSLLCLCIVFGLLM 110
           WFDI+SLLC+CIVFGLLM
Sbjct: 61  WFDIQSLLCMCIVFGLLM 77

BLAST of MELO3C016057 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMF-----QMMELHKQVVENENGYQY 64
           IKSLISIALLALLLLS      A DH +AP+    +F     Q  E H QV EN  GYQY
Sbjct: 93  IKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERH-QVAENGIGYQY 152

Query: 65  SFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           SFEQK +++RARR+V++AEGPSPS AN ++ + F + SLLCLC VFGL +
Sbjct: 153 SFEQK-IRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLFL 200

BLAST of MELO3C016057 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-17
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMEL----HKQVVENENGYQYS 64
           IKSLISIALLALLLL       A DH +AP+   G+F++  L      QV EN  G QYS
Sbjct: 66  IKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYS 125

Query: 65  FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           FEQK +++RARR+V++AEGPSPS AN +R + F + SLLCLC VFGL +
Sbjct: 126 FEQK-IRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLFL 173

BLAST of MELO3C016057 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMF-----QMMELHKQVVENENGYQY 64
           IKSLISIALLALLLLS      A DH +AP+   G+F     Q  E H QV EN  GYQY
Sbjct: 4   IKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERH-QVAENGIGYQY 63

Query: 65  SFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLC 103
           SFEQK +++RARR+V++AEGPSPS AN +R + F I SLLCLC
Sbjct: 64  SFEQK-IRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLC 104

BLAST of MELO3C016057 vs. NCBI nr
Match: KGN44885.1 (hypothetical protein Csa_016613 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 6.0e-04
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0

Query: 1   MPPIIKSLISIALLA-LLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENE---NG 60
           M  IIK L+SIAL+A LLLLS+  ST  VDH+   NS      ++    QV +     NG
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNS--NNIMLLRKSLQVTDGHQIANG 60

Query: 61  YQYSFEQKVVKK-RARRSVKKAEGPS-PSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           YQ S + +  KK   +   KKA  P+  S+ANR     F + SLLC  IV+GL +
Sbjct: 61  YQNSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 113

BLAST of MELO3C016057 vs. ExPASy TrEMBL
Match: A0A0A0K934 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0

Query: 1  MPPIIKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENENGYQYS 60
          MPP IKSLIS+ALLALLLLSR  ST AV+H+MAPNSPIGMFQM E ++QVVEN+NGY+YS
Sbjct: 1  MPPFIKSLISVALLALLLLSRFPSTSAVNHNMAPNSPIGMFQMTE-YQQVVENKNGYRYS 60

Query: 61 FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDI 96
          FEQK+VKKRARRS K+AEGPSPSMANR+RMT F I
Sbjct: 61 FEQKIVKKRARRSKKEAEGPSPSMANRSRMTCFII 94

BLAST of MELO3C016057 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMF-----QMMELHKQVVENENGYQY 64
           IKSLISIALLALLLLS      A DH +AP+    +F     Q  E H QV EN  GYQY
Sbjct: 93  IKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERH-QVAENGIGYQY 152

Query: 65  SFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           SFEQK +++RARR+V++AEGPSPS AN ++ + F + SLLCLC VFGL +
Sbjct: 153 SFEQK-IRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLFL 200

BLAST of MELO3C016057 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.3e-17
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMEL----HKQVVENENGYQYS 64
           IKSLISIALLALLLL       A DH +AP+   G+F++  L      QV EN  G QYS
Sbjct: 66  IKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYS 125

Query: 65  FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           FEQK +++RARR+V++AEGPSPS AN +R + F + SLLCLC VFGL +
Sbjct: 126 FEQK-IRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLFL 173

BLAST of MELO3C016057 vs. ExPASy TrEMBL
Match: A0A0A0K580 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394050 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-04
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0

Query: 1   MPPIIKSLISIALLA-LLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENE---NG 60
           M  IIK L+SIAL+A LLLLS+  ST  VDH+   NS      ++    QV +     NG
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNS--NNIMLLRKSLQVTDGHQIANG 60

Query: 61  YQYSFEQKVVKK-RARRSVKKAEGPS-PSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           YQ S + +  KK   +   KKA  P+  S+ANR     F + SLLC  IV+GL +
Sbjct: 61  YQNSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN45443.21.0e-2784.62hypothetical protein Csa_016459 [Cucumis sativus][more]
XP_022954099.12.8e-1757.27uncharacterized protein LOC111456466 [Cucurbita moschata][more]
XP_022992473.14.7e-1755.96uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
KAG6575858.11.1e-1660.19hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN44885.16.0e-0441.74hypothetical protein Csa_016613 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9341.2e-2980.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1[more]
A0A6J1GRX21.3e-1757.27uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A6J1JZB12.3e-1755.96uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A0A0K5802.9e-0441.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016057.1MELO3C016057.1mRNA